Reviewed,
UniProtKB/Swiss-Prot Q9UNE7 (STUB1_HUMAN)
Last modified
February 9, 2010.
Version 79.
History...
Clusters with 100%,
90%,
50% identity |
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Names and origin
| Protein names | Recommended name: STIP1 homology and U box-containing protein 1 EC=6.3.2.- Alternative name(s): Carboxy terminus of Hsp70-interacting protein E3 ubiquitin-protein ligase CHIP CLL-associated antigen KW-8 Antigen NY-CO-7 | ||||||
| Gene names |
| ||||||
| Organism | Homo sapiens (Human) [Complete proteome] | ||||||
| Taxonomic identifier | 9606 [NCBI] | ||||||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo |
Protein attributes
| Sequence length | 303 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at protein level. |
General annotation (Comments)
| Function | Modulates the activity of several chaperone complexes, including Hsp70, Hsc70 and Hsp90. Has E3 ubiquitin-protein ligase activity and targets misfolded chaperone substrates towards proteasomal degradation. Mediates transfer of non-canonical short ubiquitin chains to HSPA8 that have no effect on HSPA8 degradation. Ref.2 Ref.10 Ref.11 |
| Subunit structure | Interacts with BAG2, and with the E2 ubiquitin conjugating enzymes UBE2D1, UBE2D2 and UBE2D3. Interacts with the C-terminal domains of HSPA8 and HSPA1A. Detected in a ternary complex containing STUB1, HSPA1A and HSPBP1. Ref.2 Ref.10 Ref.11 Ref.12 Ref.14 |
| Subcellular location | |
| Tissue specificity | Highly expressed in skeletal muscle, heart, pancreas, brain and placenta. Detected in kidney, liver and lung. Ref.2 |
| Post-translational modification | Auto-ubiquitinated (in vitro). Phosphorylated upon DNA damage, probably by ATM or ATR. Ref.9 Ref.13 Ref.15 Ref.16 Ref.17 Ref.18 Ref.19 Ref.20 Ref.21 Ref.23 Ref.25 |
| Involvement in disease | Antibodies against STUB1 are found in patients with chronic lymphocytic leukemia (CLL) and in colorectal cancer patients. Ref.1 Ref.3 |
| Sequence similarities | Contains 3 TPR repeats. Contains 1 U-box domain. |
Ontologies
Binary interactions
With | Entry | #Exp. | IntAct | Notes |
|---|---|---|---|---|
| ATCAY | Q86WG3 | 2 | EBI-357085,EBI-1783328 | |
| DPM3 | Q4LDX8 | 1 | EBI-357085,EBI-977313 | From a different organism. |
| HSP90AA1 | P07900 | 2 | EBI-357085,EBI-296047 | |
| HSPA1A | P08107 | 2 | EBI-357085,EBI-629985 | |
| HSPA8 | P11142 | 2 | EBI-357085,EBI-351896 | |
| MAPT | P10636 | 2 | EBI-357085,EBI-366182 | |
| UBE2Q1 | Q7Z7E8 | 2 | EBI-357085,EBI-1783287 |
Alternative products
| This entry describes 2 isoforms produced by alternative splicing. [Align] [Select] | ||||||
| Isoform 1 (identifier: Q9UNE7-1) This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry. | ||||||
| Isoform 2 (identifier: Q9UNE7-2) The sequence of this isoform differs from the canonical sequence as follows: 1-72: Missing. | ||||||
| Note: No experimental confirmation available. |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 303 | 303 | STIP1 homology and U box-containing protein 1 | PRO_0000106329 | |||||
Regions | |||||||||
| Repeat | 26 – 59 | 34 | TPR 1 | ||||||
| Repeat | 60 – 93 | 34 | TPR 2 | ||||||
| Repeat | 95 – 127 | 33 | TPR 3 | ||||||
| Domain | 226 – 300 | 75 | U-box | ||||||
Amino acid modifications | |||||||||
| Modified residue | 19 | 1 | Phosphoserine Ref.9 Ref.13 Ref.15 Ref.16 Ref.17 Ref.19 Ref.20 Ref.21 Ref.23 Ref.25 | ||||||
| Modified residue | 23 | 1 | Phosphoserine Ref.13 Ref.15 Ref.16 Ref.19 Ref.20 Ref.21 Ref.23 Ref.25 | ||||||
| Modified residue | 25 | 1 | Phosphoserine By similarity | ||||||
| Modified residue | 273 | 1 | Phosphoserine Ref.21 | ||||||
| Modified residue | 276 | 1 | Phosphothreonine Ref.18 | ||||||
Natural variations | |||||||||
| Alternative sequence | 1 – 72 | 72 | Missing in isoform 2. | VSP_015947 | |||||
