ID ADA28_HUMAN Reviewed; 775 AA. AC Q9UKQ2; B2RMV5; Q9Y339; Q9Y3S0; DT 20-JUN-2001, integrated into UniProtKB/Swiss-Prot. DT 11-JAN-2011, sequence version 3. DT 24-JAN-2024, entry version 199. DE RecName: Full=Disintegrin and metalloproteinase domain-containing protein 28; DE Short=ADAM 28; DE EC=3.4.24.-; DE AltName: Full=Epididymal metalloproteinase-like, disintegrin-like, and cysteine-rich protein II; DE Short=eMDC II; DE AltName: Full=Metalloproteinase-like, disintegrin-like, and cysteine-rich protein L; DE Short=MDC-L; DE Flags: Precursor; GN Name=ADAM28; Synonyms=ADAM23, MDCL; OS Homo sapiens (Human). OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. OX NCBI_TaxID=9606; RN [1] RP NUCLEOTIDE SEQUENCE [MRNA] (ISOFORMS 1 AND 2), AND VARIANT MET-765. RC TISSUE=Lymph node; RX PubMed=10506182; DOI=10.1074/jbc.274.41.29251; RA Roberts C.M., Tani P.H., Bridges L.C., Laszik Z., Bowditch R.D.; RT "MDC-L, a novel metalloprotease disintegrin cysteine-rich protein family RT member expressed by human lymphocytes."; RL J. Biol. Chem. 274:29251-29259(1999). RN [2] RP NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1), AND VARIANT MET-765. RC TISSUE=Epididymis; RX PubMed=10587367; DOI=10.1093/molehr/5.12.1127; RA Jury J.A., Perry A.C., Hall L.; RT "Identification, sequence analysis and expression of transcripts encoding a RT putative metalloproteinase, eMDC II, in human and macaque epididymis."; RL Mol. Hum. Reprod. 5:1127-1134(1999). RN [3] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RX PubMed=16421571; DOI=10.1038/nature04406; RA Nusbaum C., Mikkelsen T.S., Zody M.C., Asakawa S., Taudien S., Garber M., RA Kodira C.D., Schueler M.G., Shimizu A., Whittaker C.A., Chang J.L., RA Cuomo C.A., Dewar K., FitzGerald M.G., Yang X., Allen N.R., Anderson S., RA Asakawa T., Blechschmidt K., Bloom T., Borowsky M.L., Butler J., Cook A., RA Corum B., DeArellano K., DeCaprio D., Dooley K.T., Dorris L. III, RA Engels R., Gloeckner G., Hafez N., Hagopian D.S., Hall J.L., Ishikawa S.K., RA Jaffe D.B., Kamat A., Kudoh J., Lehmann R., Lokitsang T., Macdonald P., RA Major J.E., Matthews C.D., Mauceli E., Menzel U., Mihalev A.H., RA Minoshima S., Murayama Y., Naylor J.W., Nicol R., Nguyen C., O'Leary S.B., RA O'Neill K., Parker S.C.J., Polley A., Raymond C.K., Reichwald K., RA Rodriguez J., Sasaki T., Schilhabel M., Siddiqui R., Smith C.L., RA Sneddon T.P., Talamas J.A., Tenzin P., Topham K., Venkataraman V., Wen G., RA Yamazaki S., Young S.K., Zeng Q., Zimmer A.R., Rosenthal A., Birren B.W., RA Platzer M., Shimizu N., Lander E.S.; RT "DNA sequence and analysis of human chromosome 8."; RL Nature 439:331-335(2006). RN [4] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA], AND VARIANT MET-765. RA Mural R.J., Istrail S., Sutton G., Florea L., Halpern A.L., Mobarry C.M., RA Lippert R., Walenz B., Shatkay H., Dew I., Miller J.R., Flanigan M.J., RA Edwards N.J., Bolanos R., Fasulo D., Halldorsson B.V., Hannenhalli S., RA Turner R., Yooseph S., Lu F., Nusskern D.R., Shue B.C., Zheng X.H., RA Zhong F., Delcher A.L., Huson D.H., Kravitz S.A., Mouchard L., Reinert K., RA Remington K.A., Clark A.G., Waterman M.S., Eichler E.E., Adams M.D., RA Hunkapiller M.W., Myers E.W., Venter J.C.; RL Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases. RN [5] RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA], AND VARIANT MET-765. RC TISSUE=Brain; RX PubMed=15489334; DOI=10.1101/gr.2596504; RG The MGC Project Team; RT "The status, quality, and expansion of the NIH full-length cDNA project: RT the Mammalian Gene Collection (MGC)."; RL Genome Res. 14:2121-2127(2004). RN [6] RP VARIANTS GLU-65; GLU-134; GLU-450; PHE-482 AND ASP-502. RX PubMed=21618342; DOI=10.1002/humu.21477; RA Wei X., Moncada-Pazos A., Cal S., Soria-Valles C., Gartner J., Rudloff U., RA Lin J.C., Rosenberg S.A., Lopez-Otin C., Samuels Y.; RT "Analysis of the disintegrin-metalloproteinases family reveals ADAM29 and RT ADAM7 are often mutated in melanoma."; RL Hum. Mutat. 32:E2148-E2175(2011). CC -!- FUNCTION: May play a role in the adhesive and proteolytic events that CC occur during lymphocyte emigration or may function in ectodomain CC shedding of lymphocyte surface target proteins, such as FASL and CD40L. CC May be involved in sperm maturation. CC -!- COFACTOR: CC Name=Zn(2+); Xref=ChEBI:CHEBI:29105; Evidence={ECO:0000250}; CC Note=Binds 1 zinc ion per subunit. {ECO:0000250}; CC -!- INTERACTION: CC Q9UKQ2; P00749: PLAU; NbExp=3; IntAct=EBI-1384181, EBI-3905042; CC -!- SUBCELLULAR LOCATION: [Isoform 1]: Cell membrane; Single-pass type I CC membrane protein. CC -!- SUBCELLULAR LOCATION: [Isoform 2]: Secreted. CC -!- ALTERNATIVE PRODUCTS: CC Event=Alternative splicing; Named isoforms=2; CC Name=1; Synonyms=MDC-LM; CC IsoId=Q9UKQ2-1; Sequence=Displayed; CC Name=2; Synonyms=MDC-LS; CC IsoId=Q9UKQ2-2; Sequence=VSP_005486, VSP_005487; CC -!- TISSUE SPECIFICITY: Expressed predominantly in secondary lymphoid CC tissues, such as lymph node, spleen, small intestine, stomach, colon, CC appendix and trachea. The lymphocyte population is responsible for CC expression of this protein in these tissues. Isoform 2 is expressed CC preferentially in spleen. CC -!- DOMAIN: The conserved cysteine present in the cysteine-switch motif CC binds the catalytic zinc ion, thus inhibiting the enzyme. The CC dissociation of the cysteine from the zinc ion upon the activation- CC peptide release activates the enzyme. CC -!