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Protein

60S ribosomal protein L33-B

Gene

rpl35a

Organism
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

Miscellaneous

There are two genes for L33 in S.pombe.

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Enzyme and pathway databases

ReactomeiR-SPO-156827. L13a-mediated translational silencing of Ceruloplasmin expression.
R-SPO-1799339. SRP-dependent cotranslational protein targeting to membrane.
R-SPO-72689. Formation of a pool of free 40S subunits.
R-SPO-72706. GTP hydrolysis and joining of the 60S ribosomal subunit.
R-SPO-975956. Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC).
R-SPO-975957. Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC).

Names & Taxonomyi

Protein namesi
Recommended name:
60S ribosomal protein L33-B
Alternative name(s):
L37B
Gene namesi
Name:rpl35a
Synonyms:rpl33b, rpl37
ORF Names:SPCP31B10.08c
OrganismiSchizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Taxonomic identifieri284812 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaTaphrinomycotinaSchizosaccharomycetesSchizosaccharomycetalesSchizosaccharomycetaceaeSchizosaccharomyces
Proteomesi
  • UP000002485 Componenti: Chromosome III

Organism-specific databases

EuPathDBiFungiDB:SPCP31B10.08c.
PomBaseiSPCP31B10.08c. rpl35a.

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001928061 – 10860S ribosomal protein L33-BAdd BLAST108

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei98Phosphoserine1 Publication1

Keywords - PTMi

Phosphoprotein

Proteomic databases

MaxQBiQ9USG6.
PRIDEiQ9USG6.

PTM databases

iPTMnetiQ9USG6.

Interactioni

Protein-protein interaction databases

BioGridi276080. 1 interactor.
STRINGi4896.SPCP31B10.08c.1.

Structurei

3D structure databases

ProteinModelPortaliQ9USG6.
SMRiQ9USG6.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

HOGENOMiHOG000195636.
InParanoidiQ9USG6.
KOiK02917.
OMAiNTRTEVD.
OrthoDBiEOG092C5MJS.
PhylomeDBiQ9USG6.

Family and domain databases

HAMAPiMF_00573. Ribosomal_L35Ae. 1 hit.
InterProiView protein in InterPro
IPR001780. Ribosomal_L35A.
IPR018266. Ribosomal_L35Ae_CS.
IPR009000. Transl_B-barrel.
PANTHERiPTHR10902. PTHR10902. 1 hit.
PfamiView protein in Pfam
PF01247. Ribosomal_L35Ae. 1 hit.
ProDomiView protein in ProDom or Entries sharing at least one domain
PD012670. Ribosomal_L35Ae. 1 hit.
SUPFAMiSSF50447. SSF50447. 1 hit.
PROSITEiView protein in PROSITE
PS01105. RIBOSOMAL_L35AE. 1 hit.

Sequencei

Sequence statusi: Complete.

Q9USG6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPAQGHRLYV KAKHLSFQRS KHVIHPGTSI VKIEGCDSKE EAQFYLGKRV
60 70 80 90 100
CYVYKSSKAV RGSKIRVIWG TIARPHGNSG AVRARFVHNL PAKTFGSSLR

VMLYPSNI
Length:108
Mass (Da):12,108
Last modified:May 1, 2000 - v1
Checksum:iEC59F196E73E85C3
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti21K → N in BAA33367 (Ref. 2) Curated1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU329672 Genomic DNA. Translation: CAB58374.1.
AB017603 mRNA. Translation: BAA33367.1.
PIRiT41698.
RefSeqiNP_587864.1. NM_001022857.2.

Genome annotation databases

EnsemblFungiiSPCP31B10.08c.1; SPCP31B10.08c.1:pep; SPCP31B10.08c.
GeneIDi2539518.
KEGGispo:SPCP31B10.08c.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Entry informationi

Entry nameiRL33B_SCHPO
AccessioniPrimary (citable) accession number: Q9USG6
Secondary accession number(s): O74647
Entry historyiIntegrated into UniProtKB/Swiss-Prot: August 14, 2001
Last sequence update: May 1, 2000
Last modified: July 5, 2017
This is version 114 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Schizosaccharomyces pombe
    Schizosaccharomyces pombe: entries and gene names
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families