Q9UIJ5 (ZDHC2_HUMAN) Reviewed, UniProtKB/Swiss-Prot
Last modified
January 25, 2012.
Version 80.
History...
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Palmitoyltransferase ZDHHC2 EC=2.3.1.- Alternative name(s): Reduced expression associated with metastasis protein Short name=Ream Reduced expression in cancer protein Short name=Rec Zinc finger DHHC domain-containing protein 2 Short name=DHHC-2 Zinc finger protein 372 | ||||
| Gene names |
| ||||
| Organism | Homo sapiens (Human) | ||||
| Taxonomic identifier | 9606 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo |
Protein attributes
| Sequence length | 367 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at transcript level |
General annotation (Comments)
| Function | Palmitoyltransferase specific for GAP43 and DLG4/PSD95 By similarity. |
| Catalytic activity | Palmitoyl-CoA + protein-cysteine = S-palmitoyl protein + CoA. |
| Subcellular location | Membrane; Multi-pass membrane protein Potential. |
| Tissue specificity | Ubiquitously expressed. Reduced expression in colorectal cancers with liver metastasis. Ref.1 |
| Domain | The DHHC domain is required for palmitoyltransferase activity By similarity. |
| Involvement in disease | Note=Mutations in ZDHHC2 are found in hepatocellular carcinoma and colorectal cancer. |
| Sequence similarities | Belongs to the DHHC palmitoyltransferase family. Contains 1 DHHC-type zinc finger. |
Ontologies
| Keywords | |
|---|---|
| Cellular component | Membrane |
| Coding sequence diversity | Polymorphism |
| Domain | Transmembrane Transmembrane helix Zinc-finger |
| Ligand | Metal-binding Zinc |
| Molecular function | Acyltransferase Transferase |
| Technical term | Complete proteome Reference proteome |
| Gene Ontology (GO) | |
| Cellular component | integral to membrane Inferred from electronic annotation. Source: UniProtKB-KW |
| Molecular function | zinc ion binding Inferred from electronic annotation. Source: InterPro |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 367 | 367 | Palmitoyltransferase ZDHHC2 | PRO_0000212859 | |||||
Regions | |||||||||
| Transmembrane | 17 – 37 | 21 | Helical; Potential | ||||||
| Transmembrane | 55 – 75 | 21 | Helical; Potential | ||||||
| Transmembrane | 171 – 191 | 21 | Helical; Potential | ||||||
| Transmembrane | 209 – 229 | 21 | Helical; Potential | ||||||
| Zinc finger | 127 – 177 | 51 | DHHC-type | ||||||
Natural variations | |||||||||
| Natural variant | 306 | 1 | S → F in a hepatocellular carcinoma sample; somatic mutation. Ref.1 | VAR_015229 | |||||
| Natural variant | 356 | 1 | M → I in a colorectal cancer sample; somatic mutation. Ref.1 | VAR_015230 | |||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "Isolation of a novel gene on 8p21.3-22 whose expression is reduced significantly in human colorectal cancers with liver metastasis." Oyama T., Miyoshi Y., Koyama K., Nakagawa H., Yamori T., Ito T., Matsuda H., Arakawa H., Nakamura Y. Genes Chromosomes Cancer 29:9-15(2000) [PubMed: 10918388] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA], TISSUE SPECIFICITY, VARIANTS PHE-306 AND ILE-356. |
| [2] | Mural R.J., Istrail S., Sutton G.G., Florea L., Halpern A.L., Mobarry C.M., Lippert R., Walenz B., Shatkay H., Dew I., Miller J.R., Flanigan M.J., Edwards N.J., Bolanos R., Fasulo D., Halldorsson B.V., Hannenhalli S., Turner R. Venter J.C.Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [3] | "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed: 15489334] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Tissue: Brain and Duodenum. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | AB023584 mRNA. Translation: BAA88923.1. CH471080 Genomic DNA. Translation: EAW63824.1. CH471080 Genomic DNA. Translation: EAW63825.1. BC039253 mRNA. Translation: AAH39253.1. BC050272 mRNA. Translation: AAH50272.1. |
| IPI | IPI00008896. |
| RefSeq | NP_057437.1. NM_016353.4. |
| UniGene | Hs.726197. |
3D structure databases | |
| ProteinModelPortal | Q9UIJ5. |
| ModBase | Search... |
Protein-protein interaction databases | |
| STRING | Q9UIJ5. |
Polymorphism databases | |
| DMDM | 28202111. |
Proteomic databases | |
| PRIDE | Q9UIJ5. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| Ensembl | ENST00000262096; ENSP00000262096; ENSG00000104219. |
| GeneID | 51201. |
| KEGG | hsa:51201. |
| UCSC | uc003wxe.1. human. |
Organism-specific databases | |
| CTD | 51201. |
| GeneCards | GC08P017058. |
| H-InvDB | HIX0007333. |
| HGNC | HGNC:18469. ZDHHC2. |
| neXtProt | NX_Q9UIJ5. |
| PharmGKB | PA38336. |
| GenAtlas | Search... |
Phylogenomic databases | |
| eggNOG | prNOG14768. |
| GeneTree | ENSGT00570000078748. |
| HOGENOM | HBG443608. |
| HOVERGEN | HBG055108. |
| InParanoid | Q9UIJ5. |
| OMA | SWTESST. |
| OrthoDB | EOG4GTKD9. |
| PhylomeDB | Q9UIJ5. |
Gene expression databases | |
| ArrayExpress | Q9UIJ5. |
| Bgee | Q9UIJ5. |
| CleanEx | HS_ZDHHC2. |
| Genevestigator | Q9UIJ5. |
| GermOnline | ENSG00000104219. Homo sapiens. |
Family and domain databases | |
| InterPro | IPR001594. Znf_DHHC_palmitoyltrfase. [Graphical view] |
| Pfam | PF01529. zf-DHHC. 1 hit. [Graphical view] |
| PROSITE | PS50216. ZF_DHHC. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Other | |
| NextBio | 54234. |
Entry information
| Entry name | ZDHC2_HUMAN | ||||||||
| Accession | Primary (citable) accession number: Q9UIJ5 Secondary accession number(s): D3DSP5 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Chordata Protein Annotation Program | ||||||||
| Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. | ||||||||
Relevant documents
| Human chromosome 8 Human chromosome 8: entries, gene names and cross-references to MIM |
| Human entries with polymorphisms or disease mutations List of human entries with polymorphisms or disease mutations |
| Human polymorphisms and disease mutations Index of human polymorphisms and disease mutations |
| SIMILARITY comments Index of protein domains and families |

Clusters with