- PTM: Pro-domain removal and maturation may be, at least in part, CC autocatalytic. {ECO:0000250}. CC --------------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution (CC BY 4.0) License CC --------------------------------------------------------------------------- DR EMBL; AF137334; AAD25099.1; -; mRNA. DR EMBL; AF137335; AAD25100.1; -; mRNA. DR EMBL; AJ242015; CAB42085.1; -; mRNA. DR EMBL; AC044891; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR EMBL; AC120193; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR EMBL; CH471080; EAW63609.1; -; Genomic_DNA. DR EMBL; BC136478; AAI36479.1; -; mRNA. DR CCDS; CCDS34865.1; -. [Q9UKQ2-1] DR CCDS; CCDS47830.1; -. [Q9UKQ2-2] DR RefSeq; NP_001291280.1; NM_001304351.1. DR RefSeq; NP_055080.2; NM_014265.5. [Q9UKQ2-1] DR RefSeq; NP_068547.2; NM_021777.4. [Q9UKQ2-2] DR AlphaFoldDB; Q9UKQ2; -. DR SMR; Q9UKQ2; -. DR BioGRID; 116072; 5. DR IntAct; Q9UKQ2; 1. DR STRING; 9606.ENSP00000265769; -. DR DrugBank; DB08733; (2R,3R)-N^1^-[(1S)-2,2-DIMETHYL-1-(METHYLCARBAMOYL)PROPYL]-N^4^-HYDROXY-2-(2-METHYLPROPYL)-3-{[(1,3-THIAZOL-2-YLCARBONYL)AMINO]METHYL}BUTANEDIAMIDE. DR DrugBank; DB02996; 2-(Thiomethylene)-4-Methylpentanoic Acid. DR DrugBank; DB03880; Batimastat. DR DrugBank; DB02215; Furoyl-Leucine. DR DrugBank; DB02255; Ilomastat. DR DrugBank; DB02046; N-[(Furan-2-Yl)Carbonyl]-(S)-Leucyl-(R)-[1-Amino-2(1h-Indol-3-Yl)Ethyl]-Phosphonic Acid. DR DrugBank; DB03088; Pidolic acid. DR MEROPS; M12.224; -. DR TCDB; 8.A.77.1.3; the sheddase (sheddase) family. DR GlyCosmos; Q9UKQ2; 5 sites, No reported glycans. DR GlyGen; Q9UKQ2; 6 sites. DR iPTMnet; Q9UKQ2; -. DR PhosphoSitePlus; Q9UKQ2; -. DR BioMuta; ADAM28; -. DR DMDM; 317373485; -. DR jPOST; Q9UKQ2; -. DR MassIVE; Q9UKQ2; -. DR PaxDb; 9606-ENSP00000265769; -. DR PeptideAtlas; Q9UKQ2; -. DR ProteomicsDB; 84834; -. [Q9UKQ2-1] DR ProteomicsDB; 84835; -. [Q9UKQ2-2] DR Antibodypedia; 58742; 272 antibodies from 24 providers. DR DNASU; 10863; -. DR Ensembl; ENST00000265769.9; ENSP00000265769.4; ENSG00000042980.14. [Q9UKQ2-1] DR Ensembl; ENST00000437154.6; ENSP00000393699.2; ENSG00000042980.14. [Q9UKQ2-2] DR GeneID; 10863; -. DR KEGG; hsa:10863; -. DR MANE-Select; ENST00000265769.9; ENSP00000265769.4; NM_014265.6; NP_055080.2. DR UCSC; uc003xdx.4; human. [Q9UKQ2-1] DR AGR; HGNC:206; -. DR CTD; 10863; -. DR DisGeNET; 10863; -. DR GeneCards; ADAM28; -. DR HGNC; HGNC:206; ADAM28. DR HPA; ENSG00000042980; Group enriched (epididymis, stomach). DR MIM; 606188; gene. DR neXtProt; NX_Q9UKQ2; -. DR OpenTargets; ENSG00000042980; -. DR PharmGKB; PA24523; -. DR VEuPathDB; HostDB:ENSG00000042980; -. DR