Q9UJX4 (APC5_HUMAN) Reviewed, UniProtKB/Swiss-Prot
Last modified
May 1, 2013.
Version 113.
History...
Names·Attributes·General annotation·Ontologies·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Anaphase-promoting complex subunit 5 Short name=APC5 Alternative name(s): Cyclosome subunit 5 | ||||
| Gene names |
| ||||
| Organism | Homo sapiens (Human) [Reference proteome] | ||||
| Taxonomic identifier | 9606 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo![]() |
Protein attributes
| Sequence length | 755 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at protein level |
General annotation (Comments)
| Function | Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin ligase that controls progression through mitosis and the G1 phase of the cell cycle. The APC/C complex acts by mediating ubiquitination and subsequent degradation of target proteins: it mainly mediates the formation of 'Lys-11'-linked polyubiquitin chains and, to a lower extent, the formation of 'Lys-48'- and 'Lys-63'-linked polyubiquitin chains. Ref.7 |
| Pathway | |
| Subunit structure | The APC/C is composed of at least 12 subunits. Ref.1 |
| Sequence similarities | Belongs to the APC5 family. Contains 4 TPR repeats. |
Ontologies
Alternative products
| This entry describes 3 isoforms produced by alternative splicing. [Align] [Select] | ||||||
| Isoform 1 (identifier: Q9UJX4-1) This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry. | ||||||
| Isoform 2 (identifier: Q9UJX4-2) The sequence of this isoform differs from the canonical sequence as follows: 1-121: Missing. 122-131: TEPEVHKTSV → MLSPCLSSYF 318-340: QQAELALQEAIRIAQESNDHVCL → TSPPWEYSPLFNRELLLGRRQTS 341-755: Missing. | ||||||
| Note: No experimental confirmation available. | ||||||
| Isoform 3 (identifier: Q9UJX4-3) The sequence of this isoform differs from the canonical sequence as follows: 1-99: Missing. 375-387: Missing. | ||||||
| Note: No experimental confirmation available. |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 755 | 755 | Anaphase-promoting complex subunit 5 | PRO_0000064597 | |||||
Regions | |||||||||
| Repeat | 301 – 334 | 34 | TPR 1 | ||||||
| Repeat | 522 – 555 | 34 | TPR 2 | ||||||
| Repeat | 581 – 614 | 34 | TPR 3 | ||||||
| Repeat | 678 – 711 | 34 | TPR 4 | ||||||
Amino acid modifications | |||||||||
| Modified residue | 195 | 1 | Phosphoserine Ref.6 | ||||||
Natural variations | |||||||||
| Alternative sequence | 1 – 121 | 121 | Missing in isoform 2. | VSP_008466 | |||||
| Alternative sequence | 1 – 99 | 99 | Missing in isoform 3. | VSP_044878 | |||||
| Alternative sequence | 122 – 131 | 10 | TEPEVHKTSV → MLSPCLSSYF in isoform 2. | VSP_008467 | |||||
| Alternative sequence | 318 – 340 | 23 | QQAEL…DHVCL → TSPPWEYSPLFNRELLLGRR QTS in isoform 2. | VSP_008468 | |||||
| Alternative sequence | 341 – 755 | 415 | Missing in isoform 2. | VSP_008469 | |||||
| Alternative sequence | 375 – 387 | 13 | Missing in isoform 3. | VSP_044879 | |||||
| Natural variant | 617 | 1 | Q → H in a breast cancer sample; somatic mutation. Ref.11 | VAR_035793 | |||||
Experimental info | |||||||||
| Sequence conflict | 24 | 1 | F → L in AAF05753. Ref.1 | ||||||
Sequences
| ||||||||||||||||||||||||||||||
References
| « Hide 'large scale' references | |
| [1] | "Identification of a cullin homology region in a subunit of the anaphase-promoting complex." Yu H., Peters J.-M., King R.W., Page A.M., Hieter P., Kirschner M.W. Science 279:1219-1222(1998) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1), SUBUNIT. |
