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Q9UQR1

- ZN148_HUMAN

UniProt

Q9UQR1 - ZN148_HUMAN

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Protein
Zinc finger protein 148
Gene
ZNF148, ZBP89
Organism
Homo sapiens (Human)
Status
Reviewed - Annotation score: 5 out of 5 - Experimental evidence at protein leveli

Functioni

Involved in transcriptional regulation. Represses the transcription of a number of genes including gastrin, stromelysin and enolase. Binds to the G-rich box in the enhancer region of these genes.

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Zinc fingeri171 – 19323C2H2-type 1
Add
BLAST
Zinc fingeri199 – 22123C2H2-type 2
Add
BLAST
Zinc fingeri227 – 24923C2H2-type 3
Add
BLAST
Zinc fingeri255 – 27824C2H2-type 4
Add
BLAST

GO - Molecular functioni

  1. double-stranded DNA binding Source: Ensembl
  2. metal ion binding Source: UniProtKB-KW
  3. protein binding Source: UniProtKB
  4. sequence-specific DNA binding Source: UniProtKB
  5. sequence-specific DNA binding transcription factor activity Source: Ensembl
  6. transcription regulatory region sequence-specific DNA binding Source: Ensembl

GO - Biological processi

  1. cellular defense response Source: ProtInc
  2. gamete generation Source: Ensembl
  3. negative regulation of gene expression Source: UniProtKB
  4. negative regulation of transcription from RNA polymerase II promoter Source: ProtInc
  5. negative regulation of transcription, DNA-templated Source: UniProtKB
  6. positive regulation of transcription from RNA polymerase II promoter Source: Ensembl
  7. protein complex assembly Source: Ensembl
  8. substantia nigra development Source: UniProt
  9. transcription from RNA polymerase II promoter Source: ProtInc
Complete GO annotation...

Keywords - Molecular functioni

Repressor

Keywords - Biological processi

Transcription, Transcription regulation

Keywords - Ligandi

DNA-binding, Metal-binding, Zinc

Enzyme and pathway databases

SignaLinkiQ9UQR1.

Names & Taxonomyi

Protein namesi
Recommended name:
Zinc finger protein 148
Alternative name(s):
Transcription factor ZBP-89
Zinc finger DNA-binding protein 89
Gene namesi
Name:ZNF148
Synonyms:ZBP89
OrganismiHomo sapiens (Human)
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
ProteomesiUP000005640: Chromosome 3

Organism-specific databases

HGNCiHGNC:12933. ZNF148.

Subcellular locationi

GO - Cellular componenti

  1. nucleus Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

Nucleus

Pathology & Biotechi

Organism-specific databases

PharmGKBiPA37520.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 794794Zinc finger protein 148
PRO_0000047427Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei194 – 1941Phosphothreonine1 Publication
Modified residuei250 – 2501Phosphoserine1 Publication
Modified residuei306 – 3061Phosphoserine4 Publications
Modified residuei412 – 4121Phosphoserine1 Publication
Modified residuei607 – 6071N6-acetyllysine1 Publication
Modified residuei665 – 6651Phosphoserine1 Publication
Modified residuei784 – 7841Phosphoserine3 Publications

Post-translational modificationi

Sumoylated with SUMO2. Desumoylated by SENP3, resulting in the stimulation of transcription of its target genes By similarity.

Keywords - PTMi

Acetylation, Phosphoprotein, Ubl conjugation

Proteomic databases

MaxQBiQ9UQR1.
PaxDbiQ9UQR1.
PRIDEiQ9UQR1.

PTM databases

PhosphoSiteiQ9UQR1.

Expressioni

Gene expression databases

ArrayExpressiQ9UQR1.
BgeeiQ9UQR1.
CleanExiHS_ZNF148.
GenevestigatoriQ9UQR1.

Organism-specific databases

HPAiCAB017486.
HPA001656.

