Q9UKZ4 (TEN1_HUMAN) Reviewed, UniProtKB/Swiss-Prot
Last modified
January 25, 2012.
Version 79.
History...
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Teneurin-1 Short name=Ten-1 Alternative name(s): Protein Odd Oz/ten-m homolog 1 Tenascin-M1 Short name=Ten-m1 | ||||
| Gene names |
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| Organism | Homo sapiens (Human) | ||||
| Taxonomic identifier | 9606 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo |
Protein attributes
| Sequence length | 2725 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at protein level |
General annotation (Comments)
| Function | May function as a cellular signal transducer. |
| Subunit structure | Homodimer; disulfide-linked By similarity. |
| Subcellular location | Membrane; Single-pass type II membrane protein Probable. |
| Tissue specificity | Expressed in fetal brain. Ref.3 |
| Domain | EGF-like domains 2 and 5 which have an odd number of cysteines might enable the formation of intermolecular disulfide bonds. Cytoplasmic proline-rich regions could serve as docking domains for intracellular SH3-containing proteins. |
| Sequence similarities | Belongs to the tenascin family. Teneurin subfamily. Contains 8 EGF-like domains. Contains 5 NHL repeats. Contains 1 teneurin N-terminal domain. Contains 23 YD repeats. |
Ontologies
| Keywords | |
|---|---|
| Cellular component | Membrane |
| Coding sequence diversity | Polymorphism |
| Domain | EGF-like domain Repeat Signal-anchor Transmembrane Transmembrane helix |
| PTM | Disulfide bond Glycoprotein Phosphoprotein |
| Technical term | Complete proteome Reference proteome |
| Gene Ontology (GO) | |
| Biological process | immune response Traceable author statement. Source: ProtInc negative regulation of cell proliferationTraceable author statement. Source: ProtInc nervous system developmentTraceable author statement. Source: ProtInc signal transductionInferred from electronic annotation. Source: InterPro |
| Cellular component | extracellular region Traceable author statement. Source: ProtInc integral to membraneInferred from electronic annotation. Source: UniProtKB-KW |
| Molecular function | heparin binding Traceable author statement. Source: ProtInc |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||||
Molecule processing | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 2725 | 2725 | Teneurin-1 | PRO_0000259498 | |||||||
Regions | |||||||||||
| Topological domain | 1 – 324 | 324 | Cytoplasmic Potential | ||||||||
| Transmembrane | 325 – 345 | 21 | Helical; Potential | ||||||||
| Topological domain | 346 – 2725 | 2380 | Extracellular Potential | ||||||||
| Domain | 1 – 318 | 318 | Teneurin N-terminal | ||||||||
| Domain | 528 – 559 | 32 | EGF-like 1 | ||||||||
| Domain | 560 – 591 | 32 | EGF-like 2 | ||||||||
| Domain | 592 – 624 | 33 | EGF-like 3 | ||||||||
| Domain | 625 – 657 | 33 | EGF-like 4 | ||||||||
| Domain | 658 – 691 | 34 | EGF-like 5 | ||||||||
| Domain | 692 – 721 | 30 | EGF-like 6 | ||||||||
| Domain | 722 – 753 | 32 | EGF-like 7 | ||||||||
| Domain | 761 – 796 | 36 | EGF-like 8 | ||||||||
| Repeat | 1194 – 1219 | 26 | NHL 1 | ||||||||
| Repeat | 1292 – 1336 | 45 | NHL 2 | ||||||||
| Repeat | 1351 – 1402 | 52 | NHL 3 | ||||||||
| Repeat | 1414 – 1458 | 45 | NHL 4 | ||||||||
| Repeat | 1481 – 1524 | 44 | NHL 5 | ||||||||
| Repeat | 1534 – 1553 | 20 | YD 1 | ||||||||
| Repeat | 1570 – 1590 | 21 | YD 2 | ||||||||
| Repeat | 1608 – 1632 | 25 | YD 3 | ||||||||
| Repeat | 1633 – 1654 | 22 | YD 4 | ||||||||
| Repeat | 1655 – 1675 | 21 | YD 5 | ||||||||
| Repeat | 1845 – 1864 | 20 | YD 6 | ||||||||
| Repeat | 1865 – 1885 | 21 | YD 7 | ||||||||
| Repeat | 1886 – 1904 | 19 | YD 8 | ||||||||
| Repeat | 1905 – 1925 | 21 | YD 9 | ||||||||
| Repeat | 1933 – 1949 | 17 | YD 10 | ||||||||
| Repeat | 1950 – 1969 | 20 | YD 11 | ||||||||
| Repeat | 1970 – 1989 | 20 | YD 12 | ||||||||
