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Q9UTA4

- POPI_SCHPO

UniProt

Q9UTA4 - POPI_SCHPO

Protein

Ribonucleases P/MRP protein subunit pop1

Gene

pop1

Organism
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Status
Reviewed - Annotation score: 3 out of 5- Protein inferred from homologyi
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    • History
      Entry version 68 (01 Oct 2014)
      Sequence version 1 (01 May 2000)
      Previous versions | rss
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    Functioni

    Required for processing of 5.8S rRNA (short form) at site A3 and for 5' and 3' processing of pre-tRNA.By similarity

    Catalytic activityi

    Endonucleolytic cleavage of RNA, removing 5'-extranucleotides from tRNA precursor.

    GO - Molecular functioni

    1. ribonuclease P activity Source: UniProtKB-EC

    GO - Biological processi

    1. mRNA cleavage Source: PomBase
    2. RNA phosphodiester bond hydrolysis Source: GOC
    3. RNA phosphodiester bond hydrolysis, endonucleolytic Source: GOC
    4. rRNA processing Source: PomBase
    5. tRNA 5'-leader removal Source: InterPro
    6. tRNA processing Source: PomBase

    Keywords - Molecular functioni

    Hydrolase

    Keywords - Biological processi

    rRNA processing, tRNA processing

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Ribonucleases P/MRP protein subunit pop1 (EC:3.1.26.5)
    Gene namesi
    Name:pop1
    ORF Names:SPAC25B8.16
    OrganismiSchizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
    Taxonomic identifieri284812 [NCBI]
    Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaTaphrinomycotinaSchizosaccharomycetesSchizosaccharomycetalesSchizosaccharomycetaceaeSchizosaccharomyces
    ProteomesiUP000002485: Chromosome I

    Organism-specific databases

    PomBaseiSPAC25B8.16.

    Subcellular locationi

    Nucleusnucleolus 2 Publications

    GO - Cellular componenti

    1. nucleolar ribonuclease P complex Source: PomBase
    2. nucleolus Source: PomBase
    3. nucleus Source: PomBase
    4. ribonuclease MRP complex Source: PomBase

    Keywords - Cellular componenti

    Nucleus

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 698698Ribonucleases P/MRP protein subunit pop1PRO_0000337990Add
    BLAST

    Proteomic databases

    MaxQBiQ9UTA4.

    Interactioni

    Subunit structurei

    Component of nuclear RNase P and RNase MRP complexes.By similarity

    Protein-protein interaction databases

    BioGridi278048. 1 interaction.
    STRINGi4896.SPAC25B8.16-1.

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the POP1 family.Curated

    Phylogenomic databases

    eggNOGiNOG297409.
    KOiK01164.
    OMAiRQDDRIP.
    PhylomeDBiQ9UTA4.

    Family and domain databases

    InterProiIPR012590. POPLD.
    IPR009723. RNase_P/MRP_POP1.
    [Graphical view]
    PfamiPF06978. POP1. 1 hit.
    PF08170. POPLD. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q9UTA4-1 [UniParc]FASTAAdd to Basket

    « Hide

    MKRSTGGTQP KGLNVKRSKL ADARFIEVES PALSNGAVDL KKFIESRSFE    50
    ITALQDAMKR SKESSAQRAF QALPRCLRRR AASHNIKRIP KGLRDRALYE 100
    MQLSSSSTLP IAPSRQRLKR FIKRLRRKLA KSGETKAIDS TGSLVTDNST 150
    DDSRIPSLAA VKLIRGKFAG RQLRKVWLPT HLWVCKRAHM INAWGYAIPE 200
    KPTEKSYRPT HRAAFRKDAI AFDMSYEPLF CISGPYEALK EKFGNSFANG 250
    LPPVFLNSSR SFTSYLVKSD IHELICPCFL QWNNPTEDDK KQIPVKNPTE 300
    CVQLVIRLHP SAFLQAWNYL SGIAVLDDRI AMHDWRLDLA SFDIHGPDSN 350
    IMLHKVFDDV ELDEAGKVWQ SISNYSSACL PMGASISVKA LVNTRCDKNL 400
    SEKGEKSLLD SAENSLPASA NQYSTHFRYW ERQEIPSFAV FENKNRHTHE 450
    KKSSEKEVIP VYITYRKEWN GLTVILPWDY AKFVWRKMMY QKGIRFGGLE 500
    NLHQIAFEKR MPFFPIDYPD TISGQLCEEE RKKRNEDSWK RRPPAKRVNY 550
    QKFGDNFSEI GNPFCCDWVY LNEMVKASRD EDKTLQLVRV QVQLVQRGSL 600
    QDRARIYCLS DDELSKWKTI IYKENLTAEN LLYPKCPNET AIIGFVTTGN 650
    FNLNAGKPSG IANVLAKTIK NEKSGYCIIR NVGCSVPRLA QWKFNQSH 698
    Length:698
    Mass (Da):79,931
    Last modified:May 1, 2000 - v1
    Checksum:i987A6BD0BA2C2427
    GO

    Sequence cautioni

    The sequence BAA87135.1 differs from that shown. Reason: Erroneous initiation.

