Q9UQ16 (DYN3_HUMAN) Reviewed, UniProtKB/Swiss-Prot
Last modified
May 1, 2013.
Version 117.
History...
Names·Attributes·General annotation·Ontologies·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Dynamin-3 EC=3.6.5.5 Alternative name(s): Dynamin, testicular T-dynamin | ||||
| Gene names |
| ||||
| Organism | Homo sapiens (Human) [Reference proteome] | ||||
| Taxonomic identifier | 9606 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo![]() |
Protein attributes
| Sequence length | 869 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at protein level |
General annotation (Comments)
| Function | Microtubule-associated force-producing protein involved in producing microtubule bundles and able to bind and hydrolyze GTP. Most probably involved in vesicular trafficking processes, in particular endocytosis By similarity. |
| Catalytic activity | GTP + H2O = GDP + phosphate. |
| Subcellular location | Cytoplasm Potential. Cytoplasm › cytoskeleton Potential. Note: Microtubule-associated Potential. |
| Sequence similarities | Belongs to the dynamin family. Contains 1 GED domain. Contains 1 PH domain. |
| Sequence caution | The sequence BAA74843.2 differs from that shown. Reason: Erroneous initiation. |
Ontologies
Alternative products
| This entry describes 4 isoforms produced by alternative splicing. [Align] [Select] | ||||||
| Isoform 1 (identifier: Q9UQ16-1) This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry. | ||||||
| Isoform 2 (identifier: Q9UQ16-2) The sequence of this isoform differs from the canonical sequence as follows: 516-525: Missing. | ||||||
| Isoform 3 (identifier: Q9UQ16-3) The sequence of this isoform differs from the canonical sequence as follows: 516-525: Missing. 637-637: V → VGNNK | ||||||
| Isoform 4 (identifier: Q9UQ16-4) The sequence of this isoform differs from the canonical sequence as follows: 637-637: V → VGNNK |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | |||||||||||||||||||||||||||||||||||||||||||
Molecule processing | ||||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 869 | 869 | Dynamin-3 | PRO_0000206573 | ||||||||||||||||||||||||||||||||||||||||||||
Regions | ||||||||||||||||||||||||||||||||||||||||||||||||
| Domain | 515 – 621 | 107 | PH | |||||||||||||||||||||||||||||||||||||||||||||
| Domain | 659 – 750 | 92 | GED | |||||||||||||||||||||||||||||||||||||||||||||
| Nucleotide binding | 38 – 45 | 8 | GTP By similarity | |||||||||||||||||||||||||||||||||||||||||||||
| Nucleotide binding | 136 – 140 | 5 | GTP By similarity | |||||||||||||||||||||||||||||||||||||||||||||
| Nucleotide binding | 205 – 208 | 4 | GTP By similarity | |||||||||||||||||||||||||||||||||||||||||||||
Amino acid modifications | ||||||||||||||||||||||||||||||||||||||||||||||||
| Modified residue | 769 | 1 | Phosphoserine By similarity | |||||||||||||||||||||||||||||||||||||||||||||
| Modified residue | 773 | 1 | Phosphoserine By similarity | |||||||||||||||||||||||||||||||||||||||||||||
| Modified residue | 853 | 1 | Phosphoserine By similarity | |||||||||||||||||||||||||||||||||||||||||||||
Natural variations | ||||||||||||||||||||||||||||||||||||||||||||||||
| Alternative sequence | 516 – 525 | 10 | Missing in isoform 2 and isoform 3. | VSP_034053 | ||||||||||||||||||||||||||||||||||||||||||||
| Alternative sequence | 637 | 1 | V → VGNNK in isoform 3 and isoform 4. | VSP_034054 | ||||||||||||||||||||||||||||||||||||||||||||
Experimental info | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence conflict | 323 | 1 | T → S in CAB66647. Ref.3 | |||||||||||||||||||||||||||||||||||||||||||||
| Sequence conflict | 412 | 1 | I → T in CAB66647. Ref.3 | |||||||||||||||||||||||||||||||||||||||||||||
| Sequence conflict | 844 | 1 | S → R in CAB66647. Ref.3 | |||||||||||||||||||||||||||||||||||||||||||||
Secondary structure | ||||||||||||||||||||||||||||||||||||||||||||||||
Helix Strand Turn | ||||||||||||||||||||||||||||||||||||||||||||||||
| Beta strand | 34 – 37 | 4 | ||||||||||||||||||||||||||||||||||||||||||||||
