Reviewed,
UniProtKB/Swiss-Prot Q9UK85 (DKKL1_HUMAN)
Last modified
January 19, 2010.
Version 73.
History...
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Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Binary interactions · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents
Names and origin
| Protein names | Recommended name: Dickkopf-like protein 1 Alternative name(s): Protein soggy-1 Short name=SGY-1 Cancer/testis antigen 34 Short name=CT34 | ||||||
| Gene names |
| ||||||
| Organism | Homo sapiens (Human) [Complete proteome] | ||||||
| Taxonomic identifier | 9606 [NCBI] | ||||||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo |
Protein attributes
| Sequence length | 242 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is further processed into a mature form. |
| Protein existence | Evidence at protein level. |
General annotation (Comments)
| Subcellular location | |
| Post-translational modification | N-glycosylated. |
| Sequence similarities | To the N-terminal section of DKK-3. |
Ontologies
| Keywords | |
|---|---|
| Cellular component | Secreted |
| Coding sequence diversity | Polymorphism |
| Domain | Signal |
| PTM | Glycoprotein Phosphoprotein |
| Technical term | Complete proteome |
| Gene Ontology (GO) | |
| Biological process | anatomical structure morphogenesis Ref.1 Traceable author statement. Source: ProtInc |
| Cellular component | extracellular space Ref.1 Traceable author statement. Source: ProtInc |
| Molecular function | protein binding Inferred from physical interaction. Source: IntAct signal transducer activity Ref.1Traceable author statement. Source: ProtInc |
| Complete GO annotation... | |
Binary interactions
With | Entry | #Exp. | IntAct | Notes |
|---|---|---|---|---|
| ABL1 | P00519 | 1 | EBI-1753048,EBI-375543 | |
| CRK | P46108 | 1 | EBI-1753048,EBI-886 | |
| FYN | P06241 | 1 | EBI-1753048,EBI-515315 |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Signal peptide | 1 – 30 | 30 | Potential | ||||||
| Chain | 31 – 242 | 212 | Dickkopf-like protein 1 | PRO_0000007228 | |||||
Amino acid modifications | |||||||||
| Modified residue | 223 | 1 | Phosphoserine Ref.5 | ||||||
| Modified residue | 226 | 1 | Phosphoserine Ref.5 | ||||||
| Glycosylation | 97 | 1 | N-linked (GlcNAc...) Potential | ||||||
| Glycosylation | 112 | 1 | N-linked (GlcNAc...) Potential | ||||||
Natural variations | |||||||||
| Natural variant | 24 | 1 | L → R: dbSNP rs2303757. | VAR_053061 | |||||
| Natural variant | 29 | 1 | A → T: dbSNP rs919364. | VAR_024432 | |||||
| Natural variant | 104 | 1 | L → I: dbSNP rs35693137. | VAR_053062 | |||||
| Natural variant | 109 | 1 | M → R: dbSNP rs2303759. | VAR_021967 | |||||
| Natural variant | 187 | 1 | G → S: dbSNP rs1054770. | VAR_053063 | |||||
| Natural variant | 214 | 1 | E → K: dbSNP rs2288481. | VAR_021968 | |||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "Functional and structural diversity of the human Dickkopf gene family." Krupnik V.E., Sharp J.D., Jiang C., Robison K., Chickering T.W., Amaravadi L., Brown D.E., Guyot D., Mays G., Leiby K., Chang B., Duong T., Goodearl A.D.J., Gearing D.P., Sokol S.Y., McCarthy S.A. Gene 238:301-313(1999) [PubMed: 10570958] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA]. |
| [2] | "Genomic organization of the human and mouse Soggy." Tate G. Submitted (AUG-2000) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA]. |
| [3] | "The secreted protein discovery initiative (SPDI), a large-scale effort to identify novel human secreted and transmembrane proteins: a bioinformatics assessment." Clark H.F., Gurney A.L., Abaya E., Baker K., Baldwin D.T., Brush J., Chen J., Chow B., Chui C., Crowley C., Currell B., Deuel B., Dowd P., Eaton D., Foster J.S., Grimaldi C., Gu Q., Hass P.E. Gray A.M.Genome Res. 13:2265-2270(2003) [PubMed: 12975309] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. |
| [4] | "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed: 15489334] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Tissue: Testis. |
| [5] | "Global, in vivo, and site-specific phosphorylation dynamics in signaling networks." Olsen J.V., Blagoev B., Gnad F., Macek B., Kumar C., Mortensen P., Mann M. Cell 127:635-648(2006) [PubMed: 17081983] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-223 AND SER-226, MASS SPECTROMETRY. Tissue: Epithelium. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | AF177398 mRNA. Translation: AAF02678.1. AB047818 Genomic DNA. Translation: BAB12400.1. AY358922 mRNA. Translation: AAQ89281.1. BC030581 mRNA. Translation: AAH30581.1. |
| IPI | IPI00007271. |
| RefSeq | NP_055234.1. |
| UniGene | Hs.515855 |
3D structure databases | |
| ModBase | Search... |
Protein-protein interaction databases | |
| IntAct | Q9UK85. 3 interactions. |
| STRING | Q9UK85. |
Proteomic databases | |
| PRIDE | Q9UK85. |
Genome annotation databases | |
| Ensembl | ENST00000221498; ENSP00000221498; ENSG00000104901; Homo sapiens. [Genome view] |
| GeneID | 27120. |
| KEGG | hsa:27120. |
| UCSC | uc002pnk.1. human. |
Organism-specific databases | |
| CTD | 27120. |
| GeneCards | GC19P054559. |
| HGNC | HGNC:16528. DKKL1. |
| HPA | CAB025410. |
| MIM | 605418. gene. |
| PharmGKB | PA134974559. |
| GenAtlas | Search... |
Phylogenomic databases | |
| eggNOG | prNOG12953. |
| HOGENOM | HBG126913. |
| HOVERGEN | Q9UK85. |
| InParanoid | Q9UK85. |
| OMA | MDFRGLP. |
| OrthoDB | EOG9PCDC5. |
| PhylomeDB | Q9UK85. |
Gene expression databases | |
| ArrayExpress | Q9UK85. |
| Bgee | Q9UK85. |
| CleanEx | HS_DKKL1. |
| Genevestigator | Q9UK85. |
| GermOnline | ENSG00000104901. Homo sapiens. |
Family and domain databases | |
| ProtoNet | Search... |
Other Resources | |
| NextBio | 49804. |
| SOURCE | Search... |
Entry information
| Entry name | DKKL1_HUMAN | ||||||||
| Accession | Primary (citable) accession number: Q9UK85 | ||||||||
| Entry history |
| ||||||||
| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation project | HPI (Human Proteome Initiative) | ||||||||
| Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. | ||||||||
Relevant documents
| Human chromosome 19 Human chromosome 19: entries, gene names and cross-references to MIM |
| Human entries with polymorphisms or disease mutations List of human entries with polymorphisms or disease mutations |
| Human polymorphisms and disease mutations Index of human polymorphisms and disease mutations |
| MIM cross-references Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot |

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