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Protein

Uncharacterized transcriptional regulatory protein C139.03

Gene

SPAC139.03

Organism
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Protein inferred from homologyi

Functioni

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
DNA bindingi23 – 5129Zn(2)-C6 fungal-typePROSITE-ProRule annotationAdd
BLAST

GO - Molecular functioni

GO - Biological processi

  • positive regulation of transcription from RNA polymerase II promoter Source: GOC
  • regulation of transcription from RNA polymerase II promoter Source: PomBase
  • transcription from RNA polymerase II promoter Source: GOC
Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulation

Keywords - Ligandi

DNA-binding, Metal-binding, Zinc

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized transcriptional regulatory protein C139.03
Gene namesi
ORF Names:SPAC139.03
OrganismiSchizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Taxonomic identifieri284812 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaTaphrinomycotinaSchizosaccharomycetesSchizosaccharomycetalesSchizosaccharomycetaceaeSchizosaccharomyces
Proteomesi
  • UP000002485 Componenti: Chromosome I

Organism-specific databases

EuPathDBiFungiDB:SPAC139.03.
PomBaseiSPAC139.03.

Subcellular locationi

GO - Cellular componenti

  • cytoplasm Source: UniProtKB-KW
  • mitotic spindle Source: PomBase
  • nuclear chromatin Source: PomBase
  • nucleus Source: PomBase
Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm, Cytoskeleton, Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 625625Uncharacterized transcriptional regulatory protein C139.03PRO_0000310386Add
BLAST

Proteomic databases

MaxQBiQ9UTN0.

Interactioni

Protein-protein interaction databases

BioGridi278443. 18 interactions.
MINTiMINT-4710898.

Structurei

3D structure databases

ProteinModelPortaliQ9UTN0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Contains 1 Zn(2)-C6 fungal-type DNA-binding domain.PROSITE-ProRule annotation

Phylogenomic databases

InParanoidiQ9UTN0.
OMAiRCEMITH.
OrthoDBiEOG7VDXZK.
PhylomeDBiQ9UTN0.

Family and domain databases

Gene3Di4.10.240.10. 1 hit.
InterProiIPR007219. Transcription_factor_dom_fun.
IPR001138. Zn2-C6_fun-type_DNA-bd.
[Graphical view]
PfamiPF04082. Fungal_trans. 1 hit.
PF00172. Zn_clus. 1 hit.
[Graphical view]
SMARTiSM00906. Fungal_trans. 1 hit.
SM00066. GAL4. 1 hit.
[Graphical view]
SUPFAMiSSF57701. SSF57701. 1 hit.
PROSITEiPS00463. ZN2_CY6_FUNGAL_1. 1 hit.
PS50048. ZN2_CY6_FUNGAL_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9UTN0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSETTKSGSK KSGQTSRRAI HSCLACRRKK LKCDHGRPCS NCLKRSTIQS
60 70 80 90 100
CIYIDPGKTN YDKRFERGSE ADELIDQLLS RVSMLEKRLN EVGTKSQSDY
110 120 130 140 150
ENQQSHNLPS TPSADAETQR NIGSLSVLDD TKSQYANYSS SSHVLWHLRN
160 170 180 190 200
YHYLNLDQDI QEENDSLISP FFFRISPNES AYDYLPPKKV SDILIEQFFF
210 220 230 240 250
RCHMLINVLH RPTFYVRYND FWEKPHLRKP AFTSLLYAIY ASALLATPVE
260 270 280 290 300
VQKTWALGED ERYLQVDYHQ AFRYALASSN FLFEPDLNAL QALVLCQVVF
310 320 330 340 350
DSDRIRAPPS LVGLILHVAL CMGLHRDGSL YGLNPVISEI RRRVWANIVL
360 370 380 390 400
SDLRTSETIG YPPQIVEGNY DTRLPSALPD EIHNVDSSVI ISEATFVNII
410 420 430 440 450
TKVSRAYSKC LKVLLGIIAP NYTRLLELDR ELSNFFKELI EVNIPTSNTM
460 470 480 490 500
HERHIRLLVS YLSNRFPILL HFPFLLKKNS AQFAYSHSRA LESATLALNQ
510 520 530 540 550
LYELGSNPEY SKYSWYLWRY PPFHPCIVLL LDLLNSQKII YLDDERVVLL
560 570 580 590 600
NKIFSLFPRS SGKEHYQKAW ALLQTSRAKV WEKLGLSTVD VSTTDVRLTN
610 620
FEFFDANNLD INWDDWDAIF QHCPF
Length:625
Mass (Da):72,131
Last modified:May 1, 2000 - v1
Checksum:i6ED371EB64705799
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU329670 Genomic DNA. Translation: CAB59617.1.
PIRiT37604.
RefSeqiNP_593170.1. NM_001018567.2.

