Q9UKW4 (VAV3_HUMAN) Reviewed, UniProtKB/Swiss-Prot
Last modified
January 25, 2012.
Version 121.
History...
Names·Attributes·General annotation·Ontologies·Interactions·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Interactions·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Guanine nucleotide exchange factor VAV3 Short name=VAV-3 | ||
| Gene names |
| ||
| Organism | Homo sapiens (Human) | ||
| Taxonomic identifier | 9606 [NCBI] | ||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo |
Protein attributes
| Sequence length | 847 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at protein level |
General annotation (Comments)
| Function | Exchange factor for GTP-binding proteins RhoA, RhoG and, to a lesser extent, Rac1. Binds physically to the nucleotide-free states of those GTPases. Plays an important role in angiogenesis. Its recruitement by phosphorylated EPHA2 is critical for EFNA1-induced RAC1 GTPase activation and vascular endothelial cell migration and assembly By similarity. |
| Subunit structure | Interacts with the PH domain of APS. Interacts (via SH2 domains) with the phosphorylated form of EPHA2. Interacts with ROS1; constitutive interaction that mediates VAV3 phosphorylation. Ref.6 Ref.7 Ref.8 |
| Tissue specificity | Ubiquitously expressed. Ref.6 |
| Post-translational modification | Phosphorylated. Phosphorylation can be mediated by ROS1. Ref.6 Ref.9 |
| Sequence similarities | Contains 1 CH (calponin-homology) domain. Contains 1 DH (DBL-homology) domain. Contains 1 PH domain. Contains 1 phorbol-ester/DAG-type zinc finger. Contains 1 SH2 domain. Contains 2 SH3 domains. |
Ontologies
Binary interactions
With | Entry | #Exp. | IntAct | Notes |
|---|---|---|---|---|
| GRB2 | P62993 | 5 | EBI-297568,EBI-401755 |
Alternative products
| This entry describes 3 isoforms produced by alternative splicing. [Align] [Select] | ||||||
| Isoform 1 (identifier: Q9UKW4-1) Also known as: Alpha; This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry. | ||||||
| Isoform 2 (identifier: Q9UKW4-2) Also known as: Beta; The sequence of this isoform differs from the canonical sequence as follows: 1-107: MEPWKQCAQW...DLFDVRDFGK → MQLPDCPCRAHLP | ||||||
| Isoform 3 (identifier: Q9UKW4-3) The sequence of this isoform differs from the canonical sequence as follows: 1-560: Missing. 561-568: NCGRVNSG → MPIFTFLS |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||||||||||||||||||||
Molecule processing | |||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 847 | 847 | Guanine nucleotide exchange factor VAV3 | PRO_0000080986 | |||||||||||||||||||||||
Regions | |||||||||||||||||||||||||||
| Domain | 1 – 119 | 119 | CH | ||||||||||||||||||||||||
| Domain | 192 – 371 | 180 | DH | ||||||||||||||||||||||||
| Domain | 400 – 502 | 103 | PH | ||||||||||||||||||||||||
| Domain | 592 – 660 | 69 | SH3 1 | ||||||||||||||||||||||||
| Domain | 672 – 766 | 95 | SH2 | ||||||||||||||||||||||||
| Domain | 788 – 847 | 60 | SH3 2 | ||||||||||||||||||||||||
| Zinc finger | 513 – 562 | 50 | Phorbol-ester/DAG-type | ||||||||||||||||||||||||
| Region | 560 – 847 | 288 | Sufficient for interaction with ROS1 | ||||||||||||||||||||||||
Amino acid modifications | |||||||||||||||||||||||||||
| Modified residue | 141 | 1 | Phosphotyrosine Ref.9 | ||||||||||||||||||||||||
| Modified residue | 786 | 1 | Phosphoserine Ref.9 | ||||||||||||||||||||||||
Natural variations | |||||||||||||||||||||||||||
