Reviewed,
UniProtKB/Swiss-Prot Q9UG63 (ABCF2_HUMAN)
Last modified
November 24, 2009.
Version 86.
History...
Clusters with 100%,
90%,
50% identity |
Documents (3) |
Third-party data |
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Names and origin
| Protein names | Recommended name: ATP-binding cassette sub-family F member 2 Alternative name(s): Iron-inhibited ABC transporter 2 | ||||
| Gene names |
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| Organism | Homo sapiens (Human) [Complete proteome] | ||||
| Taxonomic identifier | 9606 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo |
Protein attributes
| Sequence length | 623 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is not processed. |
| Protein existence | Evidence at protein level. |
General annotation (Comments)
| Sequence similarities | Belongs to the ABC transporter superfamily. ABCF family. EF3 subfamily. Contains 2 ABC transporter domains. |
| Caution | Lacks transmembrane domains and is probably not involved in transport. |
Ontologies
| Keywords | |
|---|---|
| Domain | Repeat |
| Ligand | ATP-binding Nucleotide-binding |
| PTM | Acetylation Phosphoprotein |
| Technical term | Complete proteome |
| Gene Ontology (GO) | |
| Biological process | transport Traceable author statement. Source: ProtInc |
| Cellular component | ATP-binding cassette (ABC) transporter complex Traceable author statement. Source: ProtInc mitochondrial envelopeTraceable author statement. Source: ProtInc |
| Molecular function | ATP binding Traceable author statement. Source: ProtInc ATPase activityInferred from electronic annotation. Source: InterPro transporter activityTraceable author statement. Source: ProtInc |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 623 | 623 | ATP-binding cassette sub-family F member 2 | PRO_0000093323 | |||||
Regions | |||||||||
| Domain | 86 – 325 | 240 | ABC transporter 1 | ||||||
| Domain | 396 – 613 | 218 | ABC transporter 2 | ||||||
| Nucleotide binding | 118 – 125 | 8 | ATP 1 By similarity | ||||||
| Nucleotide binding | 430 – 437 | 8 | ATP 2 By similarity | ||||||
Amino acid modifications | |||||||||
| Modified residue | 304 | 1 | N6-acetyllysine Ref.7 | ||||||
| Modified residue | 349 | 1 | Phosphoserine Ref.5 | ||||||
Experimental info | |||||||||
| Sequence conflict | 39 | 1 | V → A in AAG13902. Ref.1 | ||||||
| Sequence conflict | 39 | 1 | V → A in AAG13903. Ref.1 | ||||||
| Sequence conflict | 74 | 1 | T → A in CAA06290. Ref.4 | ||||||
| Sequence conflict | 623 | 1 | V → VCTLTLASLPRP in CAB43392. Ref.2 | ||||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "cDNA cloning by amplification of circularized first strand cDNAs reveals non-IRE-regulated iron-responsive mRNAs." Ye Z., Connor J.R. Biochem. Biophys. Res. Commun. 275:223-227(2000) [PubMed: 10944468] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA]. |
| [2] | "The full-ORF clone resource of the German cDNA consortium." Bechtel S., Rosenfelder H., Duda A., Schmidt C.P., Ernst U., Wellenreuther R., Mehrle A., Schuster C., Bahr A., Bloecker H., Heubner D., Hoerlein A., Michel G., Wedler H., Koehrer K., Ottenwaelder B., Poustka A., Wiemann S., Schupp I. BMC Genomics 8:399-399(2007) [PubMed: 17974005] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Tissue: Uterus. |
| [3] | "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed: 15489334] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Tissue: Colon. |