eggNOG; KOG3607; Eukaryota. DR GeneTree; ENSGT00940000156716; -. DR HOGENOM; CLU_012714_7_1_1; -. DR InParanoid; Q9UKQ2; -. DR OMA; CKANDAM; -. DR OrthoDB; 5406290at2759; -. DR PhylomeDB; Q9UKQ2; -. DR TreeFam; TF314733; -. DR PathwayCommons; Q9UKQ2; -. DR SignaLink; Q9UKQ2; -. DR BioGRID-ORCS; 10863; 12 hits in 1155 CRISPR screens. DR ChiTaRS; ADAM28; human. DR GeneWiki; ADAM28; -. DR GenomeRNAi; 10863; -. DR Pharos; Q9UKQ2; Tbio. DR PRO; PR:Q9UKQ2; -. DR Proteomes; UP000005640; Chromosome 8. DR RNAct; Q9UKQ2; Protein. DR Bgee; ENSG00000042980; Expressed in corpus epididymis and 171 other cell types or tissues. DR ExpressionAtlas; Q9UKQ2; baseline and differential. DR GO; GO:0005576; C:extracellular region; IEA:UniProtKB-SubCell. DR GO; GO:0005739; C:mitochondrion; IDA:HPA. DR GO; GO:0005886; C:plasma membrane; IDA:HPA. DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW. DR GO; GO:0004222; F:metalloendopeptidase activity; IBA:GO_Central. DR GO; GO:0008237; F:metallopeptidase activity; IDA:BHF-UCL. DR GO; GO:0006508; P:proteolysis; IBA:GO_Central. DR GO; GO:0007283; P:spermatogenesis; TAS:ProtInc. DR CDD; cd04269; ZnMc_adamalysin_II_like; 1. DR Gene3D; 3.40.1620.60; -; 1. DR Gene3D; 3.40.390.10; Collagenase (Catalytic Domain); 1. DR Gene3D; 4.10.70.10; Disintegrin domain; 1. DR InterPro; IPR006586; ADAM_Cys-rich. DR InterPro; IPR018358; Disintegrin_CS. DR InterPro; IPR001762; Disintegrin_dom. DR InterPro; IPR036436; Disintegrin_dom_sf. DR InterPro; IPR000742; EGF-like_dom. DR InterPro; IPR024079; MetalloPept_cat_dom_sf. DR InterPro; IPR001590; Peptidase_M12B. DR InterPro; IPR002870; Peptidase_M12B_N. DR InterPro; IPR034027; Reprolysin_adamalysin. DR PANTHER; PTHR11905; ADAM A DISINTEGRIN AND METALLOPROTEASE DOMAIN; 1. DR PANTHER; PTHR11905:SF32; DISINTEGRIN AND METALLOPROTEINASE DOMAIN-CONTAINING PROTEIN 28; 1. DR Pfam; PF08516; ADAM_CR; 1. DR Pfam; PF00200; Disintegrin; 1. DR Pfam; PF01562; Pep_M12B_propep; 1. DR Pfam; PF01421; Reprolysin; 1. DR PRINTS; PR00289; DISINTEGRIN. DR SMART; SM00608; ACR; 1. DR SMART; SM00050; DISIN; 1. DR SUPFAM; SSF57552; Blood coagulation inhibitor (disintegrin); 1. DR SUPFAM; SSF55486; Metalloproteases ('zincins'), catalytic domain; 1. DR PROSITE; PS50215; ADAM_MEPRO; 1. DR PROSITE; PS00427; DISINTEGRIN_1; 1. DR PROSITE; PS50214; DISINTEGRIN_2; 1. DR PROSITE; PS01186; EGF_2; 1. DR PROSITE; PS50026; EGF_3; 1. DR PROSITE; PS00142; ZINC_PROTEASE; 1. DR Genevisible; Q9UKQ2; HS. PE 1: Evidence at protein level; KW Alternative splicing; Cell membrane; Cleavage on pair of basic residues; KW Disulfide bond; EGF-like domain; Glycoprotein; Hydrolase; Membrane; KW Metal-binding; Metalloprotease; Protease; Reference proteome; Secreted; KW Signal; Transmembrane; Transmembrane helix; Zinc; Zymogen. FT SIGNAL 1..18 FT /evidence="ECO:0000255" FT PROPEP 19..198 FT /evidence="ECO:0000250" FT /id="PRO_0000029128" FT CHAIN 199..775 FT /note="Disintegrin and metalloproteinase domain-containing FT protein 28" FT /id="PRO_0000029129" FT TOPO_DOM 199..665 FT /note="Extracellular" FT /evidence="ECO:0000255" FT TRANSMEM 666..686 FT /note="Helical" FT /evidence="ECO:0000255" FT TOPO_DOM 687..775 FT /note="Cytoplasmic" FT /evidence="ECO:0000255" FT DOMAIN 204..399 FT /note="Peptidase M12B" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00276" FT DOMAIN 407..493 FT /note="Disintegrin" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00068" FT DOMAIN 625..657 FT /note="EGF-like" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00076" FT REGION 690..775 FT /note="Disordered" FT /evidence="ECO:0000256|SAM:MobiDB-lite" FT MOTIF 167..174 FT /note="Cysteine switch" FT /evidence="ECO:0000250" FT COMPBIAS 690..704 FT /note="Basic and acidic residues" FT /evidence="ECO:0000256|SAM:MobiDB-lite" FT ACT_SITE 340 FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00276, FT ECO:0000255|PROSITE-ProRule:PRU10095" FT BINDING 169 FT /ligand="Zn(2+)" FT /ligand_id="ChEBI:CHEBI:29105" FT /ligand_note="catalytic" FT /note="in inhibited form" FT /evidence="ECO:0000250" FT BINDING 339 FT /ligand="Zn(2+)" FT /ligand_id="ChEBI:CHEBI:29105" FT /ligand_note="catalytic" FT /evidence="ECO:0000250" FT BINDING 343 FT /ligand="Zn(2+)" FT /ligand_id="ChEBI:CHEBI:29105" FT /ligand_note="catalytic" FT /evidence="ECO:0000250" FT BINDING 349 FT /ligand="Zn(2+)" FT /ligand_id="ChEBI:CHEBI:29105" FT /ligand_note="catalytic" FT /evidence="ECO:0000250" FT CARBOHYD 268 FT /note="N-linked (GlcNAc...) asparagine" FT /evidence="ECO:0000255" FT CARBOHYD 275 FT /note="N-linked (GlcNAc...) asparagine" FT /evidence="ECO:0000255" FT CARBOHYD 557 FT /note="N-linked (GlcNAc...) asparagine" FT /evidence="ECO:0000255" FT CARBOHYD 602 FT /note="N-linked (GlcNAc...) asparagine" FT /evidence="ECO:0000255" FT CARBOHYD 628 FT /note="N-linked (GlcNAc...) asparagine" FT /evidence="ECO:0000255" FT DISULFID 315..394 FT /evidence="ECO:0000250" FT DISULFID 354..378 FT /evidence="ECO:0000250" FT DISULFID 356..361 FT /evidence="ECO:0000250" FT DISULFID 465..485 FT /evidence="ECO:0000250" FT DISULFID 629..639 FT /evidence="ECO:0000250" FT DISULFID 633..645 FT /evidence="ECO:0000250" FT DISULFID 647..656 FT /evidence="ECO:0000250" FT VAR_SEQ 524..540 FT /note="TEVADKSCYNRNEGGSK -> RRTNPFPCACAKENHFR (in isoform FT 2)" FT /evidence="ECO:0000303|PubMed:10506182" FT /id="VSP_005486" FT VAR_SEQ 541..775 FT /note="Missing (in isoform 2)" FT /evidence="ECO:0000303|PubMed:10506182" FT /id="VSP_005487" FT VARIANT 65 FT /note="G -> E (in a cutaneous metastatic melanoma sample; FT somatic mutation)" FT /evidence="ECO:0000269|PubMed:21618342" FT /id="VAR_066317" FT VARIANT 134 FT /note="G -> E (in a cutaneous metastatic melanoma sample; FT somatic mutation; dbSNP:rs267601860)" FT /evidence="ECO:0000269|PubMed:21618342" FT /id="VAR_066318" FT VARIANT 219 FT /note="R -> M (in dbSNP:rs9314282)" FT /id="VAR_057067" FT VARIANT 226 FT /note="E -> D (in dbSNP:rs17736699)" FT /id="VAR_057068" FT VARIANT 450 FT /note="G -> E (in a cutaneous metastatic melanoma sample; FT somatic mutation; dbSNP:rs267601862)" FT /evidence="ECO:0000269|PubMed:21618342" FT /id="VAR_066319" FT VARIANT 482 FT /note="S -> F (in a cutaneous metastatic melanoma sample; FT somatic mutation)" FT /evidence="ECO:0000269|PubMed:21618342" FT /id="VAR_066320" FT VARIANT 493 FT /note="N -> S (in dbSNP:rs7001647)" FT /id="VAR_057069" FT VARIANT 502 FT /note="G -> D (in a cutaneous metastatic melanoma sample; FT somatic mutation; dbSNP:rs267601864)" FT /evidence="ECO:0000269|PubMed:21618342" FT /id="VAR_066321" FT VARIANT 593 FT /note="T -> K (in dbSNP:rs36041430)" FT /id="VAR_057070" FT VARIANT 604 FT /note="T -> P (in dbSNP:rs35617826)" FT /id="VAR_057071" FT VARIANT 684 FT /note="M -> I (in dbSNP:rs7829965)" FT /id="VAR_057072" FT VARIANT 765 FT /note="V -> M (in dbSNP:rs7814768)" FT /evidence="ECO:0000269|PubMed:10506182, FT ECO:0000269|PubMed:10587367, ECO:0000269|PubMed:15489334, FT ECO:0000269|Ref.4" FT /id="VAR_024596" FT CONFLICT 513 FT /note="Q -> R (in Ref. 1; AAD25099/AAD25100)" FT /evidence="ECO:0000305" FT CONFLICT 774 FT /note="K -> E (in Ref. 1; AAD25099)" FT /evidence="ECO:0000305" SQ SEQUENCE 775 AA; 87148 MW; 895E0985840F971C CRC64; MLQGLLPVSL LLSVAVSAIK ELPGVKKYEV VYPIRLHPLH KREAKEPEQQ EQFETELKYK MTINGKIAVL YLKKNKNLLA PGYTETYYNS TGKEITTSPQ IMDDCYYQGH ILNEKVSDAS ISTCRGLRGY FSQGDQRYFI EPLSPIHRDG QEHALFKYNP DEKNYDSTCG MDGVLWAHDL QQNIALPATK LVKLKDRKVQ EHEKYIEYYL VLDNGEFKRY NENQDEIRKR VFEMANYVNM LYKKLNTHVA LVGMEIWTDK DKIKITPNAS FTLENFSKWR GSVLSRRKRH DIAQLITATE LAGTTVGLAF MSTMCSPYSV GVVQDHSDNL LRVAGTMAHE MGHNFGMFHD DYSCKCPSTI CVMDKALSFY IPTDFSSCSR LSYDKFFEDK LSNCLFNAPL PTDIISTPIC GNQLVEMGED CDCGTSEECT NICCDAKTCK IKATFQCALG ECCEKCQFKK AGMVCRPAKD ECDLPEMCNG KSGNCPDDRF QVNGFPCHHG KGHCLMGTCP TLQEQCTELW GPGTEVADKS CYNRNEGGSK YGYCRRVDDT LIPCKANDTM CGKLFCQGGS DNLPWKGRIV TFLTCKTFDP EDTSQEIGMV ANGTKCGDNK VCINAECVDI EKAYKSTNCS SKCKGHAVCD HELQCQCEEG WIPPDCDDSS VVFHFSIVVG VLFPMAVIFV VVAMVIRHQS SREKQKKDQR PLSTTGTRPH KQKRKPQMVK AVQPQEMSQM KPHVYDLPVE GNEPPASFHK DTNALPPTVF KDNPVSTPKD SNPKA //