| [2] | "Complete sequencing and characterization of 21,243 full-length human cDNAs." Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S. Sugano S.Nat. Genet. 36:40-45(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 3). Tissue: Hepatoma. |
| [3] | "The full-ORF clone resource of the German cDNA consortium." Bechtel S., Rosenfelder H., Duda A., Schmidt C.P., Ernst U., Wellenreuther R., Mehrle A., Schuster C., Bahr A., Bloecker H., Heubner D., Hoerlein A., Michel G., Wedler H., Koehrer K., Ottenwaelder B., Poustka A., Wiemann S., Schupp I. BMC Genomics 8:399-399(2007) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 2). Tissue: Esophagus. |
| [4] | "The finished DNA sequence of human chromosome 12." Scherer S.E., Muzny D.M., Buhay C.J., Chen R., Cree A., Ding Y., Dugan-Rocha S., Gill R., Gunaratne P., Harris R.A., Hawes A.C., Hernandez J., Hodgson A.V., Hume J., Jackson A., Khan Z.M., Kovar-Smith C., Lewis L.R. Gibbs R.A.Nature 440:346-351(2006) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [5] | "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1). Tissue: Brain, Cervix and Lung. |
| [6] | "Mitotic regulation of the human anaphase-promoting complex by phosphorylation." Kraft C., Herzog F., Gieffers C., Mechtler K., Hagting A., Pines J., Peters J.-M. EMBO J. 22:6598-6609(2003) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION AT SER-195. |
| [7] | "Mechanism of ubiquitin-chain formation by the human anaphase-promoting complex." Jin L., Williamson A., Banerjee S., Philipp I., Rape M. Cell 133:653-665(2008) [PubMed] [Europe PMC] [Abstract] Cited for: FUNCTION OF THE APC/C. |
| [8] | "Quantitative phosphoproteomic analysis of T cell receptor signaling reveals system-wide modulation of protein-protein interactions." Mayya V., Lundgren D.H., Hwang S.-I., Rezaul K., Wu L., Eng J.K., Rodionov V., Han D.K. Sci. Signal. 2:RA46-RA46(2009) [PubMed] [Europe PMC] [Abstract] Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]. Tissue: Leukemic T-cell. |
| [9] | "Initial characterization of the human central proteome." Burkard T.R., Planyavsky M., Kaupe I., Breitwieser F.P., Buerckstuemmer T., Bennett K.L., Superti-Furga G., Colinge J. BMC Syst. Biol. 5:17-17(2011) [PubMed] [Europe PMC] [Abstract] Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]. |
| [10] | "Localization of the coactivator Cdh1 and the cullin subunit Apc2 in a cryo-electron microscopy model of vertebrate APC/C." Dube P., Herzog F., Gieffers C., Sander B., Riedel D., Mueller S.A., Engel A., Peters J.-M., Stark H. Mol. Cell 20:867-879(2005) [PubMed] [Europe PMC] [Abstract] Cited for: ELECTRON MICROSCOPY OF THE APC/C. |
| [11] | "The consensus coding sequences of human breast and colorectal cancers." Sjoeblom T., Jones S., Wood L.D., Parsons D.W., Lin J., Barber T.D., Mandelker D., Leary R.J., Ptak J., Silliman N., Szabo S., Buckhaults P., Farrell C., Meeh P., Markowitz S.D., Willis J., Dawson D., Willson J.K.V. Velculescu V.E.Science 314:268-274(2006) [PubMed] [Europe PMC] [Abstract] Cited for: VARIANT [LARGE SCALE ANALYSIS] HIS-617. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | AF191339 mRNA. Translation: AAF05753.1. AK025614 mRNA. No translation available. BX537687 mRNA. Translation: CAD97812.1. AC048337 Genomic DNA. No translation available. AC069209 Genomic DNA. No translation available. BC001081 mRNA. Translation: AAH01081.1. BC001950 mRNA. Translation: AAH01950.1. BC006301 mRNA. Translation: AAH06301.1. BC034243 mRNA. Translation: AAH34243.1. |
