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Q9UBT7

- CTNL1_HUMAN

UniProt

Q9UBT7 - CTNL1_HUMAN

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Protein
Alpha-catulin
Gene
CTNNAL1
Organism
Homo sapiens (Human)
Status
Reviewed - Annotation score: 5 out of 5 - Experimental evidence at protein leveli

Functioni

May modulate the Rho pathway signaling by providing a scaffold for the Lbc Rho guanine nucleotide exchange factor (ARHGEF1).

GO - Molecular functioni

  1. structural molecule activity Source: InterPro

GO - Biological processi

  1. Rho protein signal transduction Source: MGI
  2. cell adhesion Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Recommended name:
Alpha-catulin
Alternative name(s):
Alpha-catenin-related protein
Short name:
ACRP
Catenin alpha-like protein 1
Gene namesi
Name:CTNNAL1
OrganismiHomo sapiens (Human)
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
ProteomesiUP000005640: Chromosome 9

Organism-specific databases

HGNCiHGNC:2512. CTNNAL1.

Subcellular locationi

Cytoplasmcytoskeleton. Cell membrane; Peripheral membrane protein 1 Publication

GO - Cellular componenti

  1. actin cytoskeleton Source: InterPro
  2. cytosol Source: MGI
  3. plasma membrane Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

Cell membrane, Cytoplasm, Cytoskeleton, Membrane

Pathology & Biotechi

Organism-specific databases

PharmGKBiPA27011.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 734734Alpha-catulin
PRO_0000064268Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei538 – 5381Phosphoserine1 Publication

Keywords - PTMi

Phosphoprotein

Proteomic databases

MaxQBiQ9UBT7.
PaxDbiQ9UBT7.
PRIDEiQ9UBT7.

PTM databases

PhosphoSiteiQ9UBT7.

Expressioni

Tissue specificityi

Widely expressed. Expressed at lower level in neural tissues and at the highest level in the adrenal gland.3 Publications

Inductioni

Down-regulated in cancer pancreatic cells undergoing differentiation and apoptosis.1 Publication

Gene expression databases

ArrayExpressiQ9UBT7.
BgeeiQ9UBT7.
CleanExiHS_CTNNAL1.
GenevestigatoriQ9UBT7.

Interactioni

Subunit structurei

Interacts with ARHGEF1.1 Publication

Protein-protein interaction databases

BioGridi114266. 5 interactions.
IntActiQ9UBT7. 5 interactions.
MINTiMINT-3002286.
STRINGi9606.ENSP00000320434.

Structurei

3D structure databases

ProteinModelPortaliQ9UBT7.
SMRiQ9UBT7. Positions 71-715.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiNOG304997.
HOVERGENiHBG051219.
InParanoidiQ9UBT7.
OMAiITCIHAE.
OrthoDBiEOG74BJRF.
PhylomeDBiQ9UBT7.
TreeFamiTF313686.

Family and domain databases

InterProiIPR001033. Alpha_catenin.
IPR006077. Vinculin/catenin.
[Graphical view]
PANTHERiPTHR18914. PTHR18914. 1 hit.
PfamiPF01044. Vinculin. 3 hits.
[Graphical view]
PRINTSiPR00805. ALPHACATENIN.
SUPFAMiSSF47220. SSF47220. 3 hits.

Sequences (3)i

Sequence statusi: Complete.

This entry describes 3 isoformsi produced by alternative splicing. Align

Isoform 1 (identifier: Q9UBT7-1) [UniParc]FASTAAdd to Basket

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide

MAASPGPAGV GGAGAVYGSG SSGFALDSGL EIKTRSVEQT LLPLVSQITT    50
LINHKDNTKK SDKTLQAIQR VGQAVNLAVG RFVKVGEAIA NENWDLKEEI 100
NIACIEAKQA GETIAALTDI TNLNHLESDG QITIFTDKTG VIKAARLLLS 150
SVTKVLLLAD RVVIKQIITS RNKVLATMER LEKVNSFQEF VQIFSQFGNE 200
MVEFAHLSGD RQNDLKDEKK KAKMAAARAV LEKCTMMLLT ASKTCLRHPN 250
CESAHKNKEG VFDRMKVALD KVIEIVTDCK PNGETDISSI SIFTGIKEFK 300
MNIEALRENL YFQSKENLSV TLEVILERME DFTDSAYTSH EHRERILELS 350
TQARMELQQL ISVWIQAQSK KTKSIAEELE LSILKISHSL NELKKELHST 400
ATQLAADLLK YHADHVVLKA LKLTGVEGNL EALAEYACKL SEQKEQLVET 450
CRLLRHISGT EPLEITCIHA EETFQVTGQQ IISAAETLTL HPSSKIAKEN 500
LDVFCEAWES QISDMSTLLR EINDVFEGRR GEKYGYLSLP KPMKNNANLK 550
SLKPDKPDSE EQAKIAKLGL KLGLLTSDAD CEIEKWEDQE NEIVQYGRNM 600
SSMAYSLYLF TRGEGPLKTS QDLIHQLEVF AAEGLKLTSS VQAFSKQLKD 650
DDKLMLLLEI NKLIPLCHQL QTVTKTSLQN KVFLKVDKCI TKTRSMMALL 700
VQLLSLCYKL LKKLQMENNG WVSVTNKDTM DSKT 734
Length:734
Mass (Da):81,896
Last modified:February 1, 2005 - v2
Checksum:i8756237C73AAEA31
GO
Isoform 2 (identifier: Q9UBT7-2) [UniParc]FASTAAdd to Basket

Also known as: Alpha2-catulin

The sequence of this isoform differs from the canonical sequence as follows:
     714-734: LQMENNGWVSVTNKDTMDSKT → SETRY

Show »
Length:718
Mass (Da):80,152
Checksum:i3FDAAE7A79BBB43E
GO
Isoform 3 (identifier: Q9UBT7-3) [UniParc]FASTAAdd to Basket

The sequence of this isoform differs from the canonical sequence as follows:
     397-480: Missing.

