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Protein
Submitted name:

DNA-directed RNA polymerase subunit F

Gene

ORF-c20_042

Organism
Sulfolobus solfataricus
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Transcription

Names & Taxonomyi

Protein namesi
Submitted name:
DNA-directed RNA polymerase subunit FImported
Submitted name:
Putative uncharacterized protein ORF-c20_042Imported
Gene namesi
Name:ORF-c20_042Imported
ORF Names:SSOP1_0775Imported, SULA_1833Imported, SULB_1834Imported, SULC_1832Imported
OrganismiSulfolobus solfataricusImported
Taxonomic identifieri2287 [NCBI]
Taxonomic lineageiArchaeaCrenarchaeotaThermoproteiSulfolobalesSulfolobaceaeSulfolobus
Proteomesi
  • UP000033057 Componenti: Chromosome
  • UP000076770 Componenti: Chromosome i
  • UP000033085 Componenti: Chromosome
  • UP000033106 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

DNA-directed RNA polymeraseImported

Interactioni

Protein-protein interaction databases

STRINGi273057.SSO0751.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2PMZX-ray3.40F/U1-113[»]
3HKZX-ray3.40F/R1-113[»]
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ9UXD9.

Family & Domainsi

Phylogenomic databases

eggNOGiarCOG01016. Archaea.
COG1460. LUCA.
KOiK03051.

Family and domain databases

Gene3Di1.10.150.80. 1 hit.
InterProiIPR010997. HRDC-like.
IPR002121. HRDC_dom.
IPR005574. RNA_pol_II_Rpb4.
IPR010924. RNAP_F.
[Graphical view]
PfamiPF03874. RNA_pol_Rpb4. 1 hit.
[Graphical view]
PIRSFiPIRSF005053. RNA_pol_F_arch. 1 hit.
SUPFAMiSSF47819. SSF47819. 1 hit.

Sequencei

Sequence statusi: Complete.

Q9UXD9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSSVYIVEEH YIPYSVAKKL LTDVIRSGGS SNLLQRTYDY LNSVEKCDAE
60 70 80 90 100
SAQKVIEELS NIVSREDVRA ILASICPTTS DEVRSILVMD TNKTYTSEDI
110
QKIIDIIRKY IKS
Length:113
Mass (Da):12,811
Last modified:May 1, 2000 - v1
Checksum:iDB070B2E7E4843DC
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP011055 Genomic DNA. Translation: AKA74073.1.
CP011056 Genomic DNA. Translation: AKA76770.1.
CP011057 Genomic DNA. Translation: AKA79464.1.
Y18930 Genomic DNA. Translation: CAB57552.1.
LT549890 Genomic DNA. Translation: SAI84329.1.
PIRiG90223.
RefSeqiWP_009991330.1. NZ_LT549890.1.

Genome annotation databases

EnsemblBacteriaiAKA74073; AKA74073; SULB_1834.
AKA76770; AKA76770; SULC_1832.
AKA79464; AKA79464; SULA_1833.
GeneIDi27427070.
KEGGissoa:SULA_1833.
ssof:SULC_1832.
ssol:SULB_1834.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP011055 Genomic DNA. Translation: AKA74073.1.
CP011056 Genomic DNA. Translation: AKA76770.1.
CP011057 Genomic DNA. Translation: AKA79464.1.
Y18930 Genomic DNA. Translation: CAB57552.1.
LT549890 Genomic DNA. Translation: SAI84329.1.
PIRiG90223.
RefSeqiWP_009991330.1. NZ_LT549890.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2PMZX-ray3.40F/U1-113[»]
3HKZX-ray3.40F/R1-113[»]
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi273057.SSO0751.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAKA74073; AKA74073; SULB_1834.
AKA76770; AKA76770; SULC_1832.
AKA79464; AKA79464; SULA_1833.
GeneIDi27427070.
KEGGissoa:SULA_1833.
ssof:SULC_1832.
ssol:SULB_1834.

Phylogenomic databases

eggNOGiarCOG01016. Archaea.
COG1460. LUCA.
KOiK03051.

Miscellaneous databases

EvolutionaryTraceiQ9UXD9.

Family and domain databases

Gene3Di1.10.150.80. 1 hit.
InterProiIPR010997. HRDC-like.
IPR002121. HRDC_dom.
IPR005574. RNA_pol_II_Rpb4.
IPR010924. RNAP_F.
[Graphical view]
PfamiPF03874. RNA_pol_Rpb4. 1 hit.
[Graphical view]
PIRSFiPIRSF005053. RNA_pol_F_arch. 1 hit.
SUPFAMiSSF47819. SSF47819. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiQ9UXD9_SULSF
AccessioniPrimary (citable) accession number: Q9UXD9
Entry historyi
Integrated into UniProtKB/TrEMBL: May 1, 2000
Last sequence update: May 1, 2000
Last modified: July 6, 2016
This is version 98 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.