| Repeat | 1992 – 2012 | 21 | YD 13 | ||||||||
| Repeat | 2015 – 2035 | 21 | YD 14 | ||||||||
| Repeat | 2085 – 2105 | 21 | YD 15 | ||||||||
| Repeat | 2113 – 2133 | 21 | YD 16 | ||||||||
| Repeat | 2153 – 2173 | 21 | YD 17 | ||||||||
| Repeat | 2174 – 2194 | 21 | YD 18 | ||||||||
| Repeat | 2196 – 2216 | 21 | YD 19 | ||||||||
| Repeat | 2228 – 2248 | 21 | YD 20 | ||||||||
| Repeat | 2250 – 2270 | 21 | YD 21 | ||||||||
| Repeat | 2296 – 2313 | 18 | YD 22 | ||||||||
| Repeat | 2314 – 2337 | 24 | YD 23 | ||||||||
| Compositional bias | 192 – 200 | 9 | Poly-Pro | ||||||||
Amino acid modifications | |||||||||||
| Modified residue | 2580 | 1 | Phosphoserine Ref.4 | ||||||||
| Glycosylation | 433 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 905 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 1084 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 1550 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 1567 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 1663 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 1699 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 1757 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 1781 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 1842 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 2145 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 2285 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 2602 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Disulfide bond | 532 ↔ 542 | By similarity | |||||||||
| Disulfide bond | 536 ↔ 547 | By similarity | |||||||||
| Disulfide bond | 549 ↔ 558 | By similarity | |||||||||
| Disulfide bond | 567 ↔ 578 | By similarity | |||||||||
| Disulfide bond | 580 ↔ 589 | By similarity | |||||||||
| Disulfide bond | 596 ↔ 607 | By similarity | |||||||||
| Disulfide bond | 601 ↔ 612 | By similarity | |||||||||
| Disulfide bond | 614 ↔ 623 | By similarity | |||||||||
| Disulfide bond | 628 ↔ 639 | By similarity | |||||||||
| Disulfide bond | 633 ↔ 644 | By similarity | |||||||||
| Disulfide bond | 646 ↔ 655 | By similarity | |||||||||
| Disulfide bond | 666 ↔ 679 | By similarity | |||||||||
| Disulfide bond | 681 ↔ 690 | By similarity | |||||||||
| Disulfide bond | 695 ↔ 705 | By similarity | |||||||||
| Disulfide bond | 699 ↔ 710 | By similarity | |||||||||
| Disulfide bond | 712 ↔ 721 | By similarity | |||||||||
| Disulfide bond | 726 ↔ 736 | By similarity | |||||||||
| Disulfide bond | 730 ↔ 741 | By similarity | |||||||||
| Disulfide bond | 743 ↔ 752 | By similarity | |||||||||
| Disulfide bond | 765 ↔ 775 | By similarity | |||||||||
| Disulfide bond | 769 ↔ 784 | By similarity | |||||||||
| Disulfide bond | 786 ↔ 795 | By similarity | |||||||||
Natural variations | |||||||||||
| Natural variant | 40 | 1 | Y → H. Corresponds to variant rs36065191 [ dbSNP | Ensembl ]. | VAR_053792 | |||||||
| Natural variant | 342 | 1 | L → F in a breast cancer sample; somatic mutation. Ref.5 | VAR_036596 | |||||||
| Natural variant | 371 | 1 | M → T. Corresponds to variant rs2213591 [ dbSNP | Ensembl ]. | VAR_053793 | |||||||
| Natural variant | 632 | 1 | M → V. Corresponds to variant rs16999334 [ dbSNP | Ensembl ]. | VAR_053794 | |||||||
| Natural variant | 641 | 1 | K → E. Corresponds to variant rs6649271 [ dbSNP | Ensembl ]. | VAR_053795 | |||||||
| Natural variant | 1216 | 1 | V → I in a breast cancer sample; somatic mutation. Ref.5 | VAR_036597 | |||||||
| Natural variant | 1482 | 1 | F → V in a colorectal cancer sample; somatic mutation. Ref.5 | VAR_036598 | |||||||
| Natural variant | 2235 | 1 | Q → H in a breast cancer sample; somatic mutation. Ref.5 | VAR_036599 | |||||||
| Natural variant | 2396 | 1 | L → F in a colorectal cancer sample; somatic mutation. Ref.5 | VAR_036600 | |||||||
Experimental info | |||||||||||
| Sequence conflict | 261 | 1 | F → S in AAF04723. Ref.1 | ||||||||
| Sequence conflict | 1135 | 1 | G → D in AAF04723. Ref.1 | ||||||||