Experimental info | |||||||||
| Sequence conflict | 52 | 1 | A → V in AAD33400. Ref.2 | ||||||
| Sequence conflict | 272 | 1 | R → G in AAC18038. Ref.1 | ||||||
| Sequence conflict | 280 | 1 | L → F in AAC18038. Ref.1 | ||||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "Characterization of human colon cancer antigens recognized by autologous antibodies." Scanlan M.J., Chen Y.-T., Williamson B., Gure A.O., Stockert E., Gordan J.D., Tuereci O., Sahin U., Pfreundschuh M., Old L.J. Int. J. Cancer 76:652-658(1998) [PubMed: 9610721] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1), DISEASE. Tissue: Colon carcinoma. |
| [2] | "Identification of CHIP, a novel tetratricopeptide repeat-containing protein that interacts with heat shock proteins and negatively regulates chaperone functions." Ballinger C.A., Connell P., Wu Y., Hu Z., Thompson L.J., Yin L.-Y., Patterson C. Mol. Cell. Biol. 19:4535-4545(1999) [PubMed: 10330192] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1), FUNCTION, INTERACTION WITH HSPA8 AND HSPA1A, SUBCELLULAR LOCATION, TISSUE SPECIFICITY. Tissue: Heart. |
| [3] | "Identification of tumor-associated antigens in chronic lymphocytic leukemia by SEREX." Krackhardt A.M., Witzens M., Harig S., Hodi F.S., Zauls A.J., Chessia M., Barrett P., Gribben J.G. Blood 100:2123-2131(2002) [PubMed: 12200376] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1), DISEASE. |
| [4] | "Sequence, structure and pathology of the fully annotated terminal 2 Mb of the short arm of human chromosome 16." Daniels R.J., Peden J.F., Lloyd C., Horsley S.W., Clark K., Tufarelli C., Kearney L., Buckle V.J., Doggett N.A., Flint J., Higgs D.R. Hum. Mol. Genet. 10:339-352(2001) [PubMed: 11157797] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA]. |
| [5] | "Large-scale cDNA transfection screening for genes related to cancer development and progression." Wan D., Gong Y., Qin W., Zhang P., Li J., Wei L., Zhou X., Li H., Qiu X., Zhong F., He L., Yu J., Yao G., Jiang H., Qian L., Yu Y., Shu H., Chen X. Gu J.Proc. Natl. Acad. Sci. U.S.A. 101:15724-15729(2004) [PubMed: 15498874] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 2). |
| [6] | "The sequence and analysis of duplication-rich human chromosome 16." Martin J., Han C., Gordon L.A., Terry A., Prabhakar S., She X., Xie G., Hellsten U., Chan Y.M., Altherr M., Couronne O., Aerts A., Bajorek E., Black S., Blumer H., Branscomb E., Brown N.C., Bruno W.J. Pennacchio L.A.Nature 432:988-994(2004) [PubMed: 15616553] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [7] | Mural R.J., Istrail S., Sutton G.G., Florea L., Halpern A.L., Mobarry C.M., Lippert R., Walenz B., Shatkay H., Dew I., Miller J.R., Flanigan M.J., Edwards N.J., Bolanos R., Fasulo D., Halldorsson B.V., Hannenhalli S., Turner R. Venter J.C.Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [8] | "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed: 15489334] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1). Tissue: Colon and Skin. |
| [9] | Bienvenut W.V., Waridel P., Quadroni M. Submitted (MAR-2009) to UniProtKB Cited for: PROTEIN SEQUENCE OF 13-30; 56-66; 86-119; 129-140; 155-167; 235-241; 256-263 AND 273-287, PHOSPHORYLATION AT SER-19, MASS SPECTROMETRY. Tissue: Embryonic kidney. |
| [10] | "CHIP is a U-box-dependent E3 ubiquitin ligase: identification of Hsc70 as a target for ubiquitylation." Jiang J., Ballinger C.A., Wu Y., Dai Q., Cyr D.M., Hoehfeld J., Patterson C. J. Biol. Chem. 276:42938-42944(2001) [PubMed: 11557750] [Abstract] Cited for: FUNCTION, INTERACTION WITH HSPA8; UBE2D1; UBE2D2 AND UBE2D3. |
| [11] | "The co-chaperone CHIP regulates protein triage decisions mediated by heat-shock proteins." Connell P., Ballinger C.A., Jiang J., Wu Y., Thompson L.J., Hoehfeld J., Patterson C. Nat. Cell Biol. 3:93-96(2001) [PubMed: 11146632] [Abstract] Cited for: FUNCTION, INTERACTION WITH HSP90. |
