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Q9ULQ0

- STRP2_HUMAN

UniProt

Q9ULQ0 - STRP2_HUMAN

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Protein
Striatin-interacting protein 2
Gene
STRIP2, FAM40B, KIAA1170
Organism
Homo sapiens (Human)
Status
Reviewed - Annotation score: 4 out of 5 - Experimental evidence at protein leveli

Functioni

Plays a role in the regulation of cell morphology and cytoskeletal organization. Required in the control of cell shape.1 Publication

GO - Biological processi

  1. cell migration Source: UniProtKB
  2. cytoskeleton organization Source: UniProtKB
  3. regulation of cell shape Source: UniProtKB
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Recommended name:
Striatin-interacting protein 2
Alternative name(s):
Protein FAM40B
Gene namesi
Name:STRIP2
Synonyms:FAM40B, KIAA1170
OrganismiHomo sapiens (Human)
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
ProteomesiUP000005640: Chromosome 7

Organism-specific databases

HGNCiHGNC:22209. STRIP2.

Subcellular locationi

Cytoplasm
Note: Enriched in lamellipodia.1 Publication

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB
Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

Pathology & Biotechi

Organism-specific databases

PharmGKBiPA134923427.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 834834Striatin-interacting protein 2
PRO_0000187022Add
BLAST

Proteomic databases

MaxQBiQ9ULQ0.
PaxDbiQ9ULQ0.
PRIDEiQ9ULQ0.

PTM databases

PhosphoSiteiQ9ULQ0.

Expressioni

Gene expression databases

ArrayExpressiQ9ULQ0.
BgeeiQ9ULQ0.
CleanExiHS_FAM40B.
GenevestigatoriQ9ULQ0.

Organism-specific databases

HPAiHPA019657.

Interactioni

Subunit structurei

Component of striatin-interacting phosphatase and kinase (STRIPAK) complex By similarity. Interacts with CTTNBP2NL.1 Publication

Protein-protein interaction databases

BioGridi121534. 14 interactions.
IntActiQ9ULQ0. 15 interactions.
MINTiMINT-3082270.
STRINGi9606.ENSP00000249344.

Structurei

3D structure databases

ProteinModelPortaliQ9ULQ0.

Family & Domainsi

Compositional bias

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Compositional biasi577 – 5826Poly-Leu

Sequence similaritiesi

Belongs to the STRIP family.

Phylogenomic databases

eggNOGiNOG247682.
HOGENOMiHOG000252963.
HOVERGENiHBG081506.
InParanoidiQ9ULQ0.
OMAiMYLLVEN.
OrthoDBiEOG7W1536.
PhylomeDBiQ9ULQ0.
TreeFamiTF314205.

Family and domain databases

InterProiIPR021819. DUF3402.
IPR012486. N1221.
[Graphical view]
PfamiPF11882. DUF3402. 1 hit.
PF07923. N1221. 1 hit.
[Graphical view]

Sequences (2)i

Sequence statusi: Complete.

This entry describes 2 isoformsi produced by alternative splicing. Align

Isoform 1 (identifier: Q9ULQ0-1) [UniParc]FASTAAdd to Basket

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide

MEDPAAPGTG GPPANGNGNG GGKGKQAAPK GREAFRSQRR ESEGSVDCPT    50
LEFEYGDADG HAAELSELYS YTENLEFTNN RRCFEEDFKT QVQGKEWLEL 100
EEDAQKAYIM GLLDRLEVVS RERRLKVARA VLYLAQGTFG ECDSEVDVLH 150
WSRYNCFLLY QMGTFSTFLE LLHMEIDNSQ ACSSALRKPA VSIADSTELR 200
VLLSVMYLMV ENIRLERETD PCGWRTARET FRTELSFSMH NEEPFALLLF 250
SMVTKFCSGL APHFPIKKVL LLLWKVVMFT LGGFEHLQTL KVQKRAELGL 300
PPLAEDSIQV VKSMRAASPP SYTLDLGESQ LAPPPSKLRG RRGSRRQLLT 350
KQDSLDIYNE RDLFKTEEPA TEEEEESAGD GERTLDGELD LLEQDPLVPP 400
PPSQAPLSAE RVAFPKGLPW APKVRQKDIE HFLEMSRNKF IGFTLGQDTD 450
TLVGLPRPIH ESVKTLKQHK YISIADVQIK NEEELEKCPM SLGEEVVPET 500
PCEILYQGML YSLPQYMIAL LKILLAAAPT SKAKTDSINI LADVLPEEMP 550
ITVLQSMKLG IDVNRHKEII VKSISTLLLL LLKHFKLNHI YQFEYVSQHL 600
VFANCIPLIL KFFNQNILSY ITAKNSISVL DYPCCTIQDL PELTTESLEA 650
GDNSQFCWRN LFSCINLLRL LNKLTKWKHS RTMMLVVFKS APILKRALKV 700
KQAMLQLYVL KLLKLQTKYL GRQWRKSNMK TMSAIYQKVR HRMNDDWAYG 750
NDIDARPWDF QAEECTLRAN IEAFNSRRYD RPQDSEFSPV DNCLQSVLGQ 800
RLDLPEDFHY SYELWLEREV FSQPICWEEL LQNH 834
Length:834
Mass (Da):95,360
Last modified:July 19, 2005 - v2
Checksum:i3DAF1DA8FD6E4C4D
GO
Isoform 2 (identifier: Q9ULQ0-2) [UniParc]FASTAAdd to Basket