| Alternative sequence | 1 – 560 | 560 | Missing in isoform 3. | VSP_041360 | |||||||||||||||||||||||
| Alternative sequence | 1 – 107 | 107 | MEPWK…RDFGK → MQLPDCPCRAHLP in isoform 2. | VSP_001820 | |||||||||||||||||||||||
| Alternative sequence | 561 – 568 | 8 | NCGRVNSG → MPIFTFLS in isoform 3. | VSP_041361 | |||||||||||||||||||||||
| Natural variant | 139 | 1 | D → N. Corresponds to variant rs34318889 [ dbSNP | Ensembl ]. | VAR_061800 | |||||||||||||||||||||||
| Natural variant | 298 | 1 | T → S. Ref.1 Corresponds to variant rs7528153 [ dbSNP | Ensembl ]. | VAR_033522 | |||||||||||||||||||||||
| Natural variant | 616 | 1 | P → S. Corresponds to variant rs12410676 [ dbSNP | Ensembl ]. | VAR_051998 | |||||||||||||||||||||||
| Natural variant | 618 | 1 | Q → H. Corresponds to variant rs12403266 [ dbSNP | Ensembl ]. | VAR_033523 | |||||||||||||||||||||||
Experimental info | |||||||||||||||||||||||||||
| Sequence conflict | 107 | 1 | K → E in AAC79695. Ref.1 | ||||||||||||||||||||||||
| Sequence conflict | 217 | 1 | Y → H in AAD20348. Ref.2 | ||||||||||||||||||||||||
| Sequence conflict | 429 | 1 | V → A in AAD20348. Ref.2 | ||||||||||||||||||||||||
Secondary structure | |||||||||||||||||||||||||||
Helix Strand Turn | |||||||||||||||||||||||||||
| Helix | 3 – 13 | 11 | |||||||||||||||||||||||||
| Helix | 30 – 38 | 9 | |||||||||||||||||||||||||
| Helix | 41 – 50 | 10 | |||||||||||||||||||||||||
| Helix | 57 – 59 | 3 | |||||||||||||||||||||||||
| Helix | 68 – 84 | 17 | |||||||||||||||||||||||||
| Turn | 90 – 92 | 3 | |||||||||||||||||||||||||
| Helix | 96 – 100 | 5 | |||||||||||||||||||||||||
| Helix | 106 – 115 | 10 | |||||||||||||||||||||||||
| Helix | 121 – 124 | 4 | |||||||||||||||||||||||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "Non-stoichiometric reduced complexity probes for cDNA arrays." Trenkle T., Welsh J., Jung B., Mathieu-Daude F., McClelland M. Nucleic Acids Res. 26:3883-3891(1998) [PubMed: 9705494] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1), VARIANT SER-298. Tissue: Colon carcinoma and Mammary gland. |
| [2] | "Biological and regulatory properties of Vav-3, a new member of the Vav family of oncoproteins." Movilla N., Bustelo X.R. Mol. Cell. Biol. 19:7870-7885(1999) [PubMed: 10523675] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORMS 1 AND 2), ALTERNATIVE SPLICING. |
| [3] | "Complete sequencing and characterization of 21,243 full-length human cDNAs." Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S. Sugano S.Nat. Genet. 36:40-45(2004) [PubMed: 14702039] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 3). Tissue: Trachea. |
| [4] | "The DNA sequence and biological annotation of human chromosome 1." Gregory S.G., Barlow K.F., McLay K.E., Kaul R., Swarbreck D., Dunham A., Scott C.E., Howe K.L., Woodfine K., Spencer C.C.A., Jones M.C., Gillson C., Searle S., Zhou Y., Kokocinski F., McDonald L., Evans R., Phillips K. Bentley D.R.Nature 441:315-321(2006) [PubMed: 16710414] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [5] | Mural R.J., Istrail S., Sutton G.G., Florea L., Halpern A.L., Mobarry C.M., Lippert R., Walenz B., Shatkay H., Dew I., Miller J.R., Flanigan M.J., Edwards N.J., Bolanos R., Fasulo D., Halldorsson B.V., Hannenhalli S., Turner R. Venter J.C.Submitted (JUL-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [6] | "Vav3 mediates receptor protein tyrosine kinase signaling, regulates GTPase activity, modulates cell morphology, and induces cell transformation." Zeng L., Sachdev P., Yan L., Chan J.L., Trenkle T., McClelland M., Welsh J., Wang L.H. Mol. Cell. Biol. 20:9212-9224(2000) [PubMed: 11094073] [Abstract] Cited for: INTERACTION WITH ROS1, PHOSPHORYLATION, TISSUE SPECIFICITY. |