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CU329670 Genomic DNA. Translation: CAB61782.1.
    AB027831 Genomic DNA. Translation: BAA87135.1. Different initiation.
    PIRiT50203.
    RefSeqiNP_594476.1. NM_001019905.2.

    Genome annotation databases

    EnsemblFungiiSPAC25B8.16.1; SPAC25B8.16.1:pep; SPAC25B8.16.
    GeneIDi2541548.
    KEGGispo:SPAC25B8.16.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CU329670 Genomic DNA. Translation: CAB61782.1 .
    AB027831 Genomic DNA. Translation: BAA87135.1 . Different initiation.
    PIRi T50203.
    RefSeqi NP_594476.1. NM_001019905.2.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    BioGridi 278048. 1 interaction.
    STRINGi 4896.SPAC25B8.16-1.

    Proteomic databases

    MaxQBi Q9UTA4.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblFungii SPAC25B8.16.1 ; SPAC25B8.16.1:pep ; SPAC25B8.16 .
    GeneIDi 2541548.
    KEGGi spo:SPAC25B8.16.

    Organism-specific databases

    PomBasei SPAC25B8.16.

    Phylogenomic databases

    eggNOGi NOG297409.
    KOi K01164.
    OMAi RQDDRIP.
    PhylomeDBi Q9UTA4.

    Miscellaneous databases

    NextBioi 20802645.
    PROi Q9UTA4.

    Family and domain databases

    InterProi IPR012590. POPLD.
    IPR009723. RNase_P/MRP_POP1.
    [Graphical view ]
    Pfami PF06978. POP1. 1 hit.
    PF08170. POPLD. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "The genome sequence of Schizosaccharomyces pombe."
      Wood V., Gwilliam R., Rajandream M.A., Lyne M.H., Lyne R., Stewart A., Sgouros J.G., Peat N., Hayles J., Baker S.G., Basham D., Bowman S., Brooks K., Brown D., Brown S., Chillingworth T., Churcher C.M., Collins M.
      , Connor R., Cronin A., Davis P., Feltwell T., Fraser A., Gentles S., Goble A., Hamlin N., Harris D.E., Hidalgo J., Hodgson G., Holroyd S., Hornsby T., Howarth S., Huckle E.J., Hunt S., Jagels K., James K.D., Jones L., Jones M., Leather S., McDonald S., McLean J., Mooney P., Moule S., Mungall K.L., Murphy L.D., Niblett D., Odell C., Oliver K., O'Neil S., Pearson D., Quail M.A., Rabbinowitsch E., Rutherford K.M., Rutter S., Saunders D., Seeger K., Sharp S., Skelton J., Simmonds M.N., Squares R., Squares S., Stevens K., Taylor K., Taylor R.G., Tivey A., Walsh S.V., Warren T., Whitehead S., Woodward J.R., Volckaert G., Aert R., Robben J., Grymonprez B., Weltjens I., Vanstreels E., Rieger M., Schaefer M., Mueller-Auer S., Gabel C., Fuchs M., Duesterhoeft A., Fritzc C., Holzer E., Moestl D., Hilbert H., Borzym K., Langer I., Beck A., Lehrach H., Reinhardt R., Pohl T.M., Eger P., Zimmermann W., Wedler H., Wambutt R., Purnelle B., Goffeau A., Cadieu E., Dreano S., Gloux S., Lelaure V., Mottier S., Galibert F., Aves S.J., Xiang Z., Hunt C., Moore K., Hurst S.M., Lucas M., Rochet M., Gaillardin C., Tallada V.A., Garzon A., Thode G., Daga R.R., Cruzado L., Jimenez J., Sanchez M., del Rey F., Benito J., Dominguez A., Revuelta J.L., Moreno S., Armstrong J., Forsburg S.L., Cerutti L., Lowe T., McCombie W.R., Paulsen I., Potashkin J., Shpakovski G.V., Ussery D., Barrell B.G., Nurse P.
      Nature 415:871-880(2002) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: 972 / ATCC 24843.
    2. "Large-scale screening of intracellular protein localization in living fission yeast cells by the use of a GFP-fusion genomic DNA library."
      Ding D.-Q., Tomita Y., Yamamoto A., Chikashige Y., Haraguchi T., Hiraoka Y.
      Genes Cells 5:169-190(2000) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA] OF 1-61, SUBCELLULAR LOCATION.
      Strain: ATCC 38364 / 968.
    3. "ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe."
      Matsuyama A., Arai R., Yashiroda Y., Shirai A., Kamata A., Sekido S., Kobayashi Y., Hashimoto A., Hamamoto M., Hiraoka Y., Horinouchi S., Yoshida M.
      Nat. Biotechnol. 24:841-847(2006) [PubMed] [Europe PMC] [Abstract]
      Cited for: SUBCELLULAR LOCATION [LARGE SCALE ANALYSIS].

    Entry informationi

    Entry nameiPOPI_SCHPO
    AccessioniPrimary (citable) accession number: Q9UTA4
    Secondary accession number(s): Q9UU39
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: June 10, 2008
    Last sequence update: May 1, 2000
    Last modified: October 1, 2014
    This is version 68 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programFungal Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Schizosaccharomyces pombe
      Schizosaccharomyces pombe: entries and gene names
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3