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Protein

Ribonuclease P/MRP protein subunit POP5

Gene

SPCC830.09c

Organism
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends. Also a component of RNase MRP, which cleaves pre-rRNA sequences (By similarity).By similarity

Catalytic activityi

Endonucleolytic cleavage of RNA, removing 5'-extranucleotides from tRNA precursor.

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Hydrolase

Keywords - Biological processi

tRNA processing

Names & Taxonomyi

Protein namesi
Recommended name:
Ribonuclease P/MRP protein subunit POP5 (EC:3.1.26.5)
Gene namesi
ORF Names:SPCC830.09c
OrganismiSchizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Taxonomic identifieri284812 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaTaphrinomycotinaSchizosaccharomycetesSchizosaccharomycetalesSchizosaccharomycetaceaeSchizosaccharomyces
Proteomesi
  • UP000002485 Componenti: Chromosome III

Organism-specific databases

EuPathDBiFungiDB:SPCC830.09c.
PomBaseiSPCC830.09c.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001400141 – 139Ribonuclease P/MRP protein subunit POP5Add BLAST139

Proteomic databases

MaxQBiQ9UU90.
PRIDEiQ9UU90.

Interactioni

Protein-protein interaction databases

BioGridi275473. 1 interactor.
MINTiMINT-4711414.

Structurei

3D structure databases

ProteinModelPortaliQ9UU90.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

HOGENOMiHOG000216538.
InParanoidiQ9UU90.
KOiK03537.
OMAiVAGDCIT.
OrthoDBiEOG092C5CGB.
PhylomeDBiQ9UU90.

Family and domain databases

HAMAPiMF_00755. RNase_P_2. 1 hit.
InterProiIPR016819. RNase_P/MRP_POP5.
IPR002759. RNase_P/MRP_subunit.
[Graphical view]
PfamiPF01900. RNase_P_Rpp14. 1 hit.
[Graphical view]
PIRSFiPIRSF023803. Ribonuclease_P_prd. 1 hit.

Sequencei

Sequence statusi: Complete.

Q9UU90-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVRFKSRYLL FEVLYPEAKE FFDYPTIPSD SSITTSSLSK IIRTMVAENF
60 70 80 90 100
GDVGIGKVAS SLTVKYFSPN TSTGILRVSR QHFRLAWAAL VLIRELYGKP
110 120 130
VIIRVVRVSG TIKKAELAAI ERNKSEIHNI SLMDEPIEV
Length:139
Mass (Da):15,680
Last modified:May 1, 2000 - v1
Checksum:i3E581179B769E589
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU329672 Genomic DNA. Translation: CAB52882.1.
PIRiT41635.
RefSeqiNP_588479.1. NM_001023470.2.

Genome annotation databases

EnsemblFungiiSPCC830.09c.1; SPCC830.09c.1:pep; SPCC830.09c.
GeneIDi2538895.
KEGGispo:SPCC830.09c.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU329672 Genomic DNA. Translation: CAB52882.1.
PIRiT41635.
RefSeqiNP_588479.1. NM_001023470.2.

3D structure databases

ProteinModelPortaliQ9UU90.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi275473. 1 interactor.
MINTiMINT-4711414.

Proteomic databases

MaxQBiQ9UU90.
PRIDEiQ9UU90.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblFungiiSPCC830.09c.1; SPCC830.09c.1:pep; SPCC830.09c.
GeneIDi2538895.
KEGGispo:SPCC830.09c.

Organism-specific databases

EuPathDBiFungiDB:SPCC830.09c.
PomBaseiSPCC830.09c.

Phylogenomic databases

HOGENOMiHOG000216538.
InParanoidiQ9UU90.
KOiK03537.
OMAiVAGDCIT.
OrthoDBiEOG092C5CGB.
PhylomeDBiQ9UU90.

Miscellaneous databases

PROiQ9UU90.

Family and domain databases

HAMAPiMF_00755. RNase_P_2. 1 hit.
InterProiIPR016819. RNase_P/MRP_POP5.
IPR002759. RNase_P/MRP_subunit.
[Graphical view]
PfamiPF01900. RNase_P_Rpp14. 1 hit.
[Graphical view]
PIRSFiPIRSF023803. Ribonuclease_P_prd. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiPOP5_SCHPO
AccessioniPrimary (citable) accession number: Q9UU90
Entry historyi
Integrated into UniProtKB/Swiss-Prot: March 29, 2004
Last sequence update: May 1, 2000
Last modified: November 30, 2016
This is version 90 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Schizosaccharomyces pombe
    Schizosaccharomyces pombe: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.