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Protein

40S ribosomal protein S26-B

Gene

rps2602

Organism
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Miscellaneous

There are two genes for S26 in S.pombe.

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Enzyme and pathway databases

ReactomeiR-SPO-156827. L13a-mediated translational silencing of Ceruloplasmin expression.
R-SPO-1799339. SRP-dependent cotranslational protein targeting to membrane.
R-SPO-72689. Formation of a pool of free 40S subunits.
R-SPO-72695. Formation of the ternary complex, and subsequently, the 43S complex.
R-SPO-72702. Ribosomal scanning and start codon recognition.
R-SPO-72706. GTP hydrolysis and joining of the 60S ribosomal subunit.
R-SPO-975956. Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC).
R-SPO-975957. Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC).

Names & Taxonomyi

Protein namesi
Recommended name:
40S ribosomal protein S26-B
Gene namesi
Name:rps2602
Synonyms:rps26b
ORF Names:SPAC1805.11c
OrganismiSchizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Taxonomic identifieri284812 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaTaphrinomycotinaSchizosaccharomycetesSchizosaccharomycetalesSchizosaccharomycetaceaeSchizosaccharomyces
Proteomesi
  • UP000002485 Componenti: Chromosome I

Organism-specific databases

EuPathDBiFungiDB:SPAC1805.11c.
PomBaseiSPAC1805.11c. rps2602.

Subcellular locationi

GO - Cellular componenti

  • cytosol Source: PomBase
  • cytosolic small ribosomal subunit Source: PomBase

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002045271 – 11940S ribosomal protein S26-BAdd BLAST119

Proteomic databases

MaxQBiQ9UTG4.
PRIDEiQ9UTG4.

Interactioni

Protein-protein interaction databases

BioGridi278995. 6 interactors.
MINTiMINT-4710387.
STRINGi4896.SPAC1805.11c.1.

Structurei

3D structure databases

SMRiQ9UTG4.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

HOGENOMiHOG000108824.
InParanoidiQ9UTG4.
KOiK02976.
OMAiDKAICVT.
OrthoDBiEOG092C5TXE.
PhylomeDBiQ9UTG4.

Family and domain databases

InterProiView protein in InterPro
IPR000892. Ribosomal_S26e.
PANTHERiPTHR12538. PTHR12538. 1 hit.
PfamiView protein in Pfam
PF01283. Ribosomal_S26e. 1 hit.
PROSITEiView protein in PROSITE
PS00733. RIBOSOMAL_S26E. 1 hit.

Sequencei

Sequence statusi: Complete.

Q9UTG4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTQKRRNNGR NKHGRGHVKF VRCINCSRAV PKDKAIKRWT IRNMVETAAI
60 70 80 90 100
RDLSEASVYS EYTIPKLYIK LQYCVSCAIH SRVVRVRSRE GRRIRTPPPR
110
VRYNRDGKKV NPTAVAKNL
Length:119
Mass (Da):13,862
Last modified:May 1, 2000 - v1
Checksum:iBE48B680670C7224
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU329670 Genomic DNA. Translation: CAB55852.1.
AB029514 mRNA. Translation: BAA82318.1.
PIRiT37896.
T43515.
RefSeqiNP_593922.1. NM_001019351.2.

Genome annotation databases

EnsemblFungiiSPAC1805.11c.1; SPAC1805.11c.1:pep; SPAC1805.11c.
GeneIDi2542538.
KEGGispo:SPAC1805.11c.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Entry informationi

Entry nameiRS26B_SCHPO
AccessioniPrimary (citable) accession number: Q9UTG4
Secondary accession number(s): Q9Y8H0
Entry historyiIntegrated into UniProtKB/Swiss-Prot: August 14, 2001
Last sequence update: May 1, 2000
Last modified: July 5, 2017
This is version 112 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Schizosaccharomyces pombe
    Schizosaccharomyces pombe: entries and gene names
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families