Interactioni

Subunit structurei

Interacts with HNRNPDL. Interacts with the 5FMC complex; the interaction requires association with CHTOP.1 Publication

Protein-protein interaction databases

BioGridi113501. 13 interactions.
IntActiQ9UQR1. 4 interactions.
STRINGi9606.ENSP00000353863.

Structurei

3D structure databases

ProteinModelPortaliQ9UQR1.
SMRiQ9UQR1. Positions 138-324, 350-385.

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Repeat, Zinc-finger

Phylogenomic databases

eggNOGiCOG5048.
HOGENOMiHOG000293204.
HOVERGENiHBG054247.
InParanoidiQ9UQR1.
OMAiNDAYLNN.
OrthoDBiEOG76QFGM.
PhylomeDBiQ9UQR1.
TreeFamiTF331779.

Family and domain databases

Gene3Di3.30.160.60. 4 hits.
InterProiIPR007087. Znf_C2H2.
IPR015880. Znf_C2H2-like.
IPR013087. Znf_C2H2/integrase_DNA-bd.
[Graphical view]
SMARTiSM00355. ZnF_C2H2. 4 hits.
[Graphical view]
PROSITEiPS00028. ZINC_FINGER_C2H2_1. 4 hits.
PS50157. ZINC_FINGER_C2H2_2. 4 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9UQR1-1 [UniParc]FASTAAdd to Basket

« Hide

MNIDDKLEGL FLKCGGIDEM QSSRTMVVMG GVSGQSTVSG ELQDSVLQDR    50
SMPHQEILAA DEVLQESEMR QQDMISHDEL MVHEETVKND EEQMETHERL 100
PQGLQYALNV PISVKQEITF TDVSEQLMRD KKQIREPVDL QKKKKRKQRS 150
PAKILTINED GSLGLKTPKS HVCEHCNAAF RTNYHLQRHV FIHTGEKPFQ 200
CSQCDMRFIQ KYLLQRHEKI HTGEKPFRCD ECGMRFIQKY HMERHKRTHS 250
GEKPYQCEYC LQYFSRTDRV LKHKRMCHEN HDKKLNRCAI KGGLLTSEED 300
SGFSTSPKDN SLPKKKRQKT EKKSSGMDKE SALDKSDLKK DKNDYLPLYS 350
SSTKVKDEYM VAEYAVEMPH SSVGGSHLED ASGEIHPPKL VLKKINSKRS 400
LKQPLEQNQT ISPLSTYEES KVSKYAFELV DKQALLDSEG NADIDQVDNL 450
QEGPSKPVHS STNYDDAMQF LKKKRYLQAA SNNSREYALN VGTIASQPSV 500
TQAAVASVID ESTTASILES QALNVEIKSN HDKNVIPDEV LQTLLDHYSH 550
KANGQHEISF SVADTEVTSS ISINSSEVPE VTPSENVGSS SQASSSDKAN 600
MLQEYSKFLQ QALDRTSQND AYLNSPSLNF VTDNQTLPNQ PAFSSIDKQV 650
YATMPINSFR SGMNSPLRTT PDKSHFGLIV GDSQHSFPFS GDETNHASAT 700
STQDFLDQVT SQKKAEAQPV HQAYQMSSFE QPFRAPYHGS RAGIATQFST 750
ANGQVNLRGP GTSAEFSEFP LVNVNDNRAG MTSSPDATTG QTFG 794
Length:794
Mass (Da):88,976
Last modified:January 24, 2001 - v2
Checksum:i50413723459EBD1F
GO

Sequence conflict

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti287 – 2871R → T in CAA15422. 1 Publication
Sequence conflicti348 – 3481L → V in CAA15422. 1 Publication
Sequence conflicti379 – 3791E → K in AAB57692. 1 Publication
Sequence conflicti495 – 4951A → R in CAA15422. 1 Publication
Sequence conflicti616 – 6161T → N in AAB57692. 1 Publication

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AF039019 mRNA. Translation: AAC39926.1.
AJ236885 mRNA. Translation: CAA15422.1.
CH471052 Genomic DNA. Translation: EAW79394.1.
CH471052 Genomic DNA. Translation: EAW79395.1.
CH471052 Genomic DNA. Translation: EAW79396.1.
CH471052 Genomic DNA. Translation: EAW79398.1.
BC050260 mRNA. Translation: AAH50260.1.
U96633 Genomic DNA. Translation: AAB57692.1.
CCDSiCCDS3031.1.
RefSeqiNP_068799.2. NM_021964.2.
UniGeneiHs.592591.

