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Protein

TBC domain-containing protein C1952.17c

Gene

SPAC1952.17c

Organism
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Protein predictedi

Functioni

May act as a GTPase-activating protein for Rab family protein(s).

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionGTPase activation

Names & Taxonomyi

Protein namesi
Recommended name:
TBC domain-containing protein C1952.17c
Gene namesi
ORF Names:SPAC1952.17c
OrganismiSchizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Taxonomic identifieri284812 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaTaphrinomycotinaSchizosaccharomycetesSchizosaccharomycetalesSchizosaccharomycetaceaeSchizosaccharomyces
Proteomesi
  • UP000002485 Componenti: Chromosome I

Organism-specific databases

EuPathDBiFungiDB:SPAC1952.17c.
PomBaseiSPAC1952.17c.

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00003528341 – 619TBC domain-containing protein C1952.17cAdd BLAST619

Proteomic databases

MaxQBiQ9URY3.
PaxDbiQ9URY3.
PRIDEiQ9URY3.

PTM databases

iPTMnetiQ9URY3.

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

BioGridi279008. 3 interactors.
STRINGi4896.SPAC1952.17c.1.

Structurei

3D structure databases

ProteinModelPortaliQ9URY3.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini34 – 387Rab-GAP TBCPROSITE-ProRule annotationAdd BLAST354

Phylogenomic databases

InParanoidiQ9URY3.
OMAiMEYKLEF.
OrthoDBiEOG092C0W2S.
PhylomeDBiQ9URY3.

Family and domain databases

InterProiView protein in InterPro
IPR000195. Rab-GTPase-TBC_dom.
IPR035969. Rab-GTPase_TBC_sf.
PfamiView protein in Pfam
PF00566. RabGAP-TBC. 1 hit.
SMARTiView protein in SMART
SM00164. TBC. 1 hit.
SUPFAMiSSF47923. SSF47923. 4 hits.
PROSITEiView protein in PROSITE
PS50086. TBC_RABGAP. 1 hit.

Sequencei

Sequence statusi: Complete.

Q9URY3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDYKQRIEKF KDILNSEEPI SLPGLCSLCI QGIPDEYSLR AKAWMLMLEF
60 70 80 90 100
LPTDRSNWQS VLEKHRKTYT SFVQELLIDP WRKLTLHEES GENSDHPLNT
110 120 130 140 150
SDDSKWKEYF DDNQILEQID KDIRRTLPDL SFFQGKSEIN KKPSVNNVSE
160 170 180 190 200
NISVNTEDDK VEEVGQKLNY TKITSIDQSQ ETPVHLSTID FSKFQEECHL
210 220 230 240 250
VLQGRIYRLE NESTSSSTTA LSTPRQSMDS KRTINAEAIA GENKLGLHRE
260 270 280 290 300
AAERILFIYA KLNPGIGYVQ GMNEILAPLY YVLATDPTYE NYYLCECDAF
310 320 330 340 350
FLFTQMMVQV RDLYEKTLDH DSDHGIHFLM SKFTERLKKY DYELWENLEE
360 370 380 390 400
KQIHPTYYSF RWFTCLLSQE FPLPDVIRLW DSIIADQMKA RLFGKNDDGF
410 420 430 440 450
NGAYDFLMDF CCSILIELRE SILERNFADS IKLLQAHFNV DMPKLLNLTF
460 470 480 490 500
ELQHLRKTSK NDEDMSYVRK NSYNTNALAN SLKNRVLSTY NTVKANVPQS
510 520 530 540 550
SSSYTDNNKQ KEPLEEKRSF FPSFRSSLDG VSPTQGRKSG EENIRTIFAK
560 570 580 590 600
PTAHIGENGW SNLKVKGSSI FQRFGNFVGD TMRYITEEEE SSEEEDLTTS
610
RRKIGITSKR KVSVKRNVI
Length:619
Mass (Da):71,879
Last modified:August 21, 2007 - v4
Checksum:i06ECEBF7D984AB98
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU329670 Genomic DNA. Translation: CAB52581.2.
RefSeqiNP_594819.2. NM_001020248.2.

Genome annotation databases

EnsemblFungiiSPAC1952.17c.1; SPAC1952.17c.1:pep; SPAC1952.17c.
GeneIDi2542551.
KEGGispo:SPAC1952.17c.

Similar proteinsi

Entry informationi

Entry nameiYLOH_SCHPO
AccessioniPrimary (citable) accession number: Q9URY3
Secondary accession number(s): Q9UUJ2
Entry historyiIntegrated into UniProtKB/Swiss-Prot: November 4, 2008
Last sequence update: August 21, 2007
Last modified: January 31, 2018
This is version 88 of the entry and version 4 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Schizosaccharomyces pombe
    Schizosaccharomyces pombe: entries and gene names