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Q9UTA4

- POPI_SCHPO

UniProt

Q9UTA4 - POPI_SCHPO

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Protein

Ribonucleases P/MRP protein subunit pop1

Gene
pop1, SPAC25B8.16
Organism
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Status
Reviewed - Annotation score: 4 out of 5 - Protein inferred from homologyi

Functioni

Required for processing of 5.8S rRNA (short form) at site A3 and for 5' and 3' processing of pre-tRNA By similarity.

Catalytic activityi

Endonucleolytic cleavage of RNA, removing 5'-extranucleotides from tRNA precursor.

GO - Molecular functioni

  1. ribonuclease P activity Source: UniProtKB-EC

GO - Biological processi

  1. mRNA cleavage Source: PomBase
  2. RNA phosphodiester bond hydrolysis Source: GOC
  3. RNA phosphodiester bond hydrolysis, endonucleolytic Source: GOC
  4. rRNA processing Source: PomBase
  5. tRNA 5'-leader removal Source: InterPro
  6. tRNA processing Source: PomBase
Complete GO annotation...

Keywords - Molecular functioni

Hydrolase

Keywords - Biological processi

rRNA processing, tRNA processing

Names & Taxonomyi

Protein namesi
Recommended name:
Ribonucleases P/MRP protein subunit pop1 (EC:3.1.26.5)
Gene namesi
Name:pop1
ORF Names:SPAC25B8.16
OrganismiSchizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Taxonomic identifieri284812 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaTaphrinomycotinaSchizosaccharomycetesSchizosaccharomycetalesSchizosaccharomycetaceaeSchizosaccharomyces
ProteomesiUP000002485: Chromosome I

Organism-specific databases

PomBaseiSPAC25B8.16.

Subcellular locationi

Nucleusnucleolus 2 Publications

GO - Cellular componenti

  1. nucleolar ribonuclease P complex Source: PomBase
  2. nucleolus Source: PomBase
  3. nucleus Source: PomBase
  4. ribonuclease MRP complex Source: PomBase
Complete GO annotation...

Keywords - Cellular componenti

Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 698698Ribonucleases P/MRP protein subunit pop1PRO_0000337990Add
BLAST

Proteomic databases

MaxQBiQ9UTA4.

Interactioni

Subunit structurei

Component of nuclear RNase P and RNase MRP complexes By similarity.

Protein-protein interaction databases

BioGridi278048. 1 interaction.
STRINGi4896.SPAC25B8.16-1.

Family & Domainsi

Sequence similaritiesi

Belongs to the POP1 family.

Phylogenomic databases

eggNOGiNOG297409.
KOiK01164.
OMAiRQDDRIP.
PhylomeDBiQ9UTA4.

Family and domain databases

InterProiIPR012590. POPLD.
IPR009723. RNase_P/MRP_POP1.
[Graphical view]
PfamiPF06978. POP1. 1 hit.
PF08170. POPLD. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9UTA4-1 [UniParc]FASTAAdd to Basket

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MKRSTGGTQP KGLNVKRSKL ADARFIEVES PALSNGAVDL KKFIESRSFE    50
ITALQDAMKR SKESSAQRAF QALPRCLRRR AASHNIKRIP KGLRDRALYE 100
MQLSSSSTLP IAPSRQRLKR FIKRLRRKLA KSGETKAIDS TGSLVTDNST 150
DDSRIPSLAA VKLIRGKFAG RQLRKVWLPT HLWVCKRAHM INAWGYAIPE 200
KPTEKSYRPT HRAAFRKDAI AFDMSYEPLF CISGPYEALK EKFGNSFANG 250
LPPVFLNSSR SFTSYLVKSD IHELICPCFL QWNNPTEDDK KQIPVKNPTE 300
CVQLVIRLHP SAFLQAWNYL SGIAVLDDRI AMHDWRLDLA SFDIHGPDSN 350
IMLHKVFDDV ELDEAGKVWQ SISNYSSACL PMGASISVKA LVNTRCDKNL 400
SEKGEKSLLD SAENSLPASA NQYSTHFRYW ERQEIPSFAV FENKNRHTHE 450
KKSSEKEVIP VYITYRKEWN GLTVILPWDY AKFVWRKMMY QKGIRFGGLE 500
NLHQIAFEKR MPFFPIDYPD TISGQLCEEE RKKRNEDSWK RRPPAKRVNY 550
QKFGDNFSEI GNPFCCDWVY LNEMVKASRD EDKTLQLVRV QVQLVQRGSL 600
QDRARIYCLS DDELSKWKTI IYKENLTAEN LLYPKCPNET AIIGFVTTGN 650
FNLNAGKPSG IANVLAKTIK NEKSGYCIIR NVGCSVPRLA QWKFNQSH 698
Length:698
Mass (Da):79,931
Last modified:May 1, 2000 - v1
Checksum:i987A6BD0BA2C2427
GO

Sequence cautioni

The sequence BAA87135.1 differs from that shown. Reason: Erroneous initiation.

