Q9ULH1 (ASAP1_HUMAN) Reviewed, UniProtKB/Swiss-Prot
Last modified
May 1, 2013.
Version 122.
History...
Names·Attributes·General annotation·Ontologies·Interactions·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Interactions·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1 Alternative name(s): 130 kDa phosphatidylinositol 4,5-bisphosphate-dependent ARF1 GTPase-activating protein ADP-ribosylation factor-directed GTPase-activating protein 1 Short name=ARF GTPase-activating protein 1 Development and differentiation-enhancing factor 1 Short name=DEF-1 Short name=Differentiation-enhancing factor 1 PIP2-dependent ARF1 GAP | ||||
| Gene names |
| ||||
| Organism | Homo sapiens (Human) [Reference proteome] | ||||
| Taxonomic identifier | 9606 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo![]() |
Protein attributes
| Sequence length | 1129 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at protein level |
General annotation (Comments)
| Function | Possesses phosphatidylinositol 4,5-bisphosphate-dependent GTPase-activating protein activity for ARF1 (ADP ribosylation factor 1) and ARF5 and a lesser activity towards ARF6. May coordinate membrane trafficking with cell growth or actin cytoskeleton remodeling by binding to both SRC and PIP2. May function as a signal transduction protein involved in the differentiation of fibroblasts into adipocytes and possibly other cell types By similarity. Plays a role in ciliogenesis. Ref.10 |
| Enzyme regulation | Activity stimulated by phosphatidylinositol 4,5-bisphosphate (PIP2) By similarity. |
| Subunit structure | Homodimer. Interacts with SRC and CRK. Interacts with RAB11FIP3. Interacts with PTK2B/PYK2 By similarity. Interacts with CTTN. Interacts (via SH3 domain) with APC. Ref.15 |
| Subcellular location | Cytoplasm By similarity. Membrane By similarity. Note: Predominantly cytoplasmic By similarity. Partially membrane-associated By similarity. |
| Domain | The PH domain most probably contributes to the phosphoinositide-dependent regulation of ADP ribosylation factors By similarity. |
| Post-translational modification | Phosphorylated on tyrosine residues by SRC By similarity. |
| Sequence similarities | Contains 2 ANK repeats. Contains 1 Arf-GAP domain. Contains 1 PH domain. Contains 1 SH3 domain. |
Ontologies
Binary interactions
With | Entry | #Exp. | IntAct | Notes |
|---|---|---|---|---|
| CRK | P46108 | 2 | EBI-346622,EBI-886 | |
| FYN | P06241 | 2 | EBI-346622,EBI-515315 | |
| GRB2 | P62993 | 7 | EBI-346622,EBI-401755 | |
| NCK1 | P16333 | 5 | EBI-346622,EBI-389883 | |
| PLCG1 | P19174 | 3 | EBI-346622,EBI-79387 | |
| SRC | P12931 | 2 | EBI-346622,EBI-621482 |
Alternative products
| This entry describes 2 isoforms produced by alternative splicing. [Align] [Select] | ||||||
| Isoform 2 (identifier: Q9ULH1-1) This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry. | ||||||
| Isoform 1 (identifier: Q9ULH1-2) The sequence of this isoform differs from the canonical sequence as follows: 303-303: E → ESRR |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||||||||||||||||||||||||||||||||||
Molecule processing | |||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 1129 | 1129 | Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1 | PRO_0000074196 | |||||||||||||||||||||||||||||||||||||
Regions | |||||||||||||||||||||||||||||||||||||||||
| Domain | 324 – 416 | 93 | PH | ||||||||||||||||||||||||||||||||||||||
| Domain | 439 – 560 | 122 | Arf-GAP | ||||||||||||||||||||||||||||||||||||||
