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Protein

Protein YIP5

Gene

yip5

Organism
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Possible role in vesicle-mediated transport. May be involved in proper membrane localization of Rab GTPases (By similarity).By similarity

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Recommended name:
Protein YIP5
Alternative name(s):
YPT-interacting protein 5
Gene namesi
Name:yip5By similarity
ORF Names:SPAC227.06
OrganismiSchizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Taxonomic identifieri284812 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaTaphrinomycotinaSchizosaccharomycetesSchizosaccharomycetalesSchizosaccharomycetaceaeSchizosaccharomyces
Proteomesi
  • UP000002485 Componenti: Chromosome I

Organism-specific databases

EuPathDBiFungiDB:SPAC227.06.
PomBaseiSPAC227.06. yip5.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei87 – 10721HelicalSequence analysisAdd
BLAST
Transmembranei131 – 15121HelicalSequence analysisAdd
BLAST
Transmembranei164 – 18421HelicalSequence analysisAdd
BLAST
Transmembranei188 – 20821HelicalSequence analysisAdd
BLAST
Transmembranei228 – 24821HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

  • endoplasmic reticulum Source: PomBase
  • Golgi apparatus Source: PomBase
  • integral component of membrane Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 249249Protein YIP5PRO_0000259417Add
BLAST

Proteomic databases

MaxQBiQ9UTD3.

Interactioni

Subunit structurei

Interacts with the YIP1 family members yip1 and yip4, and several Rab GTPases. The C-terminal cysteines in the Rab GTPase ypt2 are essential for the interaction. Interacts with snx3 (By similarity).By similarity

GO - Molecular functioni

Protein-protein interaction databases

BioGridi277931. 31 interactions.
MINTiMINT-4710165.

Family & Domainsi

Sequence similaritiesi

Belongs to the YIP1 family.Sequence analysis

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

HOGENOMiHOG000211701.
InParanoidiQ9UTD3.
OMAiNSITEYA.
OrthoDBiEOG783N6S.
PhylomeDBiQ9UTD3.

Family and domain databases

InterProiIPR006977. Yip1.
[Graphical view]
PfamiPF04893. Yip1. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9UTD3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAHEIEIDSE ADLGRTTFEA EDLYKQRTPI TKPPAPRLQS RRASMQETPW
60 70 80 90 100
TIKDSFNVET KDVVQRCIHT LIPTVNFFDV VDDRPDLYGP FWITTTVIQA
110 120 130 140 150
LFFSNSITEY ARYATGHGTS GYSIKKLISA ASIIYGYTTI IAVLLWGILV
160 170 180 190 200
WNKCNPKLLD CLCLYGYANI VWLPVSLATP PFGLLSTLAS HIVKYVLTGI
210 220 230 240
GLLISIVFLT RNLYPICQQA GSNLCKLLLF GIIVFHCLLA LSLQLIFFS
Length:249
Mass (Da):27,932
Last modified:May 1, 2000 - v1
Checksum:iFAD4EF21883703DC
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU329670 Genomic DNA. Translation: CAB61455.1.
PIRiT50162.
RefSeqiNP_592960.1. NM_001018360.2.

Genome annotation databases

EnsemblFungiiSPAC227.06.1; SPAC227.06.1:pep; SPAC227.06.
GeneIDi2541426.
KEGGispo:SPAC227.06.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU329670 Genomic DNA. Translation: CAB61455.1.
PIRiT50162.
RefSeqiNP_592960.1. NM_001018360.2.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi277931. 31 interactions.
MINTiMINT-4710165.

Proteomic databases

MaxQBiQ9UTD3.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblFungiiSPAC227.06.1; SPAC227.06.1:pep; SPAC227.06.
GeneIDi2541426.
KEGGispo:SPAC227.06.

Organism-specific databases

EuPathDBiFungiDB:SPAC227.06.
PomBaseiSPAC227.06. yip5.

Phylogenomic databases

HOGENOMiHOG000211701.
InParanoidiQ9UTD3.
OMAiNSITEYA.
OrthoDBiEOG783N6S.
PhylomeDBiQ9UTD3.

Miscellaneous databases

NextBioi20802529.
PROiQ9UTD3.

Family and domain databases

InterProiIPR006977. Yip1.
[Graphical view]
PfamiPF04893. Yip1. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "The genome sequence of Schizosaccharomyces pombe."
    Wood V., Gwilliam R., Rajandream M.A., Lyne M.H., Lyne R., Stewart A., Sgouros J.G., Peat N., Hayles J., Baker S.G., Basham D., Bowman S., Brooks K., Brown D., Brown S., Chillingworth T., Churcher C.M., Collins M.
    , Connor R., Cronin A., Davis P., Feltwell T., Fraser A., Gentles S., Goble A., Hamlin N., Harris D.E., Hidalgo J., Hodgson G., Holroyd S., Hornsby T., Howarth S., Huckle E.J., Hunt S., Jagels K., James K.D., Jones L., Jones M., Leather S., McDonald S., McLean J., Mooney P., Moule S., Mungall K.L., Murphy L.D., Niblett D., Odell C., Oliver K., O'Neil S., Pearson D., Quail M.A., Rabbinowitsch E., Rutherford K.M., Rutter S., Saunders D., Seeger K., Sharp S., Skelton J., Simmonds M.N., Squares R., Squares S., Stevens K., Taylor K., Taylor R.G., Tivey A., Walsh S.V., Warren T., Whitehead S., Woodward J.R., Volckaert G., Aert R., Robben J., Grymonprez B., Weltjens I., Vanstreels E., Rieger M., Schaefer M., Mueller-Auer S., Gabel C., Fuchs M., Duesterhoeft A., Fritzc C., Holzer E., Moestl D., Hilbert H., Borzym K., Langer I., Beck A., Lehrach H., Reinhardt R., Pohl T.M., Eger P., Zimmermann W., Wedler H., Wambutt R., Purnelle B., Goffeau A., Cadieu E., Dreano S., Gloux S., Lelaure V., Mottier S., Galibert F., Aves S.J., Xiang Z., Hunt C., Moore K., Hurst S.M., Lucas M., Rochet M., Gaillardin C., Tallada V.A., Garzon A., Thode G., Daga R.R., Cruzado L., Jimenez J., Sanchez M., del Rey F., Benito J., Dominguez A., Revuelta J.L., Moreno S., Armstrong J., Forsburg S.L., Cerutti L., Lowe T., McCombie W.R., Paulsen I., Potashkin J., Shpakovski G.V., Ussery D., Barrell B.G., Nurse P.
    Nature 415:871-880(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 972 / ATCC 24843.

Entry informationi

Entry nameiYIP5_SCHPO
AccessioniPrimary (citable) accession number: Q9UTD3
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 31, 2006
Last sequence update: May 1, 2000
Last modified: November 11, 2015
This is version 75 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Schizosaccharomyces pombe
    Schizosaccharomyces pombe: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.