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CU329670 Genomic DNA. Translation: CAB61782.1.
AB027831 Genomic DNA. Translation: BAA87135.1. Different initiation.
PIRiT50203.
RefSeqiNP_594476.1. NM_001019905.2.

Genome annotation databases

EnsemblFungiiSPAC25B8.16.1; SPAC25B8.16.1:pep; SPAC25B8.16.
GeneIDi2541548.
KEGGispo:SPAC25B8.16.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CU329670 Genomic DNA. Translation: CAB61782.1 .
AB027831 Genomic DNA. Translation: BAA87135.1 . Different initiation.
PIRi T50203.
RefSeqi NP_594476.1. NM_001019905.2.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

BioGridi 278048. 1 interaction.
STRINGi 4896.SPAC25B8.16-1.

Proteomic databases

MaxQBi Q9UTA4.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblFungii SPAC25B8.16.1 ; SPAC25B8.16.1:pep ; SPAC25B8.16 .
GeneIDi 2541548.
KEGGi spo:SPAC25B8.16.

Organism-specific databases

PomBasei SPAC25B8.16.

Phylogenomic databases

eggNOGi NOG297409.
KOi K01164.
OMAi RQDDRIP.
PhylomeDBi Q9UTA4.

Miscellaneous databases

NextBioi 20802645.
PROi Q9UTA4.

Family and domain databases

InterProi IPR012590. POPLD.
IPR009723. RNase_P/MRP_POP1.
[Graphical view ]
Pfami PF06978. POP1. 1 hit.
PF08170. POPLD. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "The genome sequence of Schizosaccharomyces pombe."
    Wood V., Gwilliam R., Rajandream M.A., Lyne M.H., Lyne R., Stewart A., Sgouros J.G., Peat N., Hayles J., Baker S.G., Basham D., Bowman S., Brooks K., Brown D., Brown S., Chillingworth T., Churcher C.M., Collins M.
    , Connor R., Cronin A., Davis P., Feltwell T., Fraser A., Gentles S., Goble A., Hamlin N., Harris D.E., Hidalgo J., Hodgson G., Holroyd S., Hornsby T., Howarth S., Huckle E.J., Hunt S., Jagels K., James K.D., Jones L., Jones M., Leather S., McDonald S., McLean J., Mooney P., Moule S., Mungall K.L., Murphy L.D., Niblett D., Odell C., Oliver K., O'Neil S., Pearson D., Quail M.A., Rabbinowitsch E., Rutherford K.M., Rutter S., Saunders D., Seeger K., Sharp S., Skelton J., Simmonds M.N., Squares R., Squares S., Stevens K., Taylor K., Taylor R.G., Tivey A., Walsh S.V., Warren T., Whitehead S., Woodward J.R., Volckaert G., Aert R., Robben J., Grymonprez B., Weltjens I., Vanstreels E., Rieger M., Schaefer M., Mueller-Auer S., Gabel C., Fuchs M., Duesterhoeft A., Fritzc C., Holzer E., Moestl D., Hilbert H., Borzym K., Langer I., Beck A., Lehrach H., Reinhardt R., Pohl T.M., Eger P., Zimmermann W., Wedler H., Wambutt R., Purnelle B., Goffeau A., Cadieu E., Dreano S., Gloux S., Lelaure V., Mottier S., Galibert F., Aves S.J., Xiang Z., Hunt C., Moore K., Hurst S.M., Lucas M., Rochet M., Gaillardin C., Tallada V.A., Garzon A., Thode G., Daga R.R., Cruzado L., Jimenez J., Sanchez M., del Rey F., Benito J., Dominguez A., Revuelta J.L., Moreno S., Armstrong J., Forsburg S.L., Cerutti L., Lowe T., McCombie W.R., Paulsen I., Potashkin J., Shpakovski G.V., Ussery D., Barrell B.G., Nurse P.
    Nature 415:871-880(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 972 / ATCC 24843.
  2. "Large-scale screening of intracellular protein localization in living fission yeast cells by the use of a GFP-fusion genomic DNA library."
    Ding D.-Q., Tomita Y., Yamamoto A., Chikashige Y., Haraguchi T., Hiraoka Y.
    Genes Cells 5:169-190(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA] OF 1-61, SUBCELLULAR LOCATION.
    Strain: ATCC 38364 / 968.
  3. "ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe."
    Matsuyama A., Arai R., Yashiroda Y., Shirai A., Kamata A., Sekido S., Kobayashi Y., Hashimoto A., Hamamoto M., Hiraoka Y., Horinouchi S., Yoshida M.
    Nat. Biotechnol. 24:841-847(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: SUBCELLULAR LOCATION [LARGE SCALE ANALYSIS].

Entry informationi

Entry nameiPOPI_SCHPO
AccessioniPrimary (citable) accession number: Q9UTA4
Secondary accession number(s): Q9UU39
Entry historyi
Integrated into UniProtKB/Swiss-Prot: June 10, 2008
Last sequence update: May 1, 2000
Last modified: May 14, 2014
This is version 67 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Schizosaccharomyces pombe
    Schizosaccharomyces pombe: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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