| Sequence conflict | 1628 | 1 | L → P in AAF04723. Ref.1 | ||||||||
| Sequence conflict | 1908 | 1 | P → S in AAF04723. Ref.1 | ||||||||
| Sequence conflict | 2133 – 2137 | 5 | MVICD → HGNMC in AAF04723. Ref.1 | ||||||||
| Sequence conflict | 2179 | 1 | N → D in AAF04723. Ref.1 | ||||||||
| Sequence conflict | 2271 – 2275 | 5 | YADLT → VDATA in AAF04723. Ref.1 | ||||||||
| Sequence conflict | 2388 – 2389 | 2 | PN → AY in AAF04723. Ref.1 | ||||||||
| Sequence conflict | 2611 | 1 | V → L in AAF04723. Ref.1 | ||||||||
Sequences
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References
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | AF100772 mRNA. Translation: AAF04723.1. AL022718 Z85995 Genomic DNA. Translation: CAI42154.1.AL023878 Z85995 Genomic DNA. Translation: CAI42975.1.AL031075 Z85995 Genomic DNA. Translation: CAI43065.1.Z81008 AL031075 Genomic DNA. Translation: CAI42710.1.Z83823 AL031075 Genomic DNA. Translation: CAI42742.1.Z85995 AL031075 Genomic DNA. Translation: CAI42721.1. |
| IPI | IPI00942033. |
| RefSeq | NP_001156750.1. NM_001163278.1. NP_001156751.1. NM_001163279.1. NP_055068.2. NM_014253.3. |
| UniGene | Hs.23796. Hs.727607. |
3D structure databases | |
| HSSP | HSSP built from PDB template 1MOX based on UniProtKB P01135. |
| ProteinModelPortal | Q9UKZ4. |
| SMR | Q9UKZ4. Positions 287-312, 531-834, 1192-1394, 1425-1460, 1491-1522. |
| ModBase | Search... |
Protein-protein interaction databases | |
| STRING | Q9UKZ4. |
PTM databases | |
| PhosphoSite | Q9UKZ4. |
Polymorphism databases | |
| DMDM | 117949792. |
Proteomic databases | |
| PRIDE | Q9UKZ4. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| Ensembl | ENST00000371130; ENSP00000360171; ENSG00000009694. |
| GeneID | 10178. |
| KEGG | hsa:10178. |
| UCSC | uc004euj.1. human. |
Organism-specific databases | |
| CTD | 10178. |
| GeneCards | GC0XM123509. |
| H-InvDB | HIX0056136. |
| HGNC | HGNC:8117. ODZ1. |
| HPA | HPA002848. |
| MIM | 300588. gene. |
| neXtProt | NX_Q9UKZ4. |
| GenAtlas | Search... |
Phylogenomic databases | |
| eggNOG | prNOG09184. |
| GeneTree | ENSGT00580000081247. |
| HOVERGEN | HBG080306. |
| InParanoid | Q9UKZ4. |
| OrthoDB | EOG498TZV. |
Gene expression databases | |
| ArrayExpress | Q9UKZ4. |
| Bgee | Q9UKZ4. |
| CleanEx | HS_ODZ1. |
| Genevestigator | Q9UKZ4. |
| GermOnline | ENSG00000009694. Homo sapiens. |
Family and domain databases | |
| InterPro | IPR011042. 6-blade_b-propeller_TolB-like. IPR006210. EGF-like. IPR013032. EGF-like_reg_CS. IPR000742. EGF_3. IPR013111. EGF_extracell. IPR009471. Ten_N. IPR006530. YD. [Graphical view] |
| Gene3D | G3DSA:2.120.10.30. 6-blade_b-propeller_TolB-like. 2 hits. |
| Pfam | PF07974. EGF_2. 2 hits. PF06484. Ten_N. 2 hits. [Graphical view] |
| SMART | SM00181. EGF. 6 hits. [Graphical view] |
| TIGRFAMs | TIGR01643. YD_repeat_2x. 3 hits. |
| PROSITE | PS00022. EGF_1. 8 hits. PS01186. EGF_2. 7 hits. PS50026. EGF_3. 5 hits. PS51125. NHL. False negative. PS51361. TENEURIN_N. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Other | |
| NextBio | 38530. |
| SOURCE | Search... |
Entry information
| Entry name | TEN1_HUMAN | ||||||||
| Accession | Primary (citable) accession number: Q9UKZ4 Secondary accession number(s): Q5JZ17 | ||||||||
| Entry history |
| ||||||||
| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Chordata Protein Annotation Program | ||||||||
| Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. | ||||||||
Relevant documents
| Human chromosome X Human chromosome X: entries, gene names and cross-references to MIM |
| Human entries with polymorphisms or disease mutations List of human entries with polymorphisms or disease mutations |
| Human polymorphisms and disease mutations Index of human polymorphisms and disease mutations |
| MIM cross-references Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot |
| SIMILARITY comments Index of protein domains and families |

Clusters with