| Repeat | 600 – 632 | 33 | ANK 1 | ||||||||||||||||||||||||||||||||||||||
| Repeat | 636 – 665 | 30 | ANK 2 | ||||||||||||||||||||||||||||||||||||||
| Domain | 1067 – 1129 | 63 | SH3 | ||||||||||||||||||||||||||||||||||||||
| Zinc finger | 454 – 477 | 24 | C4-type | ||||||||||||||||||||||||||||||||||||||
| Compositional bias | 783 – 993 | 211 | Pro-rich | ||||||||||||||||||||||||||||||||||||||
Amino acid modifications | |||||||||||||||||||||||||||||||||||||||||
| Modified residue | 717 | 1 | Phosphoserine By similarity | ||||||||||||||||||||||||||||||||||||||
| Modified residue | 843 | 1 | Phosphoserine Ref.8 Ref.9 | ||||||||||||||||||||||||||||||||||||||
| Modified residue | 1008 | 1 | Phosphoserine Ref.8 | ||||||||||||||||||||||||||||||||||||||
| Modified residue | 1027 | 1 | Phosphoserine Ref.7 Ref.9 Ref.11 | ||||||||||||||||||||||||||||||||||||||
Natural variations | |||||||||||||||||||||||||||||||||||||||||
| Alternative sequence | 303 | 1 | E → ESRR in isoform 1. | VSP_008365 | |||||||||||||||||||||||||||||||||||||
| Natural variant | 728 | 1 | I → V. Corresponds to variant rs966185 [ dbSNP | Ensembl ]. | VAR_055528 | |||||||||||||||||||||||||||||||||||||
Secondary structure | |||||||||||||||||||||||||||||||||||||||||
Helix Strand Turn | |||||||||||||||||||||||||||||||||||||||||
| Beta strand | 327 – 334 | 8 | |||||||||||||||||||||||||||||||||||||||
| Beta strand | 336 – 338 | 3 | |||||||||||||||||||||||||||||||||||||||
| Beta strand | 342 – 350 | 9 | |||||||||||||||||||||||||||||||||||||||
| Beta strand | 353 – 356 | 4 | |||||||||||||||||||||||||||||||||||||||
| Beta strand | 366 – 369 | 4 | |||||||||||||||||||||||||||||||||||||||
| Turn | 370 – 372 | 3 | |||||||||||||||||||||||||||||||||||||||
| Beta strand | 373 – 377 | 5 | |||||||||||||||||||||||||||||||||||||||
| Beta strand | 379 – 383 | 5 | |||||||||||||||||||||||||||||||||||||||
| Beta strand | 385 – 389 | 5 | |||||||||||||||||||||||||||||||||||||||
| Beta strand | 392 – 397 | 6 | |||||||||||||||||||||||||||||||||||||||
| Helix | 401 – 419 | 19 | |||||||||||||||||||||||||||||||||||||||
| Beta strand | 1070 – 1076 | 7 | |||||||||||||||||||||||||||||||||||||||
| Beta strand | 1081 – 1085 | 5 | |||||||||||||||||||||||||||||||||||||||
| Beta strand | 1093 – 1098 | 6 | |||||||||||||||||||||||||||||||||||||||
| Beta strand | 1101 – 1109 | 9 | |||||||||||||||||||||||||||||||||||||||
| Beta strand | 1116 – 1120 | 5 | |||||||||||||||||||||||||||||||||||||||
| Helix | 1121 – 1123 | 3 | |||||||||||||||||||||||||||||||||||||||
| Beta strand | 1124 – 1126 | 3 | |||||||||||||||||||||||||||||||||||||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "DNA sequence and analysis of human chromosome 8." Nusbaum C., Mikkelsen T.S., Zody M.C., Asakawa S., Taudien S., Garber M., Kodira C.D., Schueler M.G., Shimizu A., Whittaker C.A., Chang J.L., Cuomo C.A., Dewar K., FitzGerald M.G., Yang X., Allen N.R., Anderson S., Asakawa T. Lander E.S.Nature 439:331-335(2006) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [2] | Mural R.J., Istrail S., Sutton G., Florea L., Halpern A.L., Mobarry C.M., Lippert R., Walenz B., Shatkay H., Dew I., Miller J.R., Flanigan M.J., Edwards N.J., Bolanos R., Fasulo D., Halldorsson B.V., Hannenhalli S., Turner R. Venter J.C.Submitted (JUL-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [3] | "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Tissue: Brain. |
