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Protein

PWI domain-containing protein C825.05c

Gene

SPCC825.05c

Organism
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRNA-binding
Biological processmRNA processing

Names & Taxonomyi

Protein namesi
Recommended name:
PWI domain-containing protein C825.05c
Gene namesi
ORF Names:SPCC825.05c
OrganismiSchizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Taxonomic identifieri284812 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaTaphrinomycotinaSchizosaccharomycetesSchizosaccharomycetalesSchizosaccharomycetaceaeSchizosaccharomyces
Proteomesi
  • UP000002485 Componenti: Chromosome III

Organism-specific databases

EuPathDBiFungiDB:SPCC825.05c.
PomBaseiSPCC825.05c.

Subcellular locationi

  • Nucleus PROSITE-ProRule annotation

GO - Cellular componenti

Keywords - Cellular componenti

Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00003173181 – 301PWI domain-containing protein C825.05cAdd BLAST301

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei86Phosphoserine1 Publication1
Modified residuei199Phosphoserine1 Publication1
Modified residuei291Phosphoserine1 Publication1

Keywords - PTMi

Phosphoprotein

Proteomic databases

MaxQBiQ9USH5.
PRIDEiQ9USH5.

PTM databases

iPTMnetiQ9USH5.

Interactioni

Protein-protein interaction databases

BioGridi276022. 3 interactors.

Structurei

3D structure databases

ProteinModelPortaliQ9USH5.
SMRiQ9USH5.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini26 – 137PWIPROSITE-ProRule annotationAdd BLAST112

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Compositional biasi165 – 286Arg-richAdd BLAST122

Phylogenomic databases

HOGENOMiHOG000206490.
InParanoidiQ9USH5.
KOiK13171.
OMAiRSHKERY.
OrthoDBiEOG092703O3.
PhylomeDBiQ9USH5.

Family and domain databases

Gene3Di1.20.1390.10. 1 hit.
InterProiView protein in InterPro
IPR002483. PWI_dom.
PfamiView protein in Pfam
PF01480. PWI. 1 hit.
SMARTiView protein in SMART
SM00311. PWI. 1 hit.
SUPFAMiSSF101233. SSF101233. 1 hit.
PROSITEiView protein in PROSITE
PS51025. PWI. 1 hit.

Sequencei

Sequence statusi: Complete.

Q9USH5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSGFYKGVAA EQETLFTTAD KKLMRSTKFP ASYDTKVDMK KVNIEVLKPW
60 70 80 90 100
IATRLNELIG FEDEVVINFV YGMLEEAVEA SKTSDSQNES TLDPRKVQLN
110 120 130 140 150
LTGFLESNAT AFTEELWSLI ISASQNQYGI PEKFILEKKE EISKLKDRTE
160 170 180 190 200
ASKEESKTVT DHSNRRESRR ESTYYDSRER NGKRTSRSTL DRKRFHDASD
210 220 230 240 250
TERNRYGRSP SPHSRFSEKP RGERYDIRSY SRSHKERYED RYRPTRRRER
260 270 280 290 300
HYRTRDDEGF DEFGRSRDGR WRESRTSYRE KHRYDRDALS SESDSGTQKH

D
Length:301
Mass (Da):35,631
Last modified:May 1, 2000 - v1
Checksum:iC17D330EC3C1B84A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU329672 Genomic DNA. Translation: CAB58413.1.
PIRiT41626.
RefSeqiNP_588055.1. NM_001023047.2.

Genome annotation databases

EnsemblFungiiSPCC825.05c.1; SPCC825.05c.1:pep; SPCC825.05c.
GeneIDi2539459.
KEGGispo:SPCC825.05c.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU329672 Genomic DNA. Translation: CAB58413.1.
PIRiT41626.
RefSeqiNP_588055.1. NM_001023047.2.

3D structure databases

ProteinModelPortaliQ9USH5.
SMRiQ9USH5.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi276022. 3 interactors.

PTM databases

iPTMnetiQ9USH5.

Proteomic databases

MaxQBiQ9USH5.
PRIDEiQ9USH5.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblFungiiSPCC825.05c.1; SPCC825.05c.1:pep; SPCC825.05c.
GeneIDi2539459.
KEGGispo:SPCC825.05c.

Organism-specific databases

EuPathDBiFungiDB:SPCC825.05c.
PomBaseiSPCC825.05c.

Phylogenomic databases

HOGENOMiHOG000206490.
InParanoidiQ9USH5.
KOiK13171.
OMAiRSHKERY.
OrthoDBiEOG092703O3.
PhylomeDBiQ9USH5.

Miscellaneous databases

PROiQ9USH5.

Family and domain databases

Gene3Di1.20.1390.10. 1 hit.
InterProiView protein in InterPro
IPR002483. PWI_dom.
PfamiView protein in Pfam
PF01480. PWI. 1 hit.
SMARTiView protein in SMART
SM00311. PWI. 1 hit.
SUPFAMiSSF101233. SSF101233. 1 hit.
PROSITEiView protein in PROSITE
PS51025. PWI. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiYJQ5_SCHPO
AccessioniPrimary (citable) accession number: Q9USH5
Entry historyiIntegrated into UniProtKB/Swiss-Prot: February 5, 2008
Last sequence update: May 1, 2000
Last modified: February 15, 2017
This is version 77 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Schizosaccharomyces pombe
    Schizosaccharomyces pombe: entries and gene names

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.