| [12] | "The cochaperone HspBP1 inhibits the CHIP ubiquitin ligase and stimulates the maturation of the cystic fibrosis transmembrane conductance regulator." Alberti S., Boehse K., Arndt V., Schmitz A., Hoehfeld J. Mol. Biol. Cell 15:4003-4010(2004) [PubMed: 15215316] [Abstract] Cited for: INTERACTION WITH HSPA1A AND HSPBP1. |
| [13] | "Large-scale characterization of HeLa cell nuclear phosphoproteins." Beausoleil S.A., Jedrychowski M., Schwartz D., Elias J.E., Villen J., Li J., Cohn M.A., Cantley L.C., Gygi S.P. Proc. Natl. Acad. Sci. U.S.A. 101:12130-12135(2004) [PubMed: 15302935] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-19 AND SER-23, MASS SPECTROMETRY. Tissue: Epithelium. |
| [14] | "Regulation of the cytoplasmic quality control protein degradation pathway by BAG2." Dai Q., Qian S.B., Li H.-H., McDonough H., Borchers C., Huang D., Takayama S., Younger J.M., Ren H.Y., Cyr D.M., Patterson C. J. Biol. Chem. 280:38673-38681(2005) [PubMed: 16169850] [Abstract] Cited for: INTERACTION WITH BAG2. |
| [15] | "Global, in vivo, and site-specific phosphorylation dynamics in signaling networks." Olsen J.V., Blagoev B., Gnad F., Macek B., Kumar C., Mortensen P., Mann M. Cell 127:635-648(2006) [PubMed: 17081983] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-19 AND SER-23, MASS SPECTROMETRY. Tissue: Epithelium. |
| [16] | "A probability-based approach for high-throughput protein phosphorylation analysis and site localization." Beausoleil S.A., Villen J., Gerber S.A., Rush J., Gygi S.P. Nat. Biotechnol. 24:1285-1292(2006) [PubMed: 16964243] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-19 AND SER-23, MASS SPECTROMETRY. Tissue: Epithelium. |
| [17] | "Global proteomic profiling of phosphopeptides using electron transfer dissociation tandem mass spectrometry." Molina H., Horn D.M., Tang N., Mathivanan S., Pandey A. Proc. Natl. Acad. Sci. U.S.A. 104:2199-2204(2007) [PubMed: 17287340] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-19, MASS SPECTROMETRY. |
| [18] | "ATM and ATR substrate analysis reveals extensive protein networks responsive to DNA damage." Matsuoka S., Ballif B.A., Smogorzewska A., McDonald E.R. III, Hurov K.E., Luo J., Bakalarski C.E., Zhao Z., Solimini N., Lerenthal Y., Shiloh Y., Gygi S.P., Elledge S.J. Science 316:1160-1166(2007) [PubMed: 17525332] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT THR-276, MASS SPECTROMETRY. |
| [19] | "Automated phosphoproteome analysis for cultured cancer cells by two-dimensional nanoLC-MS using a calcined titania/C18 biphasic column." Imami K., Sugiyama N., Kyono Y., Tomita M., Ishihama Y. Anal. Sci. 24:161-166(2008) [PubMed: 18187866] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-19 AND SER-23, MASS SPECTROMETRY. |
| [20] | "Kinase-selective enrichment enables quantitative phosphoproteomics of the kinome across the cell cycle." Daub H., Olsen J.V., Bairlein M., Gnad F., Oppermann F.S., Korner R., Greff Z., Keri G., Stemmann O., Mann M. Mol. Cell 31:438-448(2008) [PubMed: 18691976] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-19 AND SER-23, MASS SPECTROMETRY. |
| [21] | "A quantitative atlas of mitotic phosphorylation." Dephoure N., Zhou C., Villen J., Beausoleil S.A., Bakalarski C.E., Elledge S.J., Gygi S.P. Proc. Natl. Acad. Sci. U.S.A. 105:10762-10767(2008) [PubMed: 18669648] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-19; SER-23 AND SER-273, MASS SPECTROMETRY. |
| [22] | Colinge J., Superti-Furga G., Bennett K.L. Submitted (OCT-2008) to UniProtKB Cited for: IDENTIFICATION [LARGE SCALE ANALYSIS], MASS SPECTROMETRY. |