| [4] | "The full-ORF clone resource of the German cDNA consortium." Bechtel S., Rosenfelder H., Duda A., Schmidt C.P., Ernst U., Wellenreuther R., Mehrle A., Schuster C., Bahr A., Bloecker H., Heubner D., Hoerlein A., Michel G., Wedler H., Koehrer K., Ottenwaelder B., Poustka A., Wiemann S., Schupp I. BMC Genomics 8:399-399(2007) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 174-1129 (ISOFORM 2). Tissue: Bone marrow. |
| [5] | "Prediction of the coding sequences of unidentified human genes. XV. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro." Nagase T., Ishikawa K., Kikuno R., Hirosawa M., Nomura N., Ohara O. DNA Res. 6:337-345(1999) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 184-1129 (ISOFORM 1). Tissue: Brain. |
| [6] | "ASAP1, a phospholipid-dependent arf GTPase-activating protein that associates with and is phosphorylated by Src." Brown M.T., Andrade J., Radhakrishna H., Donaldson J.G., Cooper J.A., Randazzo P.A. Mol. Cell. Biol. 18:7038-7051(1998) [PubMed] [Europe PMC] [Abstract] Cited for: PARTIAL NUCLEOTIDE SEQUENCE [MRNA]. |
| [7] | "Combining protein-based IMAC, peptide-based IMAC, and MudPIT for efficient phosphoproteomic analysis." Cantin G.T., Yi W., Lu B., Park S.K., Xu T., Lee J.-D., Yates J.R. III J. Proteome Res. 7:1346-1351(2008) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-1027, MASS SPECTROMETRY. Tissue: Cervix carcinoma. |
| [8] | "Phosphoproteome of resting human platelets." Zahedi R.P., Lewandrowski U., Wiesner J., Wortelkamp S., Moebius J., Schuetz C., Walter U., Gambaryan S., Sickmann A. J. Proteome Res. 7:526-534(2008) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-843 AND SER-1008, MASS SPECTROMETRY. Tissue: Platelet. |
| [9] | "A quantitative atlas of mitotic phosphorylation." Dephoure N., Zhou C., Villen J., Beausoleil S.A., Bakalarski C.E., Elledge S.J., Gygi S.P. Proc. Natl. Acad. Sci. U.S.A. 105:10762-10767(2008) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-843 AND SER-1027, MASS SPECTROMETRY. Tissue: Cervix carcinoma. |
| [10] | "Functional genomic screen for modulators of ciliogenesis and cilium length." Kim J., Lee J.E., Heynen-Genel S., Suyama E., Ono K., Lee K., Ideker T., Aza-Blanc P., Gleeson J.G. Nature 464:1048-1051(2010) [PubMed] [Europe PMC] [Abstract] Cited for: FUNCTION. |
| [11] | "Quantitative phosphoproteomics reveals widespread full phosphorylation site occupancy during mitosis." Olsen J.V., Vermeulen M., Santamaria A., Kumar C., Miller M.L., Jensen L.J., Gnad F., Cox J., Jensen T.S., Nigg E.A., Brunak S., Mann M. Sci. Signal. 3:RA3-RA3(2010) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-1027, MASS SPECTROMETRY. Tissue: Cervix carcinoma. |
| [12] | "Targeting AMAP1 and cortactin binding bearing an atypical src homology 3/proline interface for prevention of breast cancer invasion and metastasis." Hashimoto S., Hirose M., Hashimoto A., Morishige M., Yamada A., Hosaka H., Akagi K., Ogawa E., Oneyama C., Agatsuma T., Okada M., Kobayashi H., Wada H., Nakano H., Ikegami T., Nakagawa A., Sabe H. Proc. Natl. Acad. Sci. U.S.A. 103:7036-7041(2006) [PubMed] [Europe PMC] [Abstract] Cited for: X-RAY CRYSTALLOGRAPHY (1.9 ANGSTROMS) OF 823-837 IN COMPLEX WITH CTTN. |
| [13] | "Solution structure of the PH domain of PIP2-dependent ARF1 GTPase-activating protein from human." RIKEN structural genomics initiative (RSGI) Submitted (JUN-2006) to the PDB data bank Cited for: STRUCTURE BY NMR OF 319-428. |