Genome annotation databases

EnsemblFungiiSPAC139.03.1; SPAC139.03.1:pep; SPAC139.03.
GeneIDi2541956.
KEGGispo:SPAC139.03.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU329670 Genomic DNA. Translation: CAB59617.1.
PIRiT37604.
RefSeqiNP_593170.1. NM_001018567.2.

3D structure databases

ProteinModelPortaliQ9UTN0.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi278443. 18 interactions.
MINTiMINT-4710898.

Proteomic databases

MaxQBiQ9UTN0.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblFungiiSPAC139.03.1; SPAC139.03.1:pep; SPAC139.03.
GeneIDi2541956.
KEGGispo:SPAC139.03.

Organism-specific databases

EuPathDBiFungiDB:SPAC139.03.
PomBaseiSPAC139.03.

Phylogenomic databases

InParanoidiQ9UTN0.
OMAiRCEMITH.
OrthoDBiEOG7VDXZK.
PhylomeDBiQ9UTN0.

Miscellaneous databases

PROiQ9UTN0.

Family and domain databases

Gene3Di4.10.240.10. 1 hit.
InterProiIPR007219. Transcription_factor_dom_fun.
IPR001138. Zn2-C6_fun-type_DNA-bd.
[Graphical view]
PfamiPF04082. Fungal_trans. 1 hit.
PF00172. Zn_clus. 1 hit.
[Graphical view]
SMARTiSM00906. Fungal_trans. 1 hit.
SM00066. GAL4. 1 hit.
[Graphical view]
SUPFAMiSSF57701. SSF57701. 1 hit.
PROSITEiPS00463. ZN2_CY6_FUNGAL_1. 1 hit.
PS50048. ZN2_CY6_FUNGAL_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "The genome sequence of Schizosaccharomyces pombe."
    Wood V., Gwilliam R., Rajandream M.A., Lyne M.H., Lyne R., Stewart A., Sgouros J.G., Peat N., Hayles J., Baker S.G., Basham D., Bowman S., Brooks K., Brown D., Brown S., Chillingworth T., Churcher C.M., Collins M.
    , Connor R., Cronin A., Davis P., Feltwell T., Fraser A., Gentles S., Goble A., Hamlin N., Harris D.E., Hidalgo J., Hodgson G., Holroyd S., Hornsby T., Howarth S., Huckle E.J., Hunt S., Jagels K., James K.D., Jones L., Jones M., Leather S., McDonald S., McLean J., Mooney P., Moule S., Mungall K.L., Murphy L.D., Niblett D., Odell C., Oliver K., O'Neil S., Pearson D., Quail M.A., Rabbinowitsch E., Rutherford K.M., Rutter S., Saunders D., Seeger K., Sharp S., Skelton J., Simmonds M.N., Squares R., Squares S., Stevens K., Taylor K., Taylor R.G., Tivey A., Walsh S.V., Warren T., Whitehead S., Woodward J.R., Volckaert G., Aert R., Robben J., Grymonprez B., Weltjens I., Vanstreels E., Rieger M., Schaefer M., Mueller-Auer S., Gabel C., Fuchs M., Duesterhoeft A., Fritzc C., Holzer E., Moestl D., Hilbert H., Borzym K., Langer I., Beck A., Lehrach H., Reinhardt R., Pohl T.M., Eger P., Zimmermann W., Wedler H., Wambutt R., Purnelle B., Goffeau A., Cadieu E., Dreano S., Gloux S., Lelaure V., Mottier S., Galibert F., Aves S.J., Xiang Z., Hunt C., Moore K., Hurst S.M., Lucas M., Rochet M., Gaillardin C., Tallada V.A., Garzon A., Thode G., Daga R.R., Cruzado L., Jimenez J., Sanchez M., del Rey F., Benito J., Dominguez A., Revuelta J.L., Moreno S., Armstrong J., Forsburg S.L., Cerutti L., Lowe T., McCombie W.R., Paulsen I., Potashkin J., Shpakovski G.V., Ussery D., Barrell B.G., Nurse P.
    Nature 415:871-880(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 972 / ATCC 24843.
  2. "ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe."
    Matsuyama A., Arai R., Yashiroda Y., Shirai A., Kamata A., Sekido S., Kobayashi Y., Hashimoto A., Hamamoto M., Hiraoka Y., Horinouchi S., Yoshida M.
    Nat. Biotechnol. 24:841-847(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: SUBCELLULAR LOCATION [LARGE SCALE ANALYSIS].

Entry informationi

Entry nameiYII3_SCHPO
AccessioniPrimary (citable) accession number: Q9UTN0
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 13, 2007
Last sequence update: May 1, 2000
Last modified: June 8, 2016
This is version 88 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Schizosaccharomyces pombe
    Schizosaccharomyces pombe: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.