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Protein

60S ribosomal protein L33-A

Gene

rpl35b

Organism
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Protein inferred from homologyi

Functioni

Miscellaneous

There are two genes for L33 in S.pombe.

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Enzyme and pathway databases

ReactomeiR-SPO-156827. L13a-mediated translational silencing of Ceruloplasmin expression.
R-SPO-1799339. SRP-dependent cotranslational protein targeting to membrane.
R-SPO-72689. Formation of a pool of free 40S subunits.
R-SPO-72706. GTP hydrolysis and joining of the 60S ribosomal subunit.
R-SPO-975956. Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC).
R-SPO-975957. Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC).

Names & Taxonomyi

Protein namesi
Recommended name:
60S ribosomal protein L33-A
Alternative name(s):
L37A
Gene namesi
Name:rpl35b
Synonyms:rpl33a, rpl3701
ORF Names:SPBC1921.01c, SPBC29C10.01c
OrganismiSchizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Taxonomic identifieri284812 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaTaphrinomycotinaSchizosaccharomycetesSchizosaccharomycetalesSchizosaccharomycetaceaeSchizosaccharomyces
Proteomesi
  • UP000002485 Componenti: Chromosome II

Organism-specific databases

EuPathDBiFungiDB:SPBC1921.01c.
PomBaseiSPBC1921.01c. rpl35b.

Subcellular locationi

GO - Cellular componenti

  • cytosol Source: PomBase
  • cytosolic large ribosomal subunit Source: PomBase
  • nucleolus Source: PomBase

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001928051 – 10860S ribosomal protein L33-AAdd BLAST108

Proteomic databases

MaxQBiQ9USX4.
PRIDEiQ9USX4.

Interactioni

Protein-protein interaction databases

BioGridi280371. 16 interactors.
MINTiMINT-4709027.
STRINGi4896.SPBC1921.01c.1.

Structurei

3D structure databases

ProteinModelPortaliQ9USX4.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

HOGENOMiHOG000195636.
InParanoidiQ9USX4.
KOiK02917.
OMAiVRAIWGK.
OrthoDBiEOG092C5MJS.
PhylomeDBiQ9USX4.

Family and domain databases

HAMAPiMF_00573. Ribosomal_L35Ae. 1 hit.
InterProiView protein in InterPro
IPR001780. Ribosomal_L35A.
IPR018266. Ribosomal_L35Ae_CS.
IPR009000. Transl_B-barrel.
PANTHERiPTHR10902. PTHR10902. 1 hit.
PfamiView protein in Pfam
PF01247. Ribosomal_L35Ae. 1 hit.
ProDomiView protein in ProDom or Entries sharing at least one domain
PD012670. Ribosomal_L35Ae. 1 hit.
SUPFAMiSSF50447. SSF50447. 1 hit.
PROSITEiView protein in PROSITE
PS01105. RIBOSOMAL_L35AE. 1 hit.

Sequencei

Sequence statusi: Complete.

Q9USX4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPAQGHRLYV KAKHLSFQRS KHVIHPGTSL VKIEGCDSKE EAQFYLGKRI
60 70 80 90 100
CFVYKSNKPV RGSKIRVIWG TVSRPHGNSG VVRARFTHNL PPKTFGASLR

VMLYPSNV
Length:108
Mass (Da):12,187
Last modified:August 14, 2001 - v2
Checksum:i8B1185F03AC80AD6
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU329671 Genomic DNA. Translation: CAD99404.1.
PIRiT39785.
RefSeqiNP_001018813.2. NM_001021901.3.

Genome annotation databases

EnsemblFungiiSPBC1921.01c.1; SPBC1921.01c.1:pep; SPBC1921.01c.
GeneIDi3361295.
KEGGispo:SPBC1921.01c.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Entry informationi

Entry nameiRL33A_SCHPO
AccessioniPrimary (citable) accession number: Q9USX4
Secondary accession number(s): Q7Z982, Q9P3W0
Entry historyiIntegrated into UniProtKB/Swiss-Prot: August 14, 2001
Last sequence update: August 14, 2001
Last modified: July 5, 2017
This is version 118 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Schizosaccharomyces pombe
    Schizosaccharomyces pombe: entries and gene names
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families