| [14] | "Solution structure of the SH3 domain of 130 kDA phosphatidylinositol 4,5-biphosphate-dependent ARF1 GTPase-activating protein." RIKEN structural genomics initiative (RSGI) Submitted (FEB-2009) to the PDB data bank Cited for: STRUCTURE BY NMR OF 1067-1129. |
| [15] | "Structural basis of the recognition of the SAMP motif of adenomatous polyposis coli by the Src-homology 3 domain." Kaieda S., Matsui C., Mimori-Kiyosue Y., Ikegami T. Biochemistry 49:5143-5153(2010) [PubMed] [Europe PMC] [Abstract] Cited for: STRUCTURE BY NMR OF 1069-1129 IN COMPLEX WITH APC, INTERACTION WITH APC. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| EMBL GenBank DDBJ | AC009682 Genomic DNA. No translation available. AC103725 Genomic DNA. No translation available. AC131568 Genomic DNA. No translation available. AC139019 Genomic DNA. No translation available. CH471060 Genomic DNA. Translation: EAW92130.1. BC137135 mRNA. Translation: AAI37136.1. BX537768 mRNA. Translation: CAD97831.1. AB033075 mRNA. Translation: BAA86563.1. | ||||||||||||||||||||||||||||||||||||
| IPI | IPI00376976. IPI00873747. | ||||||||||||||||||||||||||||||||||||
| RefSeq | NP_001234925.1. NM_001247996.1. NP_060952.2. NM_018482.3. | ||||||||||||||||||||||||||||||||||||
| UniGene | Hs.655552. | ||||||||||||||||||||||||||||||||||||
3D structure databases | |||||||||||||||||||||||||||||||||||||
| PDBe RCSB PDB PDBj |
| ||||||||||||||||||||||||||||||||||||
| ProteinModelPortal | Q9ULH1. | ||||||||||||||||||||||||||||||||||||
| SMR | Q9ULH1. Positions 31-429, 437-709, 1069-1129. | ||||||||||||||||||||||||||||||||||||
| ModBase | Search... | ||||||||||||||||||||||||||||||||||||
Protein-protein interaction databases | |||||||||||||||||||||||||||||||||||||
| IntAct | Q9ULH1. 11 interactions. | ||||||||||||||||||||||||||||||||||||
| MINT | MINT-243352. | ||||||||||||||||||||||||||||||||||||
| STRING | 9606.ENSP00000350297. | ||||||||||||||||||||||||||||||||||||
PTM databases | |||||||||||||||||||||||||||||||||||||
| PhosphoSite | Q9ULH1. | ||||||||||||||||||||||||||||||||||||
Polymorphism databases | |||||||||||||||||||||||||||||||||||||
| DMDM | 296439459. | ||||||||||||||||||||||||||||||||||||
Proteomic databases | |||||||||||||||||||||||||||||||||||||
| PaxDb | Q9ULH1. | ||||||||||||||||||||||||||||||||||||
| PRIDE | Q9ULH1. | ||||||||||||||||||||||||||||||||||||
Protocols and materials databases | |||||||||||||||||||||||||||||||||||||
| DNASU | 50807. | ||||||||||||||||||||||||||||||||||||
| StructuralBiologyKnowledgebase | Search... | ||||||||||||||||||||||||||||||||||||
Genome annotation databases | |||||||||||||||||||||||||||||||||||||
| Ensembl | ENST00000357668; ENSP00000350297; ENSG00000153317. ENST00000518721; ENSP00000429900; ENSG00000153317. | ||||||||||||||||||||||||||||||||||||
| GeneID | 50807. | ||||||||||||||||||||||||||||||||||||
| KEGG | hsa:50807. | ||||||||||||||||||||||||||||||||||||
| UCSC | uc003ysz.2. human. uc003yta.2. human. | ||||||||||||||||||||||||||||||||||||
Organism-specific databases | |||||||||||||||||||||||||||||||||||||
| CTD | 50807. | ||||||||||||||||||||||||||||||||||||
| GeneCards | GC08M131064. | ||||||||||||||||||||||||||||||||||||
| H-InvDB | HIX0007806. | ||||||||||||||||||||||||||||||||||||
| HGNC | HGNC:2720. ASAP1. | ||||||||||||||||||||||||||||||||||||
| HPA | CAB037292. | ||||||||||||||||||||||||||||||||||||
| MIM | 605953. gene. | ||||||||||||||||||||||||||||||||||||
| neXtProt | NX_Q9ULH1. | ||||||||||||||||||||||||||||||||||||
| PharmGKB | PA164716055. | ||||||||||||||||||||||||||||||||||||
| HUGE | Search... | ||||||||||||||||||||||||||||||||||||