| [4] | "Characterization of 16 novel human genes showing high similarity to yeast sequences." Stanchi F., Bertocco E., Toppo S., Dioguardi R., Simionati B., Cannata N., Zimbello R., Lanfranchi G., Valle G. Yeast 18:69-80(2001) [PubMed: 11124703] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] OF 74-623. Tissue: Lung. |
| [5] | "Global proteomic profiling of phosphopeptides using electron transfer dissociation tandem mass spectrometry." Molina H., Horn D.M., Tang N., Mathivanan S., Pandey A. Proc. Natl. Acad. Sci. U.S.A. 104:2199-2204(2007) [PubMed: 17287340] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-349, MASS SPECTROMETRY. |
| [6] | Colinge J., Superti-Furga G., Bennett K.L. Submitted (OCT-2008) to UniProtKB Cited for: IDENTIFICATION [LARGE SCALE ANALYSIS], MASS SPECTROMETRY. |
| [7] | "Lysine acetylation targets protein complexes and co-regulates major cellular functions." Choudhary C., Kumar C., Gnad F., Nielsen M.L., Rehman M., Walther T., Olsen J.V., Mann M. Science 325:834-840(2009) [PubMed: 19608861] [Abstract] Cited for: ACETYLATION [LARGE SCALE ANALYSIS] AT LYS-304, MASS SPECTROMETRY. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |
|---|---|
| AF261091 mRNA. Translation: AAG13902.1. AF261092 mRNA. Translation: AAG13903.1. AL050291 mRNA. Translation: CAB43392.1. BC001661 mRNA. Translation: AAH01661.1. AJ005016 mRNA. Translation: CAA06290.1. | |
| IPI | IPI00005045. |
| PIR | T08810. |
| RefSeq | NP_005683.2. NP_009120.1. |
| UniGene | Hs.654958 |
3D structure databases | |
| ModBase | Search... |
Protein-protein interaction databases | |
| STRING | Q9UG63. |
PTM databases | |
| PhosphoSite | Q9UG63. |
Proteomic databases | |
| PRIDE | Q9UG63. |
Genome annotation databases | |
| Ensembl | ENST00000222388; ENSP00000222388; ENSG00000033050; Homo sapiens. [Genome view] ENST00000287844; ENSP00000287844; ENSG00000033050; Homo sapiens. [Genome view] |
| GeneID | 10061. |
| KEGG | hsa:10061. |
| UCSC | uc003wjp.1. human. |
Organism-specific databases | |
| CTD | 10061. |
| GeneCards | GC07M150535. |
| H-InvDB | HIX0007228. |
| HGNC | HGNC:71. ABCF2. |
| HPA | CAB020682. HPA020091. HPA021815. |
| MIM | 612510. gene. |
| PharmGKB | PA24406. |
| GenAtlas | Search... |
Phylogenomic databases | |
| HOVERGEN | Q9UG63. |
| OrthoDB | EOG9J4029 |
Gene expression databases | |
| ArrayExpress | Q9UG63. |
| Bgee | Q9UG63. |
| CleanEx | HS_ABCF2. |
| Genevestigator | Q9UG63. |
| GermOnline | ENSG00000033050. Homo sapiens. |
Family and domain databases | |
| InterPro | IPR003439. ABC_transporter-like. IPR017871. ABC_transporter_CS. IPR003593. ATPase_AAA+_core. [Graphical view] |
| Pfam | PF00005. ABC_tran. 2 hits. [Graphical view] |
| SMART | SM00382. AAA. 2 hits. [Graphical view] |
| PROSITE | PS00211. ABC_TRANSPORTER_1. 1 hit. PS50893. ABC_TRANSPORTER_2. 2 hits. [Graphical view] |
| ProtoNet | Search... |
Other Resources | |
| NextBio | 38023. |
| PMAP-CutDB | Q9UG63. |
| SOURCE | Search... |
Entry information
| Entry name | ABCF2_HUMAN | ||||||||
| Accession | Primary (citable) accession number: Q9UG63 Secondary accession number(s): O60864, Q96TE8 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation project | HPI (Human Proteome Initiative) | ||||||||
| Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. | ||||||||
Relevant documents
| Human chromosome 7 Human chromosome 7: entries, gene names and cross-references to MIM |
| MIM cross-references Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot |
| SIMILARITY comments Index of protein domains and families |

Clusters with