| IPI | IPI00008247. IPI00375602. IPI00788662. |
| RefSeq | NP_001131031.1. NM_001137559.1. NP_057321.2. NM_016237.4. |
| UniGene | Hs.7101. |
3D structure databases | |
| ProteinModelPortal | Q9UJX4. |
| ModBase | Search... |
Protein-protein interaction databases | |
| DIP | DIP-32945N. |
| IntAct | Q9UJX4. 26 interactions. |
| MINT | MINT-1391095. |
| STRING | 9606.ENSP00000261819. |
PTM databases | |
| PhosphoSite | Q9UJX4. |
Polymorphism databases | |
| DMDM | 37537861. |
Proteomic databases | |
| PaxDb | Q9UJX4. |
| PeptideAtlas | Q9UJX4. |
| PRIDE | Q9UJX4. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| Ensembl | ENST00000261819; ENSP00000261819; ENSG00000089053. ENST00000344395; ENSP00000343787; ENSG00000089053. ENST00000441917; ENSP00000415061; ENSG00000089053. ENST00000536366; ENSP00000445310; ENSG00000089053. |
| GeneID | 51433. |
| KEGG | hsa:51433. |
| UCSC | uc001uag.3. human. |
Organism-specific databases | |
| CTD | 51433. |
| GeneCards | GC12M121746. |
| HGNC | HGNC:15713. ANAPC5. |
| HPA | HPA039457. |
| MIM | 606948. gene. |
| neXtProt | NX_Q9UJX4. |
| PharmGKB | PA24788. |
| GenAtlas | Search... |
Phylogenomic databases | |
| eggNOG | NOG320252. |
| HOGENOM | HOG000033988. |
| HOVERGEN | HBG001285. |
| InParanoid | Q9UJX4. |
| KO | K03352. |
| OMA | LYWRSSC. |
| OrthoDB | EOG47M1X9. |
| PhylomeDB | Q9UJX4. |
Enzyme and pathway databases | |
| Reactome | REACT_115566. Cell Cycle. REACT_21300. Mitotic M-M/G1 phases. REACT_6850. Cdc20:Phospho-APC/C mediated degradation of Cyclin A. REACT_6900. Immune System. REACT_8017. APC-Cdc20 mediated degradation of Nek2A. |
| UniPathway | UPA00143. |
Gene expression databases | |
| ArrayExpress | Q9UJX4. |
| Bgee | Q9UJX4. |
| CleanEx | HS_ANAPC5. |
| Genevestigator | Q9UJX4. |
| GermOnline | ENSG00000089053. Homo sapiens. |
Family and domain databases | |
| Gene3D | 1.25.40.10. 4 hits. |
| InterPro | IPR026000. Apc5_TPR. IPR011990. TPR-like_helical. [Graphical view] |
| Pfam | PF12862. Apc5. 2 hits. [Graphical view] |
| PROSITE | PS50005. TPR. False negative. PS50293. TPR_REGION. False negative. [Graphical view] |
| ProtoNet | Search... |
Other | |
| ChiTaRS | ANAPC5. human. |
| GenomeRNAi | 51433. |
| NextBio | 55001. |
| SOURCE | Search... |
Entry information
| Entry name | APC5_HUMAN | ||||||||
| Accession | Primary (citable) accession number: Q9UJX4 Secondary accession number(s): E9PFB2, Q8N4H7, Q9BQD4 | ||||||||
| Entry history |
| ||||||||
| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Chordata Protein Annotation Program | ||||||||
| Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. | ||||||||
Relevant documents
| Human chromosome 12 Human chromosome 12: entries, gene names and cross-references to MIM |
| Human entries with polymorphisms or disease mutations List of human entries with polymorphisms or disease mutations |
| Human polymorphisms and disease mutations Index of human polymorphisms and disease mutations |
| MIM cross-references Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot |
| PATHWAY comments Index of metabolic and biosynthesis pathways |
| SIMILARITY comments Index of protein domains and families |

Clusters with