| GenAtlas | Search... | ||||||||||||||||||||||||||||||||||||
Phylogenomic databases | |||||||||||||||||||||||||||||||||||||
| eggNOG | COG5347. | ||||||||||||||||||||||||||||||||||||
| HOGENOM | HOG000230570. | ||||||||||||||||||||||||||||||||||||
| HOVERGEN | HBG051327. | ||||||||||||||||||||||||||||||||||||
| KO | K12488. | ||||||||||||||||||||||||||||||||||||
| OrthoDB | EOG4PC9RD. | ||||||||||||||||||||||||||||||||||||
| PhylomeDB | Q9ULH1. | ||||||||||||||||||||||||||||||||||||
Enzyme and pathway databases | |||||||||||||||||||||||||||||||||||||
| Pathway_Interaction_DB | arf_3pathway. Arf1 pathway. | ||||||||||||||||||||||||||||||||||||
Gene expression databases | |||||||||||||||||||||||||||||||||||||
| ArrayExpress | Q9ULH1. | ||||||||||||||||||||||||||||||||||||
| Bgee | Q9ULH1. | ||||||||||||||||||||||||||||||||||||
| CleanEx | HS_ASAP1. | ||||||||||||||||||||||||||||||||||||
| Genevestigator | Q9ULH1. | ||||||||||||||||||||||||||||||||||||
| GermOnline | ENSG00000153317. Homo sapiens. | ||||||||||||||||||||||||||||||||||||
Family and domain databases | |||||||||||||||||||||||||||||||||||||
| Gene3D | 1.20.1270.60. 1 hit. 1.25.40.20. 1 hit. 2.30.29.30. 1 hit. | ||||||||||||||||||||||||||||||||||||
| InterPro | IPR027267. AH/BAR-dom. IPR002110. Ankyrin_rpt. IPR020683. Ankyrin_rpt-contain_dom. IPR001164. ArfGAP. IPR011993. PH_like_dom. IPR001849. Pleckstrin_homology. IPR001452. SH3_domain. [Graphical view] | ||||||||||||||||||||||||||||||||||||
| Pfam | PF12796. Ank_2. 1 hit. PF01412. ArfGap. 1 hit. PF00169. PH. 1 hit. PF00018. SH3_1. 1 hit. [Graphical view] | ||||||||||||||||||||||||||||||||||||
| PRINTS | PR00405. REVINTRACTNG. | ||||||||||||||||||||||||||||||||||||
| SMART | SM00248. ANK. 2 hits. SM00105. ArfGap. 1 hit. SM00233. PH. 1 hit. SM00326. SH3. 1 hit. [Graphical view] | ||||||||||||||||||||||||||||||||||||
| SUPFAM | SSF48403. ANK. 1 hit. SSF50044. SH3. 1 hit. | ||||||||||||||||||||||||||||||||||||
| PROSITE | PS50297. ANK_REP_REGION. 1 hit. PS50088. ANK_REPEAT. 1 hit. PS50115. ARFGAP. 1 hit. PS50003. PH_DOMAIN. 1 hit. PS50002. SH3. 1 hit. [Graphical view] | ||||||||||||||||||||||||||||||||||||
| ProtoNet | Search... | ||||||||||||||||||||||||||||||||||||
Other | |||||||||||||||||||||||||||||||||||||
| ChiTaRS | ASAP1. human. | ||||||||||||||||||||||||||||||||||||
| EvolutionaryTrace | Q9ULH1. | ||||||||||||||||||||||||||||||||||||
| GenomeRNAi | 50807. | ||||||||||||||||||||||||||||||||||||
| NextBio | 53242. | ||||||||||||||||||||||||||||||||||||
| SOURCE | Search... | ||||||||||||||||||||||||||||||||||||
Entry information
| Entry name | ASAP1_HUMAN | ||||||||
| Accession | Primary (citable) accession number: Q9ULH1 Secondary accession number(s): B2RNV3 | ||||||||
| Entry history |
| ||||||||
| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Chordata Protein Annotation Program | ||||||||
| Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. | ||||||||
Relevant documents
| Human chromosome 8 Human chromosome 8: entries, gene names and cross-references to MIM |
| Human entries with polymorphisms or disease mutations List of human entries with polymorphisms or disease mutations |
| Human polymorphisms and disease mutations Index of human polymorphisms and disease mutations |
| MIM cross-references Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot |
| PDB cross-references Index of Protein Data Bank (PDB) cross-references |
| SIMILARITY comments Index of protein domains and families |

Clusters with
