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Protein

60S ribosomal protein L34-B

Gene

rpl3402

Organism
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at protein leveli

Functioni

Miscellaneous

There are two genes for L34 in S.pombe.

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Enzyme and pathway databases

ReactomeiR-SPO-156827. L13a-mediated translational silencing of Ceruloplasmin expression.
R-SPO-1799339. SRP-dependent cotranslational protein targeting to membrane.
R-SPO-72689. Formation of a pool of free 40S subunits.
R-SPO-72706. GTP hydrolysis and joining of the 60S ribosomal subunit.
R-SPO-975956. Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC).
R-SPO-975957. Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC).

Names & Taxonomyi

Protein namesi
Recommended name:
60S ribosomal protein L34-B
Alternative name(s):
60S ribosomal protein L34-2
Gene namesi
Name:rpl3402
Synonyms:rpl34b
ORF Names:SPCC1322.15
OrganismiSchizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Taxonomic identifieri284812 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaTaphrinomycotinaSchizosaccharomycetesSchizosaccharomycetalesSchizosaccharomycetaceaeSchizosaccharomyces
Proteomesi
  • UP000002485 Componenti: Chromosome III

Organism-specific databases

EuPathDBiFungiDB:SPCC1322.15.
PomBaseiSPCC1322.15. rpl3402.

Subcellular locationi

GO - Cellular componenti

  • cytosol Source: PomBase
  • cytosolic large ribosomal subunit Source: PomBase
  • nucleolus Source: PomBase

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001318441 – 11160S ribosomal protein L34-BAdd BLAST111

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei76Phosphotyrosine1 Publication1

Keywords - PTMi

Phosphoprotein

Proteomic databases

MaxQBiQ9URT8.
PRIDEiQ9URT8.

PTM databases

iPTMnetiQ9URT8.

Interactioni

Protein-protein interaction databases

BioGridi275396. 5 interactors.
MINTiMINT-4706977.
STRINGi4896.SPCC1322.15.1.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

HOGENOMiHOG000216922.
InParanoidiQ9URT8.
KOiK02915.
OMAiKTHAFAK.
OrthoDBiEOG092C5L2Y.
PhylomeDBiQ9URT8.

Family and domain databases

InterProiView protein in InterPro
IPR008195. Ribosomal_L34Ae.
IPR018065. Ribosomal_L34e_CS.
PANTHERiPTHR10759. PTHR10759. 1 hit.
PfamiView protein in Pfam
PF01199. Ribosomal_L34e. 1 hit.
PRINTSiPR01250. RIBOSOMALL34.
PROSITEiView protein in PROSITE
PS01145. RIBOSOMAL_L34E. 1 hit.

Sequencei

Sequence statusi: Complete.

Q9URT8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAQRVTYRRR LAYNTRSNKT RIIKTPGNNI RYLHIKKLGT IPRCGDTGVP
60 70 80 90 100
LQGIPALRPR EFARLSHNQK KVQRAYGGCL SANAVKDRIV RAFLIEEQKI
110
VKQKLKQMSQ K
Length:111
Mass (Da):12,800
Last modified:May 1, 2000 - v1
Checksum:iB0148F3079677F26
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU329672 Genomic DNA. Translation: CAA22868.1.
PIRiT40946.
RefSeqiNP_588143.1. NM_001023133.2.

Genome annotation databases

EnsemblFungiiSPCC1322.15.1; SPCC1322.15.1:pep; SPCC1322.15.
GeneIDi2538815.
KEGGispo:SPCC1322.15.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Entry informationi

Entry nameiRL34B_SCHPO
AccessioniPrimary (citable) accession number: Q9URT8
Entry historyiIntegrated into UniProtKB/Swiss-Prot: April 26, 2005
Last sequence update: May 1, 2000
Last modified: July 5, 2017
This is version 104 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Schizosaccharomyces pombe
    Schizosaccharomyces pombe: entries and gene names
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families