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Protein

Probable mRNA-splicing protein ubp10

Gene

ubp10

Organism
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Protein inferred from homologyi

Functioni

May play a role in mRNA splicing. It is unsure if the protein really exhibits hydrolase activity. Could be a competitor of ubiquitin C-terminal hydrolases (UCHs) (By similarity).By similarity

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Zinc fingeri75 – 136UBP-typePROSITE-ProRule annotationAdd BLAST62

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein
Biological processmRNA processing, mRNA splicing
LigandMetal-binding, Zinc

Protein family/group databases

MEROPSiC19.972.

Names & Taxonomyi

Protein namesi
Recommended name:
Probable mRNA-splicing protein ubp10
Alternative name(s):
Probable inactive ubiquitin-specific-processing protease 10
Gene namesi
Name:ubp10
ORF Names:SPBC577.07
OrganismiSchizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Taxonomic identifieri284812 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaTaphrinomycotinaSchizosaccharomycetesSchizosaccharomycetalesSchizosaccharomycetaceaeSchizosaccharomyces
Proteomesi
  • UP000002485 Componenti: Chromosome II

Organism-specific databases

EuPathDBiFungiDB:SPBC577.07.
PomBaseiSPBC577.07. ubp10.

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Nucleus, Spliceosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00003514431 – 502Probable mRNA-splicing protein ubp10Add BLAST502

Proteomic databases

MaxQBiQ9USR2.
PRIDEiQ9USR2.

Interactioni

Protein-protein interaction databases

MINTiMINT-4708557.
STRINGi4896.SPBC577.07.1.

Structurei

3D structure databases

ProteinModelPortaliQ9USR2.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini178 – 501USPAdd BLAST324

Sequence similaritiesi

Belongs to the peptidase C19 family.Curated

Zinc finger

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Zinc fingeri75 – 136UBP-typePROSITE-ProRule annotationAdd BLAST62

Keywords - Domaini

Zinc-finger

Phylogenomic databases

HOGENOMiHOG000188754.
InParanoidiQ9USR2.
KOiK12847.
OMAiCNVVLHA.
OrthoDBiEOG092C2SDN.
PhylomeDBiQ9USR2.

Family and domain databases

CDDicd02669. Peptidase_C19M. 1 hit.
Gene3Di3.30.40.10. 1 hit.
InterProiView protein in InterPro
IPR001394. Peptidase_C19_UCH.
IPR033809. USP39.
IPR028889. USP_dom.
IPR013083. Znf_RING/FYVE/PHD.
IPR001607. Znf_UBP.
PANTHERiPTHR43985. PTHR43985. 1 hit.
PfamiView protein in Pfam
PF00443. UCH. 1 hit.
PF02148. zf-UBP. 1 hit.
SMARTiView protein in SMART
SM00290. ZnF_UBP. 1 hit.
PROSITEiView protein in PROSITE
PS50235. USP_3. 1 hit.
PS50271. ZF_UBP. 1 hit.

Sequencei

Sequence statusi: Complete.

Q9USR2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSENKDKNNI LKRHIEEDNN IDNGKRKKLE LGKDMEDVHD IASKEMEEHE
60 70 80 90 100
TTPIISQNLY LDTINRKLLD FDFEKVCSVS LTNLSVYACL VCGRYFQGRG
110 120 130 140 150
PSSHAYFHAL TENHHVFVNC STLKFYVLPE SYQVESSALQ DIAYVMRPTF
160 170 180 190 200
TKLEVQRLDH TPQLSYDLML KPYVPGFVGM NNIKNNDYFN VVIHMLAHVK
210 220 230 240 250
PFRNYFLLKN FDNCPQLVQR LAILIRKLWN HKAFKSHVSP QELIQEVTVL
260 270 280 290 300
SHKKYSINEQ KDPVEFLSWF LNTLHNCLGG KKSTIAKPTS IVHYSFQGFV
310 320 330 340 350
RIESQKIRQH AEKGEQVVFT GDRVIQTNVV PFLYLTLDLP PKPIFQDEFE
360 370 380 390 400
GNIIPQVELK EILNKYNGVH TQELAGMRRR FHLMTAPPYF IFHIKRFMKN
410 420 430 440 450
NYFTERNQTI VTFPLDDFDM SPFIDDSFIQ SNPKISTKYN LVANIIHESV
460 470 480 490 500
THAEEEFHNF RIQIRNPSTN KWYQIQDLYV EEISSDMIRL GESFIQLWER

SS
Length:502
Mass (Da):58,885
Last modified:May 1, 2000 - v1
Checksum:i491CED10CC66E8B7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU329671 Genomic DNA. Translation: CAB54815.1.
PIRiT40551.
RefSeqiNP_595305.1. NM_001021212.2.

Genome annotation databases

EnsemblFungiiSPBC577.07.1; SPBC577.07.1:pep; SPBC577.07.
GeneIDi2540864.
KEGGispo:SPBC577.07.

Similar proteinsi

Entry informationi

Entry nameiUBP10_SCHPO
AccessioniPrimary (citable) accession number: Q9USR2
Entry historyiIntegrated into UniProtKB/Swiss-Prot: October 14, 2008
Last sequence update: May 1, 2000
Last modified: October 25, 2017
This is version 101 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Peptidase families
    Classification of peptidase families and list of entries
  2. Schizosaccharomyces pombe
    Schizosaccharomyces pombe: entries and gene names
  3. SIMILARITY comments
    Index of protein domains and families