| [7] | "Adaptor protein APS binds the NH2-terminal autoinhibitory domain of guanine nucleotide exchange factor Vav3 and augments its activity." Yabana N., Shibuya M. Oncogene 21:7720-7729(2002) [PubMed: 12400014] [Abstract] Cited for: INTERACTION WITH APS. |
| [8] | "Essential role of Vav family guanine nucleotide exchange factors in EphA receptor-mediated angiogenesis." Hunter S.G., Zhuang G., Brantley-Sieders D.M., Swat W., Cowan C.W., Chen J. Mol. Cell. Biol. 26:4830-4842(2006) [PubMed: 16782872] [Abstract] Cited for: INTERACTION WITH EPHA2. |
| [9] | "Quantitative phosphoproteomic analysis of T cell receptor signaling reveals system-wide modulation of protein-protein interactions." Mayya V., Lundgren D.H., Hwang S.-I., Rezaul K., Wu L., Eng J.K., Rodionov V., Han D.K. Sci. Signal. 2:RA46-RA46(2009) [PubMed: 19690332] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT TYR-141 AND SER-786, MASS SPECTROMETRY. Tissue: Leukemic T-cell. |
| [10] | "Solution structure of the CH domain from human VAV-3 protein." RIKEN structural genomics initiative (RSGI) Submitted (DEC-2006) to the PDB data bank Cited for: STRUCTURE BY NMR OF 1-134. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| EMBL GenBank DDBJ | AF067817 mRNA. Translation: AAC79695.1. AF118887 mRNA. Translation: AAD20349.1. AF118886 mRNA. Translation: AAD20348.1. AK304088 mRNA. Translation: BAG64994.1. AK316295 mRNA. Translation: BAH14666.1. AL391235 AL591042 Genomic DNA. Translation: CAH72458.1.AL513206 AL591042 Genomic DNA. Translation: CAH73195.1.AL513206, AC114491, AL591042 Genomic DNA. Translation: CAH73196.1. AL591042 AL513206 Genomic DNA. Translation: CAI14457.1.AL591042, AC114491, AL513206 Genomic DNA. Translation: CAI14458.1. AL353892 AL591042 Genomic DNA. Translation: CAI21786.1.CH471156 Genomic DNA. Translation: EAW51252.1. | ||||||||||||
| IPI | IPI00219689. IPI00299763. IPI00976117. | ||||||||||||
| RefSeq | NP_001073343.1. NM_001079874.1. NP_006104.4. NM_006113.4. | ||||||||||||
| UniGene | Hs.267659. | ||||||||||||
3D structure databases | |||||||||||||
| PDBe RCSB PDB PDBj |
| ||||||||||||
| ProteinModelPortal | Q9UKW4. | ||||||||||||
| SMR | Q9UKW4. Positions 1-563, 586-846. | ||||||||||||
| ModBase | Search... | ||||||||||||
Protein-protein interaction databases | |||||||||||||
| IntAct | Q9UKW4. 3 interactions. | ||||||||||||
| MINT | MINT-256977. | ||||||||||||
| STRING | Q9UKW4. | ||||||||||||
PTM databases | |||||||||||||
| PhosphoSite | Q9UKW4. | ||||||||||||
Polymorphism databases | |||||||||||||
| DMDM | 12643372. | ||||||||||||
Proteomic databases | |||||||||||||
| PRIDE | Q9UKW4. | ||||||||||||
Protocols and materials databases | |||||||||||||
| StructuralBiologyKnowledgebase | Search... | ||||||||||||
Genome annotation databases | |||||||||||||
| Ensembl | ENST00000370056; ENSP00000359073; ENSG00000134215. ENST00000415432; ENSP00000394897; ENSG00000134215. | ||||||||||||
| GeneID | 10451. | ||||||||||||
| KEGG | hsa:10451. | ||||||||||||
| UCSC | uc001dvk.1. human. | ||||||||||||
Organism-specific databases | |||||||||||||
| CTD | 10451. | ||||||||||||
| GeneCards | GC01M108113. | ||||||||||||
| H-InvDB | HIX0000831. | ||||||||||||
| HGNC | HGNC:12659. VAV3. | ||||||||||||
| HPA | CAB002012. HPA028138. | ||||||||||||