| [23] | "Lys-N and trypsin cover complementary parts of the phosphoproteome in a refined SCX-based approach." Gauci S., Helbig A.O., Slijper M., Krijgsveld J., Heck A.J., Mohammed S. Anal. Chem. 81:4493-4501(2009) [PubMed: 19413330] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-19 AND SER-23, MASS SPECTROMETRY. |
| [24] | "Large-scale proteomics analysis of the human kinome." Oppermann F.S., Gnad F., Olsen J.V., Hornberger R., Greff Z., Keri G., Mann M., Daub H. Mol. Cell. Proteomics 8:1751-1764(2009) [PubMed: 19369195] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-19, MASS SPECTROMETRY. |
| [25] | "Quantitative phosphoproteomic analysis of T cell receptor signaling reveals system-wide modulation of protein-protein interactions." Mayya V., Lundgren D.H., Hwang S.-I., Rezaul K., Wu L., Eng J.K., Rodionov V., Han D.K. Sci. Signal. 2:RA46-RA46(2009) [PubMed: 19690332] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-19 AND SER-23, MASS SPECTROMETRY. Tissue: T-cell. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | AF039689 mRNA. Translation: AAC18038.1. AF129085 mRNA. Translation: AAD33400.1. AF432221 mRNA. Translation: AAL99927.1. AF217968 mRNA. Translation: AAG17211.1. AE006464 Genomic DNA. Translation: AAK61242.1. Z92544 Genomic DNA. Translation: CAM26348.1. CH471112 Genomic DNA. Translation: EAW85758.1. BC007545 mRNA. Translation: AAH07545.1. BC017178 mRNA. Translation: AAH17178.1. BC022788 mRNA. Translation: AAH22788.1. BC063617 mRNA. Translation: AAH63617.1. |
| IPI | IPI00025156. IPI00645380. |
| RefSeq | NP_005852.2. |
| UniGene | Hs.592081 |
3D structure databases | |
| SMR | Q9UNE7. Positions 23-303. |
| ModBase | Search... |
Protein-protein interaction databases | |
| DIP | DIP-29752N. |
| IntAct | Q9UNE7. 12 interactions. |
| STRING | Q9UNE7. |
PTM databases | |
| PhosphoSite | Q9UNE7. |
Proteomic databases | |
| PRIDE | Q9UNE7. |
Genome annotation databases | |
| Ensembl | ENST00000219548; ENSP00000219548; ENSG00000103266; Homo sapiens. [Genome view] |
| GeneID | 10273. |
| KEGG | hsa:10273. |
| UCSC | uc002cit.1. human. uc002ciu.1. human. |
Organism-specific databases | |
| CTD | 10273. |
| GeneCards | GC16P000670. |
| H-InvDB | HIX0012661. |
| HGNC | HGNC:11427. STUB1. |
| MIM | 607207. gene. |
| PharmGKB | PA36227. |
| GenAtlas | Search... |
Phylogenomic databases | |
| HOGENOM | HBG378130. |
| HOVERGEN | Q9UNE7. |
| InParanoid | Q9UNE7. |
| OMA | LHSYLTR. |
| OrthoDB | EOG9JQ6HS. |
| PhylomeDB | Q9UNE7. |
Enzyme and pathway databases | |
| Pathway_Interaction_DB | alphasynuclein_pathway. Alpha-synuclein signaling. |
Gene expression databases | |
| ArrayExpress | Q9UNE7. |
| Bgee | Q9UNE7. |
| CleanEx | HS_STUB1. |
| Genevestigator | Q9UNE7. |
| GermOnline | ENSG00000103266. Homo sapiens. |
Family and domain databases | |
| InterPro | IPR013026. TPR-contain. IPR011990. TPR-like_helical. IPR019734. TPR_repeat. IPR003613. Ubox_domain. [Graphical view] |
| Gene3D | G3DSA:1.25.40.10. TPR-like_helical. 1 hit. |
| Pfam | PF04564. U-box. 1 hit. [Graphical view] |
| SMART | SM00028. TPR. 3 hits. SM00504. Ubox. 1 hit. [Graphical view] |
| PROSITE | PS50005. TPR. 3 hits. PS50293. TPR_REGION. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Other Resources | |
| NextBio | 38918. |
| SOURCE | Search... |
Entry information
| Entry name | STUB1_HUMAN | ||||||||
| Accession | Primary (citable) accession number: Q9UNE7 Secondary accession number(s): A2IDB9 Q9HBT1 | ||||||||
| Entry history |
| ||||||||
| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation project | HPI (Human Proteome Initiative) | ||||||||
| Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. | ||||||||
Relevant documents
| Human chromosome 16 Human chromosome 16: entries, gene names and cross-references to MIM |
| MIM cross-references Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot |
| SIMILARITY comments Index of protein domains and families |

Clusters with