The sequence of this isoform differs from the canonical sequence as follows:
     752-758: DIDARPW → GESSQSS
     759-834: Missing.

Show »
Length:758
Mass (Da):86,018
Checksum:iC70233AEEB0C6690
GO

Sequence cautioni

The sequence BAA86484.1 differs from that shown. Reason: Erroneous initiation. Translation N-terminally shortened.

Natural variant

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Natural varianti383 – 3831R → Q.
Corresponds to variant rs2242030 [ dbSNP | Ensembl ].
VAR_049021

Alternative sequence

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Alternative sequencei752 – 7587DIDARPW → GESSQSS in isoform 2.
VSP_014867
Alternative sequencei759 – 83476Missing in isoform 2.
VSP_014868Add
BLAST

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AB032996 mRNA. Translation: BAA86484.1. Different initiation.
AC009244 Genomic DNA. No translation available.
BC019064 mRNA. Translation: AAH19064.1.
CCDSiCCDS34752.1. [Q9ULQ0-1]
CCDS47709.1. [Q9ULQ0-2]
RefSeqiNP_001127808.1. NM_001134336.1. [Q9ULQ0-2]
NP_065755.1. NM_020704.2. [Q9ULQ0-1]
UniGeneiHs.489988.

Genome annotation databases

EnsembliENST00000249344; ENSP00000249344; ENSG00000128578. [Q9ULQ0-1]
ENST00000435494; ENSP00000392393; ENSG00000128578. [Q9ULQ0-2]
GeneIDi57464.
KEGGihsa:57464.
UCSCiuc003vow.3. human. [Q9ULQ0-2]
uc011koy.2. human. [Q9ULQ0-1]

Polymorphism databases

DMDMi71151881.

Keywords - Coding sequence diversityi

Alternative splicing, Polymorphism

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AB032996 mRNA. Translation: BAA86484.1 . Different initiation.
AC009244 Genomic DNA. No translation available.
BC019064 mRNA. Translation: AAH19064.1 .
CCDSi CCDS34752.1. [Q9ULQ0-1 ]
CCDS47709.1. [Q9ULQ0-2 ]
RefSeqi NP_001127808.1. NM_001134336.1. [Q9ULQ0-2 ]
NP_065755.1. NM_020704.2. [Q9ULQ0-1 ]
UniGenei Hs.489988.

3D structure databases

ProteinModelPortali Q9ULQ0.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

BioGridi 121534. 14 interactions.
IntActi Q9ULQ0. 15 interactions.
MINTi MINT-3082270.
STRINGi 9606.ENSP00000249344.

PTM databases

PhosphoSitei Q9ULQ0.

Polymorphism databases

DMDMi 71151881.

Proteomic databases

MaxQBi Q9ULQ0.
PaxDbi Q9ULQ0.
PRIDEi Q9ULQ0.

Protocols and materials databases

DNASUi 57464.
Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENST00000249344 ; ENSP00000249344 ; ENSG00000128578 . [Q9ULQ0-1 ]
ENST00000435494 ; ENSP00000392393 ; ENSG00000128578 . [Q9ULQ0-2 ]
GeneIDi 57464.
KEGGi hsa:57464.
UCSCi uc003vow.3. human. [Q9ULQ0-2 ]
uc011koy.2. human. [Q9ULQ0-1 ]

Organism-specific databases

CTDi 57464.
GeneCardsi GC07P129074.
H-InvDB HIX0007066.
HGNCi HGNC:22209. STRIP2.
HPAi HPA019657.
neXtProti NX_Q9ULQ0.
PharmGKBi PA134923427.
HUGEi Search...
GenAtlasi Search...