| Helix | 44 – 52 | 9 | ||||||||||||||||||||||||||||||||||||||||||||||
| Beta strand | 69 – 75 | 7 | ||||||||||||||||||||||||||||||||||||||||||||||
| Beta strand | 80 – 86 | 7 | ||||||||||||||||||||||||||||||||||||||||||||||
| Helix | 94 – 105 | 12 | ||||||||||||||||||||||||||||||||||||||||||||||
| Beta strand | 120 – 126 | 7 | ||||||||||||||||||||||||||||||||||||||||||||||
| Beta strand | 131 – 136 | 6 | ||||||||||||||||||||||||||||||||||||||||||||||
| Helix | 152 – 164 | 13 | ||||||||||||||||||||||||||||||||||||||||||||||
| Beta strand | 170 – 176 | 7 | ||||||||||||||||||||||||||||||||||||||||||||||
| Helix | 181 – 183 | 3 | ||||||||||||||||||||||||||||||||||||||||||||||
| Helix | 185 – 193 | 9 | ||||||||||||||||||||||||||||||||||||||||||||||
| Beta strand | 200 – 205 | 6 | ||||||||||||||||||||||||||||||||||||||||||||||
| Helix | 207 – 209 | 3 | ||||||||||||||||||||||||||||||||||||||||||||||
| Helix | 217 – 220 | 4 | ||||||||||||||||||||||||||||||||||||||||||||||
| Beta strand | 231 – 233 | 3 | ||||||||||||||||||||||||||||||||||||||||||||||
| Helix | 239 – 243 | 5 | ||||||||||||||||||||||||||||||||||||||||||||||
| Helix | 248 – 261 | 14 | ||||||||||||||||||||||||||||||||||||||||||||||
| Turn | 263 – 265 | 3 | ||||||||||||||||||||||||||||||||||||||||||||||
| Helix | 266 – 271 | 6 | ||||||||||||||||||||||||||||||||||||||||||||||
| Helix | 274 – 285 | 12 | ||||||||||||||||||||||||||||||||||||||||||||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "Prediction of the coding sequences of unidentified human genes. XII. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro." Nagase T., Ishikawa K., Suyama M., Kikuno R., Hirosawa M., Miyajima N., Tanaka A., Kotani H., Nomura N., Ohara O. DNA Res. 5:355-364(1998) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 2). Tissue: Brain. |
| [2] | "Construction of expression-ready cDNA clones for KIAA genes: manual curation of 330 KIAA cDNA clones." Nakajima D., Okazaki N., Yamakawa H., Kikuno R., Ohara O., Nagase T. DNA Res. 9:99-106(2002) [PubMed] [Europe PMC] [Abstract] Cited for: SEQUENCE REVISION. |
| [3] | "Towards a catalog of human genes and proteins: sequencing and analysis of 500 novel complete protein coding human cDNAs." Wiemann S., Weil B., Wellenreuther R., Gassenhuber J., Glassl S., Ansorge W., Boecher M., Bloecker H., Bauersachs S., Blum H., Lauber J., Duesterhoeft A., Beyer A., Koehrer K., Strack N., Mewes H.-W., Ottenwaelder B., Obermaier B. Poustka A.Genome Res. 11:422-435(2001) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 3). Tissue: Kidney. |
| [4] | "The DNA sequence and biological annotation of human chromosome 1." Gregory S.G., Barlow K.F., McLay K.E., Kaul R., Swarbreck D., Dunham A., Scott C.E., Howe K.L., Woodfine K., Spencer C.C.A., Jones M.C., Gillson C., Searle S., Zhou Y., Kokocinski F., McDonald L., Evans R., Phillips K. Bentley D.R.Nature 441:315-321(2006) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [5] | "Initial characterization of the human central proteome." Burkard T.R., Planyavsky M., Kaupe I., Breitwieser F.P., Buerckstuemmer T., Bennett K.L., Superti-Furga G., Colinge J. BMC Syst. Biol. 5:17-17(2011) [PubMed] [Europe PMC] [Abstract] Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| EMBL GenBank DDBJ | AB020627 mRNA. Translation: BAA74843.2. Different initiation. AL136712 mRNA. Translation: CAB66647.1. AL031864 Z97195 Genomic DNA. Translation: CAI22007.1.AL121984 Z97195 Genomic DNA. Translation: CAH71952.1.AL133514 Z97195 Genomic DNA. Translation: CAH74079.1.AL137157 Z97195 Genomic DNA. Translation: CAI19211.1.AL445990 Z97195 Genomic DNA. Translation: CAH69969.1.AL445990 Z97195 Genomic DNA. Translation: CAH69970.1.AL512843 Z97195 Genomic DNA. Translation: CAH71040.1.AL512843 Z97195 Genomic DNA. Translation: CAH71041.1.AL121984 Z97195 Genomic DNA. Translation: CAH71951.1.AL133514 Z97195 Genomic DNA. Translation: CAH74080.1.Z97195 AL512843 Genomic DNA. Translation: CAI19054.1.Z97195 AL512843 Genomic DNA. Translation: CAI19055.1.AL137157 Z97195 Genomic DNA. Translation: CAI19212.1.AL031864 Z97195 Genomic DNA. Translation: CAI22008.1. | ||||||||||||