Show »
Length:650
Mass (Da):72,616
Checksum:iF71E1D06CBF61593
GO

Natural variant

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Natural varianti91 – 911N → T.1 Publication
Corresponds to variant rs28361109 [ dbSNP | Ensembl ].
VAR_020924
Natural varianti203 – 2031E → K.1 Publication
Corresponds to variant rs28361118 [ dbSNP | Ensembl ].
VAR_020925
Natural varianti424 – 4241T → S.
Corresponds to variant rs16913734 [ dbSNP | Ensembl ].
VAR_033845
Natural varianti527 – 5271E → Q.1 Publication
Corresponds to variant rs7021366 [ dbSNP | Ensembl ].
VAR_020926
Natural varianti555 – 5551D → E.
Corresponds to variant rs34922868 [ dbSNP | Ensembl ].
VAR_053370
Natural varianti593 – 5931I → N.1 Publication
Corresponds to variant rs28361167 [ dbSNP | Ensembl ].
VAR_020927
Natural varianti716 – 7161M → R.1 Publication
Corresponds to variant rs28361182 [ dbSNP | Ensembl ].
VAR_020928

Alternative sequence

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Alternative sequencei397 – 48084Missing in isoform 3.
VSP_012582Add
BLAST
Alternative sequencei714 – 73421LQMEN…MDSKT → SETRY in isoform 2.
VSP_012583Add
BLAST

Sequence conflict

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti504 – 5041F → S in BAD96950. 1 Publication

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AF030233 mRNA. Translation: AAC83460.1.
U97067 mRNA. Translation: AAC27693.1.
AF134888
, AF134871, AF134873, AF134874, AF134872, AF134875, AF134877, AF134879, AF134881, AF134887, AF134886, AF134885, AF134884, AF134883, AF134882, AF134880, AF134878, AF134876 Genomic DNA. Translation: AAF07820.1.
AF134888
, AF134871, AF134872, AF134874, AF134876, AF134878, AF134880, AF134882, AF134884, AF134887, AF134886, AF134885, AF134883, AF134881, AF134879, AF134877, AF134875, AF134873 Genomic DNA. Translation: AAF07821.1.
AF135021 mRNA. Translation: AAF07819.1.
AF006070 mRNA. Translation: AAC26011.1.
AF080071 mRNA. Translation: AAC69576.1.
AK223230 mRNA. Translation: BAD96950.1.
AY523969 Genomic DNA. Translation: AAR92479.1.
AB451283 mRNA. Translation: BAG70097.1.
AB451415 mRNA. Translation: BAG70229.1.
AL354797 Genomic DNA. Translation: CAI39471.1.
AL354797 Genomic DNA. Translation: CAI39472.1.
CH471105 Genomic DNA. Translation: EAW59036.1.
BC117208 mRNA. Translation: AAI17209.1.
BC117234 mRNA. Translation: AAI17235.1.
AL050016 mRNA. Translation: CAB43238.1.
CCDSiCCDS6775.1. [Q9UBT7-1]
CCDS69638.1. [Q9UBT7-2]
PIRiT08703.
RefSeqiNP_001273903.1. NM_001286974.1. [Q9UBT7-2]
NP_003789.1. NM_003798.3. [Q9UBT7-1]
UniGeneiHs.58488.

Genome annotation databases

EnsembliENST00000325551; ENSP00000320434; ENSG00000119326. [Q9UBT7-1]
ENST00000325580; ENSP00000323351; ENSG00000119326. [Q9UBT7-3]
ENST00000374595; ENSP00000363723; ENSG00000119326. [Q9UBT7-2]
GeneIDi8727.
KEGGihsa:8727.
UCSCiuc004bdo.1. human. [Q9UBT7-1]
uc004bdp.1. human. [Q9UBT7-2]
uc010mts.1. human. [Q9UBT7-3]

Polymorphism databases

DMDMi62901512.

Keywords - Coding sequence diversityi

Alternative splicing, Polymorphism

Cross-referencesi

Web resourcesi

NIEHS-SNPs

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AF030233 mRNA. Translation: AAC83460.1 .
U97067 mRNA. Translation: AAC27693.1 .
AF134888
, AF134871 , AF134873 , AF134874 , AF134872 , AF134875 , AF134877 , AF134879 , AF134881 , AF134887 , AF134886 , AF134885 , AF134884 , AF134883 , AF134882 , AF134880 , AF134878 , AF134876 Genomic DNA. Translation: AAF07820.1 .
AF134888
, AF134871 , AF134872 , AF134874 , AF134876 , AF134878 , AF134880 , AF134882 , AF134884 , AF134887 , AF134886 , AF134885 , AF134883 , AF134881 , AF134879 , AF134877 , AF134875 , AF134873 Genomic DNA. Translation: AAF07821.1 .
AF135021 mRNA. Translation: AAF07819.1 .
AF006070 mRNA. