ID MRT4_HUMAN Reviewed; 239 AA. AC Q9UKD2; B3KNB3; Q5TG55; Q96SS6; Q9BPV9; DT 16-AUG-2004, integrated into UniProtKB/Swiss-Prot. DT 16-AUG-2004, sequence version 2. DT 27-MAR-2024, entry version 180. DE RecName: Full=mRNA turnover protein 4 homolog {ECO:0000250|UniProtKB:P33201}; DE AltName: Full=Ribosome assembly factor MRTO4 {ECO:0000250|UniProtKB:P33201, ECO:0000305}; GN Name=MRTO4; Synonyms=C1orf33, MRT4; OS Homo sapiens (Human). OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. OX NCBI_TaxID=9606; RN [1] RP NUCLEOTIDE SEQUENCE [MRNA]. RA Ge H.; RL Submitted (JUL-1999) to the EMBL/GenBank/DDBJ databases. RN [2] RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. RC TISSUE=Testis; RA Zou S.W., Miao S.Y., Zhang X.D., Qiao Y., Wang L.F.; RL Submitted (MAY-2003) to the EMBL/GenBank/DDBJ databases. RN [3] RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. RX PubMed=14702039; DOI=10.1038/ng1285; RA Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., RA Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., RA Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S., RA Yamamoto J., Saito K., Kawai Y., Isono Y., Nakamura Y., Nagahari K., RA Murakami K., Yasuda T., Iwayanagi T., Wagatsuma M., Shiratori A., Sudo H., RA Hosoiri T., Kaku Y., Kodaira H., Kondo H., Sugawara M., Takahashi M., RA Kanda K., Yokoi T., Furuya T., Kikkawa E., Omura Y., Abe K., Kamihara K., RA Katsuta N., Sato K., Tanikawa M., Yamazaki M., Ninomiya K., Ishibashi T., RA Yamashita H., Murakawa K., Fujimori K., Tanai H., Kimata M., Watanabe M., RA Hiraoka S., Chiba Y., Ishida S., Ono Y., Takiguchi S., Watanabe S., RA Yosida M., Hotuta T., Kusano J., Kanehori K., Takahashi-Fujii A., Hara H., RA Tanase T.-O., Nomura Y., Togiya S., Komai F., Hara R., Takeuchi K., RA Arita M., Imose N., Musashino K., Yuuki H., Oshima A., Sasaki N., RA Aotsuka S., Yoshikawa Y., Matsunawa H., Ichihara T., Shiohata N., Sano S., RA Moriya S., Momiyama H., Satoh N., Takami S., Terashima Y., Suzuki O., RA Nakagawa S., Senoh A., Mizoguchi H., Goto Y., Shimizu F., Wakebe H., RA Hishigaki H., Watanabe T., Sugiyama A., Takemoto M., Kawakami B., RA Yamazaki M., Watanabe K., Kumagai A., Itakura S., Fukuzumi Y., Fujimori Y., RA Komiyama M., Tashiro H., Tanigami A., Fujiwara T., Ono T., Yamada K., RA Fujii Y., Ozaki K., Hirao M., Ohmori Y., Kawabata A., Hikiji T., RA Kobatake N., Inagaki H., Ikema Y., Okamoto S., Okitani R., Kawakami T., RA Noguchi S., Itoh T., Shigeta K., Senba T., Matsumura K., Nakajima Y., RA Mizuno T., Morinaga M., Sasaki M., Togashi T., Oyama M., Hata H., RA Watanabe M., Komatsu T., Mizushima-Sugano J., Satoh T., Shirai Y., RA Takahashi Y., Nakagawa K., Okumura K., Nagase T., Nomura N., Kikuchi H., RA Masuho Y., Yamashita R., Nakai K., Yada T., Nakamura Y., Ohara O., RA Isogai T., Sugano S.; RT "Complete sequencing and characterization of 21,243 full-length human RT cDNAs."; RL Nat. Genet. 36:40-45(2004). RN [4] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RX PubMed=16710414; DOI=10.1038/nature04727; RA Gregory S.G., Barlow K.F., McLay K.E., Kaul R., Swarbreck D., Dunham A., RA Scott C.E., Howe K.L., Woodfine K., Spencer C.C.A., Jones M.C., Gillson C., RA Searle S., Zhou Y., Kokocinski F., McDonald L., Evans R., Phillips K., RA Atkinson A., Cooper R., Jones C., Hall R.E., Andrews T.D., Lloyd C., RA Ainscough R., Almeida J.P., Ambrose K.D., Anderson F., Andrew R.W., RA Ashwell R.I.S., Aubin K., Babbage A.K., Bagguley C.L., Bailey J., RA Beasley H., Bethel G., Bird C.P., Bray-Allen S., Brown J.Y., Brown A.J., RA Buckley D., Burton J., Bye J., Carder C., Chapman J.C., Clark S.Y., RA Clarke G., Clee C., Cobley V., Collier R.E., Corby N., Coville G.J., RA Davies J., Deadman R., Dunn M., Earthrowl M., Ellington A.G., Errington H., RA Frankish A., Frankland J., French L., Garner P., Garnett J., Gay L., RA Ghori M.R.J., Gibson R., Gilby L.M., Gillett W., Glithero R.J., RA Grafham D.V., Griffiths C., Griffiths-Jones S., Grocock R., Hammond S., RA Harrison E.S.I., Hart E., Haugen E., Heath P.D., Holmes S., Holt K., RA Howden P.J., Hunt A.R., Hunt S.E., Hunter G., Isherwood J., James R., RA Johnson C., Johnson D., Joy A., Kay M., Kershaw J.K., Kibukawa M., RA Kimberley A.M., King A., Knights A.J., Lad H., Laird G., Lawlor S., RA Leongamornlert D.A., Lloyd D.M., Loveland J., Lovell J., Lush M.J., RA Lyne R., Martin S., Mashreghi-Mohammadi M., Matthews L., Matthews N.S.W., RA McLaren S., Milne S., Mistry S., Moore M.J.F., Nickerson T., O'Dell C.N., RA Oliver K., Palmeiri A., Palmer S.A., Parker A., Patel D., Pearce A.V., RA Peck A.I., Pelan S., Phelps K., Phillimore B.J., Plumb R., Rajan J., RA Raymond C., Rouse G., Saenphimmachak C., Sehra H.K., Sheridan E., RA Shownkeen R., Sims S., Skuce C.D., Smith M., Steward C., Subramanian S., RA Sycamore N., Tracey A., Tromans A., Van Helmond Z., Wall M., Wallis J.M., RA White S., Whitehead S.L., Wilkinson J.E., Willey D.L., Williams H., RA Wilming L., Wray P.W., Wu Z., Coulson A., Vaudin M., Sulston J.E., RA Durbin R.M., Hubbard T., Wooster R., Dunham I., Carter N.P., McVean G., RA Ross M.T., Harrow J., Olson M.V., Beck S., Rogers J., Bentley D.R.; RT "The DNA sequence and biological annotation of human chromosome 1."; RL Nature 441:315-321(2006). RN [5] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RA Mural R.J., Istrail S., Sutton G.G., Florea L., Halpern A.L., Mobarry C.M., RA Lippert R., Walenz B., Shatkay H., Dew I., Miller J.R., Flanigan M.J., RA Edwards N.J., Bolanos R., Fasulo D., Halldorsson B.V., Hannenhalli S., RA Turner R., Yooseph S., Lu F., Nusskern D.R., Shue B.C., Zheng X.H., RA Zhong F., Delcher A.L., Huson D.H., Kravitz S.A., Mouchard L., Reinert K., RA Remington K.A., Clark A.G., Waterman M.S., Eichler E.E., Adams M.D., RA Hunkapiller M.W., Myers E.W., Venter J.C.; RL Submitted (JUL-2005) to the EMBL/GenBank/DDBJ databases. RN [6] RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. RC TISSUE=Lung; RX PubMed=15489334; DOI=10.1101/gr.2596504; RG The MGC Project Team; RT "The status, quality, and expansion of the NIH full-length cDNA project: RT the Mammalian Gene Collection (MGC)."; RL Genome Res. 14:2121-2127(2004). RN [7] RP SUBCELLULAR LOCATION [LARGE SCALE ANALYSIS]. RC TISSUE=Cervix carcinoma; RX PubMed=12429849; DOI=10.1091/mbc.e02-05-0271; RA Scherl A., Coute Y., Deon C., Calle A., Kindbeiter K., Sanchez J.-C., RA Greco A., Hochstrasser D.F., Diaz J.-J.; RT "Functional proteomic analysis of human nucleolus."; RL Mol. Biol. Cell 13:4100-4109(2002). RN [8] RP FUNCTION, SUBUNIT, AND SUBCELLULAR LOCATION. RX PubMed=20083226; DOI=10.1016/j.biocel.2010.01.011; RA Michalec B., Krokowski D., Grela P., Wawiorka L., Sawa-Makarska J., RA Grankowski N., Tchorzewski M.; RT "Subcellular localization of ribosomal P0-like protein MRT4 is determined RT by its N-terminal domain."; RL Int. J. Biochem. Cell Biol. 42:736-748(2010). RN [9] RP IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]. RX PubMed=21269460; DOI=10.1186/1752-0509-5-17; RA Burkard T.R., Planyavsky M., Kaupe I., Breitwieser F.P., Buerckstuemmer T., RA Bennett K.L., Superti-Furga G., Colinge J.; RT "Initial characterization of the human central proteome."; RL BMC Syst. Biol. 5:17-17(2011). RN [10] RP IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]. RC TISSUE=Cervix carcinoma, and Erythroleukemia; RX PubMed=23186163; DOI=10.1021/pr300630k; RA Zhou H., Di Palma S., Preisinger C., Peng M., Polat A.N., Heck A.J., RA Mohammed S.; RT "Toward a comprehensive characterization of a human cancer cell RT phosphoproteome."; RL J. Proteome Res. 12:260-271(2013). RN [11] RP INTERACTION WITH MINAS-60. RX PubMed=35393574; DOI=10.1038/s41589-022-01003-9; RA Cao X., Khitun A., Harold C.M., Bryant C.J., Zheng S.J., Baserga S.J., RA Slavoff S.A.; RT "Nascent alt-protein chemoproteomics reveals a pre-60S assembly checkpoint RT inhibitor."; RL Nat. Chem. Biol. 0:0-0(2022). CC -!- FUNCTION: Component of the ribosome assembly machinery. Nuclear paralog CC of the ribosomal protein P0, it binds pre-60S subunits at an early CC stage of assembly in the nucleolus, and is replaced by P0 in CC cytoplasmic pre-60S subunits and mature 80S ribosomes. CC {ECO:0000269|PubMed:20083226}. CC -!- SUBUNIT: Associates with the pre-60S ribosomal particle CC (PubMed:20083226). Interacts with MINAS-60 (product of an alternative CC open reading frame of RBM10) (PubMed:35393574). CC {ECO:0000269|PubMed:20083226, ECO:0000269|PubMed:35393574}. CC -!- INTERACTION: CC Q9UKD2; Q9NYB0: TERF2IP; NbExp=2; IntAct=EBI-1046493, EBI-750109; CC -!- SUBCELLULAR LOCATION: Nucleus, nucleolus {ECO:0000269|PubMed:12429849, CC ECO:0000269|PubMed:20083226}. Cytoplasm {ECO:0000269|PubMed:20083226}. CC Note=Shuttles between the nucleus and the cytoplasm. CC {ECO:0000269|PubMed:20083226}. CC -!- SIMILARITY: Belongs to the universal ribosomal protein uL10 family. CC {ECO:0000305}. CC --------------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution (CC BY 4.0) License CC --------------------------------------------------------------------------- DR EMBL; AF173378; AAD52608.1; -; mRNA. DR EMBL; AY303790; AAP68821.1; -; mRNA. DR EMBL; AK024227; BAG51275.1; -; mRNA. DR EMBL; AK027569; BAB55205.1; -; mRNA. DR EMBL; AL035413; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR EMBL; CH471134; EAW94873.1; -; Genomic_DNA. DR EMBL; BC003013; AAH03013.1; -; mRNA. DR EMBL; BC006504; AAH06504.1; -; mRNA. DR CCDS; CCDS191.1; -. DR RefSeq; NP_057267.2; NM_016183.3. DR PDB; 8FKR; EM; 2.89 A; SQ=1-239. DR PDB; 8FKS; EM; 2.88 A; SQ=1-239. DR PDB; 8FKT; EM; 2.81 A; SQ=1-239. DR PDB; 8FKU; EM; 2.82 A; SQ=1-239. DR PDB; 8FKV; EM; 2.47 A; SQ=1-239. DR PDB; 8FKW; EM; 2.50 A; SQ=1-239. DR PDB; 8FKX; EM; 2.59 A; SQ=1-239. DR PDB; 8FKY; EM; 2.67 A; SQ=1-239. DR PDB; 8FKZ; EM; 3.04 A; SQ=1-239. DR PDB; 8FL0; EM; 2.91 A; SQ=1-239. DR PDB; 8FL2; EM; 2.67 A; SQ=1-239. DR PDB; 8FL3; EM; 2.53 A; SQ=1-239. DR PDB; 8FL4; EM; 2.89 A; SQ=1-239. DR PDB; 8FL6; EM; 2.62 A; SQ=1-239. DR PDB; 8FL7; EM; 2.55 A; SQ=1-239. DR PDB; 8FL9; EM; 2.75 A; SQ=1-239. DR PDB; 8FLA; EM; 2.63 A; SQ=1-239. DR PDB; 8FLB; EM; 2.55 A; SQ=1-239. DR PDB; 8FLC; EM; 2.76 A; SQ=1-239. DR PDB; 8FLD; EM; 2.58 A; SQ=1-239. DR PDB; 8FLE; EM; 2.48 A; SQ=1-239. DR PDB; 8FLF; EM; 2.65 A; SQ=1-239. DR PDB; 8IDT; EM; 2.80 A; J=1-239. DR PDB; 8IDY; EM; 3.00 A; J=1-239. DR PDB; 8IE3; EM; 3.30 A; J=1-239. DR PDB; 8INE; EM; 3.20 A; J=1-239. DR PDB; 8INF; EM; 3.00 A; J=1-239. DR PDB; 8INK; EM; 3.20 A; v=1-239. DR PDB; 8IPD; EM; 3.20 A; v=1-239. DR PDB; 8IPX; EM; 4.30 A; v=1-239. DR PDB; 8IPY; EM; 3.20 A; v=1-239. DR PDB; 8IR1; EM; 3.30 A; v=1-239. DR PDB; 8IR3; EM; 3.50 A; v=1-239. DR PDBsum; 8FKR; -. DR PDBsum; 