Genome annotation databases

EnsembliENST00000360647; ENSP00000353863; ENSG00000163848.
ENST00000484491; ENSP00000420335; ENSG00000163848.
ENST00000485866; ENSP00000420448; ENSG00000163848.
ENST00000492394; ENSP00000419322; ENSG00000163848.
GeneIDi7707.
KEGGihsa:7707.
UCSCiuc003ehx.4. human.

Polymorphism databases

DMDMi12643385.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AF039019 mRNA. Translation: AAC39926.1 .
AJ236885 mRNA. Translation: CAA15422.1 .
CH471052 Genomic DNA. Translation: EAW79394.1 .
CH471052 Genomic DNA. Translation: EAW79395.1 .
CH471052 Genomic DNA. Translation: EAW79396.1 .
CH471052 Genomic DNA. Translation: EAW79398.1 .
BC050260 mRNA. Translation: AAH50260.1 .
U96633 Genomic DNA. Translation: AAB57692.1 .
CCDSi CCDS3031.1.
RefSeqi NP_068799.2. NM_021964.2.
UniGenei Hs.592591.

3D structure databases

ProteinModelPortali Q9UQR1.
SMRi Q9UQR1. Positions 138-324, 350-385.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

BioGridi 113501. 13 interactions.
IntActi Q9UQR1. 4 interactions.
STRINGi 9606.ENSP00000353863.

PTM databases

PhosphoSitei Q9UQR1.

Polymorphism databases

DMDMi 12643385.

Proteomic databases

MaxQBi Q9UQR1.
PaxDbi Q9UQR1.
PRIDEi Q9UQR1.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENST00000360647 ; ENSP00000353863 ; ENSG00000163848 .
ENST00000484491 ; ENSP00000420335 ; ENSG00000163848 .
ENST00000485866 ; ENSP00000420448 ; ENSG00000163848 .
ENST00000492394 ; ENSP00000419322 ; ENSG00000163848 .
GeneIDi 7707.
KEGGi hsa:7707.
UCSCi uc003ehx.4. human.

Organism-specific databases

CTDi 7707.
GeneCardsi GC03M124944.
HGNCi HGNC:12933. ZNF148.
HPAi CAB017486.
HPA001656.
MIMi 601897. gene.
neXtProti NX_Q9UQR1.
PharmGKBi PA37520.
GenAtlasi Search...

Phylogenomic databases

eggNOGi COG5048.
HOGENOMi HOG000293204.
HOVERGENi HBG054247.
InParanoidi Q9UQR1.
OMAi NDAYLNN.
OrthoDBi EOG76QFGM.
PhylomeDBi Q9UQR1.
TreeFami TF331779.

Enzyme and pathway databases

SignaLinki Q9UQR1.

Miscellaneous databases

GeneWikii ZNF148.
GenomeRNAii 7707.
NextBioi 29880.
PROi Q9UQR1.
SOURCEi Search...

Gene expression databases

ArrayExpressi Q9UQR1.
Bgeei Q9UQR1.
CleanExi HS_ZNF148.
Genevestigatori Q9UQR1.