| MIM | 605541. gene. | ||||||||||||
| neXtProt | NX_Q9UKW4. | ||||||||||||
| PharmGKB | PA37282. | ||||||||||||
| GenAtlas | Search... | ||||||||||||
Phylogenomic databases | |||||||||||||
| eggNOG | prNOG17321. | ||||||||||||
| GeneTree | ENSGT00600000084023. | ||||||||||||
| HOVERGEN | HBG018066. | ||||||||||||
| InParanoid | Q9UKW4. | ||||||||||||
| OMA | IIDLQQY. | ||||||||||||
| OrthoDB | EOG4TB49P. | ||||||||||||
| PhylomeDB | Q9UKW4. | ||||||||||||
Enzyme and pathway databases | |||||||||||||
| Pathway_Interaction_DB | ar_pathway. Coregulation of Androgen receptor activity. epha_fwdpathway. EPHA forward signaling. epha2_fwdpathway. EPHA2 forward signaling. avb3_integrin_pathway. Integrins in angiogenesis. avb3_opn_pathway. Osteopontin-mediated events. | ||||||||||||
| Reactome | REACT_111102. Signal Transduction. REACT_604. Hemostasis. | ||||||||||||
Gene expression databases | |||||||||||||
| ArrayExpress | Q9UKW4. | ||||||||||||
| Bgee | Q9UKW4. | ||||||||||||
| CleanEx | HS_VAV3. | ||||||||||||
| Genevestigator | Q9UKW4. | ||||||||||||
| GermOnline | ENSG00000134215. Homo sapiens. | ||||||||||||
Family and domain databases | |||||||||||||
| InterPro | IPR001715. CH-domain. IPR000219. DH-domain. IPR001331. GDS_CDC24_CS. IPR011993. PH_type. IPR001849. Pleckstrin_homology. IPR002219. Prot_Kinase_C-like_PE/DAG-bd. IPR000980. SH2. IPR011511. SH3_2. IPR001452. SH3_domain. IPR003096. SM22_calponin. [Graphical view] | ||||||||||||
| Gene3D | G3DSA:1.10.418.10. Calponin-homology. 1 hit. G3DSA:2.30.29.30. PH_type. 1 hit. G3DSA:1.20.900.10. RhoGEF. 1 hit. G3DSA:3.30.505.10. SH2. 1 hit. | ||||||||||||
| KO | K05730. | ||||||||||||
| Pfam | PF00130. C1_1. 1 hit. PF00307. CH. 1 hit. PF00169. PH. 1 hit. PF00621. RhoGEF. 1 hit. PF00017. SH2. 1 hit. PF07653. SH3_2. 2 hits. [Graphical view] | ||||||||||||
| PRINTS | PR00401. SH2DOMAIN. PR00452. SH3DOMAIN. PR00888. SM22CALPONIN. | ||||||||||||
| SMART | SM00109. C1. 1 hit. SM00033. CH. 1 hit. SM00233. PH. 1 hit. SM00325. RhoGEF. 1 hit. SM00252. SH2. 1 hit. SM00326. SH3. 2 hits. [Graphical view] | ||||||||||||
| SUPFAM | SSF47576. Calponin-homology. 1 hit. SSF48065. DH-domain. 1 hit. SSF50044. SH3. 2 hits. | ||||||||||||
| PROSITE | PS50021. CH. 1 hit. PS00741. DH_1. 1 hit. PS50010. DH_2. 1 hit. PS50003. PH_DOMAIN. 1 hit. PS50001. SH2. 1 hit. PS50002. SH3. 2 hits. PS00479. ZF_DAG_PE_1. 1 hit. PS50081. ZF_DAG_PE_2. 1 hit. [Graphical view] | ||||||||||||
| ProtoNet | Search... | ||||||||||||
Other | |||||||||||||
| NextBio | 39617. | ||||||||||||
| SOURCE | Search... | ||||||||||||
Entry information
| Entry name | VAV3_HUMAN | ||||||||
| Accession | Primary (citable) accession number: Q9UKW4 Secondary accession number(s): B1AMM0 Q9Y5X8 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Chordata Protein Annotation Program | ||||||||
| Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. | ||||||||
Relevant documents
| Human chromosome 1 Human chromosome 1: entries, gene names and cross-references to MIM |
| Human entries with polymorphisms or disease mutations List of human entries with polymorphisms or disease mutations |
| Human polymorphisms and disease mutations Index of human polymorphisms and disease mutations |
| MIM cross-references Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot |
| PDB cross-references Index of Protein Data Bank (PDB) cross-references |
| SIMILARITY comments Index of protein domains and families |

Clusters with