8FKS; -. DR PDBsum; 8FKT; -. DR PDBsum; 8FKU; -. DR PDBsum; 8FKV; -. DR PDBsum; 8FKW; -. DR PDBsum; 8FKX; -. DR PDBsum; 8FKY; -. DR PDBsum; 8FKZ; -. DR PDBsum; 8FL0; -. DR PDBsum; 8FL2; -. DR PDBsum; 8FL3; -. DR PDBsum; 8FL4; -. DR PDBsum; 8FL6; -. DR PDBsum; 8FL7; -. DR PDBsum; 8FL9; -. DR PDBsum; 8FLA; -. DR PDBsum; 8FLB; -. DR PDBsum; 8FLC; -. DR PDBsum; 8FLD; -. DR PDBsum; 8FLE; -. DR PDBsum; 8FLF; -. DR PDBsum; 8IDT; -. DR PDBsum; 8IDY; -. DR PDBsum; 8IE3; -. DR PDBsum; 8INE; -. DR PDBsum; 8INF; -. DR PDBsum; 8INK; -. DR PDBsum; 8IPD; -. DR PDBsum; 8IPX; -. DR PDBsum; 8IPY; -. DR PDBsum; 8IR1; -. DR PDBsum; 8IR3; -. DR AlphaFoldDB; Q9UKD2; -. DR EMDB; EMD-29254; -. DR EMDB; EMD-29255; -. DR EMDB; EMD-29256; -. DR EMDB; EMD-29257; -. DR EMDB; EMD-29258; -. DR EMDB; EMD-29259; -. DR EMDB; EMD-29260; -. DR EMDB; EMD-29261; -. DR EMDB; EMD-29262; -. DR EMDB; EMD-29263; -. DR EMDB; EMD-29265; -. DR EMDB; EMD-29266; -. DR EMDB; EMD-29267; -. DR EMDB; EMD-29268; -. DR EMDB; EMD-29269; -. DR EMDB; EMD-29271; -. DR EMDB; EMD-29272; -. DR EMDB; EMD-29273; -. DR EMDB; EMD-29274; -. DR EMDB; EMD-29275; -. DR EMDB; EMD-29276; -. DR EMDB; EMD-29277; -. DR EMDB; EMD-35370; -. DR EMDB; EMD-35371; -. DR EMDB; EMD-35375; -. DR EMDB; EMD-35596; -. DR EMDB; EMD-35597; -. DR EMDB; EMD-35599; -. DR EMDB; EMD-35639; -. DR EMDB; EMD-35649; -. DR EMDB; EMD-35651; -. DR EMDB; EMD-35672; -. DR EMDB; EMD-35673; -. DR SMR; Q9UKD2; -. DR BioGRID; 119337; 180. DR IntAct; Q9UKD2; 71. DR MINT; Q9UKD2; -. DR STRING; 9606.ENSP00000364320; -. DR GlyGen; Q9UKD2; 1 site, 1 O-linked glycan (1 site). DR iPTMnet; Q9UKD2; -. DR PhosphoSitePlus; Q9UKD2; -. DR SwissPalm; Q9UKD2; -. DR BioMuta; MRTO4; -. DR DMDM; 51316541; -. DR EPD; Q9UKD2; -. DR jPOST; Q9UKD2; -. DR MassIVE; Q9UKD2; -. DR MaxQB; Q9UKD2; -. DR PaxDb; 9606-ENSP00000364320; -. DR PeptideAtlas; Q9UKD2; -. DR ProteomicsDB; 84768; -. DR Pumba; Q9UKD2; -. DR Antibodypedia; 29590; 232 antibodies from 26 providers. DR DNASU; 51154; -. DR Ensembl; ENST00000330263.5; ENSP00000364320.3; ENSG00000053372.5. DR GeneID; 51154; -. DR KEGG; hsa:51154; -. DR MANE-Select; ENST00000330263.5; ENSP00000364320.3; NM_016183.4; NP_057267.2. DR UCSC; uc001bbs.4; human. DR AGR; HGNC:18477; -. DR CTD; 51154; -. DR GeneCards; MRTO4; -. DR HGNC; HGNC:18477; MRTO4. DR HPA; ENSG00000053372; Low tissue specificity. DR MIM; 620476; gene. DR neXtProt; NX_Q9UKD2; -. DR OpenTargets; ENSG00000053372; -. DR PharmGKB; PA162396216; -. DR VEuPathDB; HostDB:ENSG00000053372; -. DR eggNOG; KOG0816; Eukaryota. DR GeneTree; ENSGT00390000006238; -. DR HOGENOM; CLU_071690_3_0_1; -. DR InParanoid; Q9UKD2; -. DR OMA; LEWAENY; -. DR OrthoDB; 23333at2759; -. DR PhylomeDB; Q9UKD2; -. DR TreeFam; TF300111; -. DR PathwayCommons; Q9UKD2; -. DR SignaLink; Q9UKD2; -. DR BioGRID-ORCS; 51154; 623 hits in 1165 CRISPR screens. DR ChiTaRS; MRTO4; human. DR GenomeRNAi; 51154; -. DR Pharos; Q9UKD2; Tbio. DR PRO; PR:Q9UKD2; -. DR Proteomes; UP000005640; Chromosome 1. DR RNAct; Q9UKD2; Protein. DR Bgee; ENSG00000053372; Expressed in oocyte and 176 other cell types or tissues. DR ExpressionAtlas; Q9UKD2; baseline and differential. DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. DR GO; GO:0005730; C:nucleolus; IBA:GO_Central. DR GO; GO:0030687; C:preribosome, large subunit precursor; IBA:GO_Central. DR GO; GO:0003723; F:RNA binding; HDA:UniProtKB. DR GO; GO:0000956; P:nuclear-transcribed mRNA catabolic process; IBA:GO_Central. DR GO; GO:0042273; P:ribosomal large subunit biogenesis; IBA:GO_Central. DR GO; GO:0006364; P:rRNA processing; IBA:GO_Central. DR CDD; cd05796; Ribosomal_P0_like; 1. DR Gene3D; 3.30.70.1730; -; 1. DR Gene3D; 3.90.105.20; -; 1. DR InterPro; IPR033867; Mrt4. DR InterPro; IPR001790; Ribosomal_uL10. DR InterPro; IPR040637; Ribosomal_uL10-like_insert. DR InterPro; IPR043164; Ribosomal_uL10-like_insert_sf. DR InterPro; IPR043141; Ribosomal_uL10-like_sf. DR PANTHER; PTHR45841:SF1; MRNA TURNOVER PROTEIN 4 HOMOLOG; 1. DR PANTHER; PTHR45841; MRNA TURNOVER PROTEIN 4 MRTO4; 1. DR Pfam; PF00466; Ribosomal_L10; 1. DR Pfam; PF17777; RL10P_insert; 1. DR SUPFAM; SSF160369; Ribosomal protein L10-like; 1. DR SWISS-2DPAGE; Q9UKD2; -. DR Genevisible; Q9UKD2; HS. PE 1: Evidence at protein level; KW 3D-structure; Cytoplasm; Nucleus; Phosphoprotein; Reference proteome; KW Ribosome biogenesis. FT CHAIN 1..239 FT /note="mRNA turnover protein 4 homolog" FT /id="PRO_0000154816" FT REGION 215..239 FT /note="Disordered" FT /evidence="ECO:0000256|SAM:MobiDB-lite" FT COMPBIAS 225..239 FT /note="Acidic residues" FT /evidence="ECO:0000256|SAM:MobiDB-lite" FT MOD_RES 225 FT /note="Phosphoserine" FT /evidence="ECO:0000250|UniProtKB:Q9D0I8" FT MOD_RES 229 FT /note="Phosphoserine" FT /evidence="ECO:0000250|UniProtKB:Q9D0I8" FT MOD_RES 233 FT /note="Phosphoserine" FT /evidence="ECO:0000250|UniProtKB:Q9D0I8" FT CONFLICT 95 FT /note="R -> T (in Ref. 1; AAD52608)" FT /evidence="ECO:0000305" FT CONFLICT 235 FT /note="S -> L (in Ref. 3; BAB55205)" FT /evidence="ECO:0000305" SQ SEQUENCE 239 AA; 27560 MW; F1BFF6E566FF942F CRC64; MPKSKRDKKV SLTKTAKKGL ELKQNLIEEL RKCVDTYKYL FIFSVANMRN SKLKDIRNAW KHSRMFFGKN KVMMVALGRS PSDEYKDNLH QVSKRLRGEV GLLFTNRTKE EVNEWFTKYT EMDYARAGNK AAFTVSLDPG PLEQFPHSME PQLRQLGLPT ALKRGVVTLL SDYEVCKEGD VLTPEQARVL KLFGYEMAEF KVTIKYMWDS QSGRFQQMGD DLPESASEST EESDSEDDD //