Family and domain databases

Gene3Di 3.30.160.60. 4 hits.
InterProi IPR007087. Znf_C2H2.
IPR015880. Znf_C2H2-like.
IPR013087. Znf_C2H2/integrase_DNA-bd.
[Graphical view ]
SMARTi SM00355. ZnF_C2H2. 4 hits.
[Graphical view ]
PROSITEi PS00028. ZINC_FINGER_C2H2_1. 4 hits.
PS50157. ZINC_FINGER_C2H2_2. 4 hits.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "The human ZBP-89 homolog, located at chromosome 3q21, represses gastrin gene expression."
    Law D.J., Tarle S.A., Merchant J.L.
    Mamm. Genome 9:165-167(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [MRNA].
  2. "Human stromelysin gene promoter activity is modulated by transcription factor ZBP-89."
    Ye S., Whatling C., Watkins H., Henney A.
    FEBS Lett. 450:268-272(1999) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [MRNA].
  3. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  4. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: Kidney.
  5. "The growth-regulating transcription factor ZBP-89 is located at human chromosome 3q21 and mouse chromosome 8B1."
    Law D.J., Chen X.N., Korenberg J.R., Mortensen E.R., Merchant J.L.
    Submitted (APR-1997) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 262-665.
  6. "Regulation of murine cytochrome c oxidase Vb gene expression during myogenesis: YY-1 and heterogeneous nuclear ribonucleoprotein D-like protein (JKTBP1) reciprocally regulate transcription activity by physical interaction with the BERF-1/ZBP-89 factor."
    Boopathi E., Lenka N., Prabu S.K., Fang J.-K., Wilkinson F., Atchison M., Giallongo A., Avadhani N.G.
    J. Biol. Chem. 279:35242-35254(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: INTERACTION WITH HNRNPDL.
  7. "A probability-based approach for high-throughput protein phosphorylation analysis and site localization."
    Beausoleil S.A., Villen J., Gerber S.A., Rush J., Gygi S.P.
    Nat. Biotechnol. 24:1285-1292(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-306, IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
    Tissue: Cervix carcinoma.
  8. Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT THR-194; SER-250; SER-306; SER-412 AND SER-784, IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
    Tissue: Cervix carcinoma.
  9. "Lys-N and trypsin cover complementary parts of the phosphoproteome in a refined SCX-based approach."
    Gauci S., Helbig A.O., Slijper M., Krijgsveld J., Heck A.J., Mohammed S.
    Anal. Chem. 81:4493-4501(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
  10. "Quantitative phosphoproteomic analysis of T cell receptor signaling reveals system-wide modulation of protein-protein interactions."
    Mayya V., Lundgren D.H., Hwang S.-I., Rezaul K., Wu L., Eng J.K., Rodionov V., Han D.K.
    Sci. Signal. 2:RA46-RA46(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-306 AND SER-784, IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
    Tissue: Leukemic T-cell.
  11. "Lysine acetylation targets protein complexes and co-regulates major cellular functions."
    Choudhary C., Kumar C., Gnad F., Nielsen M.L., Rehman M., Walther T.C., Olsen J.V., Mann M.
    Science 325:834-840(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: ACETYLATION [LARGE SCALE ANALYSIS] AT LYS-607, IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
  12. "Quantitative phosphoproteomics reveals widespread full phosphorylation site occupancy during mitosis."
    Olsen J.V., Vermeulen M., Santamaria A., Kumar C., Miller M.L., Jensen L.J., Gnad F., Cox J., Jensen T.S., Nigg E.A., Brunak S., Mann M.
    Sci. Signal. 3:RA3-RA3(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-306; SER-665 AND SER-784, IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
    Tissue: Cervix carcinoma.
  13. "System-wide temporal characterization of the proteome and phosphoproteome of human embryonic stem cell differentiation."
    Rigbolt K.T., Prokhorova T.A., Akimov V., Henningsen J., Johansen P.T., Kratchmarova I., Kassem M., Mann M., Olsen J.V., Blagoev B.
    Sci. Signal. 4:RS3-RS3(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].

Entry informationi

Entry nameiZN148_HUMAN
AccessioniPrimary (citable) accession number: Q9UQR1
Secondary accession number(s): D3DN27
, O00389, O43591, Q58EY5
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 24, 2001
Last sequence update: January 24, 2001
Last modified: September 3, 2014
This is version 128 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Human chromosome 3
    Human chromosome 3: entries, gene names and cross-references to MIM
  2. MIM cross-references
    Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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