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Protein

Protein YIP5

Gene

yip5

Organism
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

Possible role in vesicle-mediated transport. May be involved in proper membrane localization of Rab GTPases (By similarity).By similarity

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Recommended name:
Protein YIP5
Alternative name(s):
YPT-interacting protein 5
Gene namesi
Name:yip5By similarity
ORF Names:SPAC227.06
OrganismiSchizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Taxonomic identifieri284812 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaTaphrinomycotinaSchizosaccharomycetesSchizosaccharomycetalesSchizosaccharomycetaceaeSchizosaccharomyces
Proteomesi
  • UP000002485 Componenti: Chromosome I

Organism-specific databases

EuPathDBiFungiDB:SPAC227.06
PomBaseiSPAC227.06 yip5

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei87 – 107HelicalSequence analysisAdd BLAST21
Transmembranei131 – 151HelicalSequence analysisAdd BLAST21
Transmembranei164 – 184HelicalSequence analysisAdd BLAST21
Transmembranei188 – 208HelicalSequence analysisAdd BLAST21
Transmembranei228 – 248HelicalSequence analysisAdd BLAST21

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002594171 – 249Protein YIP5Add BLAST249

Proteomic databases

MaxQBiQ9UTD3
PaxDbiQ9UTD3
PRIDEiQ9UTD3

PTM databases

iPTMnetiQ9UTD3

Interactioni

Subunit structurei

Interacts with the YIP1 family members yip1 and yip4, and several Rab GTPases. The C-terminal cysteines in the Rab GTPase ypt2 are essential for the interaction. Interacts with snx3 (By similarity).By similarity

GO - Molecular functioni

Protein-protein interaction databases

BioGridi277931, 31 interactors
STRINGi4896.SPAC227.06.1

Family & Domainsi

Sequence similaritiesi

Belongs to the YIP1 family.Sequence analysis

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

HOGENOMiHOG000211701
InParanoidiQ9UTD3
OMAiELAFHEF
OrthoDBiEOG092C3H1X
PhylomeDBiQ9UTD3

Family and domain databases

InterProiView protein in InterPro
IPR006977 Yip1
PfamiView protein in Pfam
PF04893 Yip1, 1 hit

Sequencei

Sequence statusi: Complete.

Q9UTD3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAHEIEIDSE ADLGRTTFEA EDLYKQRTPI TKPPAPRLQS RRASMQETPW
60 70 80 90 100
TIKDSFNVET KDVVQRCIHT LIPTVNFFDV VDDRPDLYGP FWITTTVIQA
110 120 130 140 150
LFFSNSITEY ARYATGHGTS GYSIKKLISA ASIIYGYTTI IAVLLWGILV
160 170 180 190 200
WNKCNPKLLD CLCLYGYANI VWLPVSLATP PFGLLSTLAS HIVKYVLTGI
210 220 230 240
GLLISIVFLT RNLYPICQQA GSNLCKLLLF GIIVFHCLLA LSLQLIFFS
Length:249
Mass (Da):27,932
Last modified:May 1, 2000 - v1
Checksum:iFAD4EF21883703DC
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU329670 Genomic DNA Translation: CAB61455.1
PIRiT50162
RefSeqiNP_592960.1, NM_001018360.2

Genome annotation databases

EnsemblFungiiSPAC227.06.1; SPAC227.06.1:pep; SPAC227.06
GeneIDi2541426
KEGGispo:SPAC227.06

Similar proteinsi

Entry informationi

Entry nameiYIP5_SCHPO
AccessioniPrimary (citable) accession number: Q9UTD3
Entry historyiIntegrated into UniProtKB/Swiss-Prot: October 31, 2006
Last sequence update: May 1, 2000
Last modified: March 28, 2018
This is version 87 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome
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Main funding by: National Institutes of Health