| IPI | IPI00221332. IPI00480085. IPI00895844. IPI00977141. | ||||||||||||
| RefSeq | NP_001129599.1. NM_001136127.1. NP_056384.2. NM_015569.3. | ||||||||||||
| UniGene | Hs.654775. | ||||||||||||
3D structure databases | |||||||||||||
| PDBe RCSB PDB PDBj |
| ||||||||||||
| ProteinModelPortal | Q9UQ16. | ||||||||||||
| ModBase | Search... | ||||||||||||
Protein-protein interaction databases | |||||||||||||
| IntAct | Q9UQ16. 4 interactions. | ||||||||||||
PTM databases | |||||||||||||
| PhosphoSite | Q9UQ16. | ||||||||||||
Polymorphism databases | |||||||||||||
| DMDM | 190358934. | ||||||||||||
Proteomic databases | |||||||||||||
| PaxDb | Q9UQ16. | ||||||||||||
| PRIDE | Q9UQ16. | ||||||||||||
Protocols and materials databases | |||||||||||||
| DNASU | 26052. | ||||||||||||
| StructuralBiologyKnowledgebase | Search... | ||||||||||||
Genome annotation databases | |||||||||||||
| Ensembl | ENST00000355305; ENSP00000347457; ENSG00000197959. ENST00000358155; ENSP00000350876; ENSG00000197959. ENST00000367731; ENSP00000356705; ENSG00000197959. | ||||||||||||
| GeneID | 26052. | ||||||||||||
| KEGG | hsa:26052. | ||||||||||||
| UCSC | uc001gie.3. human. uc001gif.3. human. | ||||||||||||
Organism-specific databases | |||||||||||||
| CTD | 26052. | ||||||||||||
| GeneCards | GC01P171810. | ||||||||||||
| HGNC | HGNC:29125. DNM3. | ||||||||||||
| MIM | 611445. gene. | ||||||||||||
| neXtProt | NX_Q9UQ16. | ||||||||||||
| PharmGKB | PA134954683. | ||||||||||||
| HUGE | Search... | ||||||||||||
| GenAtlas | Search... | ||||||||||||
Phylogenomic databases | |||||||||||||
| eggNOG | COG0699. | ||||||||||||
| HOVERGEN | HBG107833. | ||||||||||||
| InParanoid | Q9UQ16. | ||||||||||||
| KO | K01528. | ||||||||||||
Enzyme and pathway databases | |||||||||||||
| Reactome | REACT_111045. Developmental Biology. REACT_111102. Signal Transduction. REACT_6900. Immune System. | ||||||||||||
Gene expression databases | |||||||||||||
| ArrayExpress | Q9UQ16. | ||||||||||||
| Bgee | Q9UQ16. | ||||||||||||
| Genevestigator | Q9UQ16. | ||||||||||||
| GermOnline | ENSG00000197959. Homo sapiens. | ||||||||||||
Family and domain databases | |||||||||||||
| Gene3D | 2.30.29.30. 1 hit. | ||||||||||||
| InterPro | IPR022812. Dynamin. IPR000375. Dynamin_central. IPR001401. Dynamin_GTPase. IPR019762. Dynamin_GTPase_CS. IPR003130. GED. IPR020850. GTPase_effector_domain_GED. IPR011993. PH_like_dom. IPR001849. Pleckstrin_homology. [Graphical view] | ||||||||||||
| PANTHER | PTHR11566. PTHR11566. 1 hit. | ||||||||||||
| Pfam | PF01031. Dynamin_M. 1 hit. PF00350. Dynamin_N. 1 hit. PF02212. GED. 1 hit. PF00169. PH. 1 hit. [Graphical view] | ||||||||||||
| PRINTS | PR00195. DYNAMIN. | ||||||||||||
| SMART | SM00053. DYNc. 1 hit. SM00302. GED. 1 hit. SM00233. PH. 1 hit. [Graphical view] | ||||||||||||
| PROSITE | PS00410. DYNAMIN. 1 hit. PS51388. GED. 1 hit. PS50003. PH_DOMAIN. 1 hit. [Graphical view] | ||||||||||||
| ProtoNet | Search... | ||||||||||||
Other | |||||||||||||
| ChiTaRS | DNM3. human. | ||||||||||||
| EvolutionaryTrace | Q9UQ16. | ||||||||||||
| GenomeRNAi | 26052. | ||||||||||||
| NextBio | 47916. | ||||||||||||
| SOURCE | Search... | ||||||||||||
Entry information
| Entry name | DYN3_HUMAN | ||||||||
| Accession | Primary (citable) accession number: Q9UQ16 Secondary accession number(s): A9Z1Y1 Q9NQN6 | ||||||||
| Entry history |
| ||||||||
| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Chordata Protein Annotation Program | ||||||||
| Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. | ||||||||
Relevant documents
| Human chromosome 1 Human chromosome 1: entries, gene names and cross-references to MIM |
| MIM cross-references Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot |
| PDB cross-references Index of Protein Data Bank (PDB) cross-references |
| SIMILARITY comments Index of protein domains and families |

Clusters with