Phylogenomic databases

eggNOGi NOG247682.
HOGENOMi HOG000252963.
HOVERGENi HBG081506.
InParanoidi Q9ULQ0.
OMAi MYLLVEN.
OrthoDBi EOG7W1536.
PhylomeDBi Q9ULQ0.
TreeFami TF314205.

Miscellaneous databases

GenomeRNAii 57464.
NextBioi 63670.
PROi Q9ULQ0.

Gene expression databases

ArrayExpressi Q9ULQ0.
Bgeei Q9ULQ0.
CleanExi HS_FAM40B.
Genevestigatori Q9ULQ0.

Family and domain databases

InterProi IPR021819. DUF3402.
IPR012486. N1221.
[Graphical view ]
Pfami PF11882. DUF3402. 1 hit.
PF07923. N1221. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Characterization of cDNA clones selected by the GeneMark analysis from size-fractionated cDNA libraries from human brain."
    Hirosawa M., Nagase T., Ishikawa K., Kikuno R., Nomura N., Ohara O.
    DNA Res. 6:329-336(1999) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1).
    Tissue: Brain.
  2. "The DNA sequence of human chromosome 7."
    Hillier L.W., Fulton R.S., Fulton L.A., Graves T.A., Pepin K.H., Wagner-McPherson C., Layman D., Maas J., Jaeger S., Walker R., Wylie K., Sekhon M., Becker M.C., O'Laughlin M.D., Schaller M.E., Fewell G.A., Delehaunty K.D., Miner T.L.
    , Nash W.E., Cordes M., Du H., Sun H., Edwards J., Bradshaw-Cordum H., Ali J., Andrews S., Isak A., Vanbrunt A., Nguyen C., Du F., Lamar B., Courtney L., Kalicki J., Ozersky P., Bielicki L., Scott K., Holmes A., Harkins R., Harris A., Strong C.M., Hou S., Tomlinson C., Dauphin-Kohlberg S., Kozlowicz-Reilly A., Leonard S., Rohlfing T., Rock S.M., Tin-Wollam A.-M., Abbott A., Minx P., Maupin R., Strowmatt C., Latreille P., Miller N., Johnson D., Murray J., Woessner J.P., Wendl M.C., Yang S.-P., Schultz B.R., Wallis J.W., Spieth J., Bieri T.A., Nelson J.O., Berkowicz N., Wohldmann P.E., Cook L.L., Hickenbotham M.T., Eldred J., Williams D., Bedell J.A., Mardis E.R., Clifton S.W., Chissoe S.L., Marra M.A., Raymond C., Haugen E., Gillett W., Zhou Y., James R., Phelps K., Iadanoto S., Bubb K., Simms E., Levy R., Clendenning J., Kaul R., Kent W.J., Furey T.S., Baertsch R.A., Brent M.R., Keibler E., Flicek P., Bork P., Suyama M., Bailey J.A., Portnoy M.E., Torrents D., Chinwalla A.T., Gish W.R., Eddy S.R., McPherson J.D., Olson M.V., Eichler E.E., Green E.D., Waterston R.H., Wilson R.K.
    Nature 424:157-164(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  3. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 2).
    Tissue: Kidney.
  4. "A PP2A phosphatase high density interaction network identifies a novel striatin-interacting phosphatase and kinase complex linked to the cerebral cavernous malformation 3 (CCM3) protein."
    Goudreault M., D'Ambrosio L.M., Kean M.J., Mullin M.J., Larsen B.G., Sanchez A., Chaudhry S., Chen G.I., Sicheri F., Nesvizhskii A.I., Aebersold R., Raught B., Gingras A.C.
    Mol. Cell. Proteomics 8:157-171(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: INTERACTION WITH CTTNBP2NL.
  5. "Identification and characterization of a set of conserved and new regulators of cytoskeletal organisation, cell morphology and migration."
    Bai S.W., Herrera-Abreu M.T., Rohn J.L., Racine V., Tajadura V., Suryavanshi N., Bechtel S., Wiemann S., Baum B., Ridley A.J.
    BMC Biol. 9:54-54(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: FUNCTION, SUBCELLULAR LOCATION.

Entry informationi

Entry nameiSTRP2_HUMAN
AccessioniPrimary (citable) accession number: Q9ULQ0
Secondary accession number(s): Q8WUZ4
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 19, 2005
Last sequence update: July 19, 2005
Last modified: July 9, 2014
This is version 84 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Human chromosome 7
    Human chromosome 7: entries, gene names and cross-references to MIM
  2. Human entries with polymorphisms or disease mutations
    List of human entries with polymorphisms or disease mutations
  3. Human polymorphisms and disease mutations
    Index of human polymorphisms and disease mutations
  4. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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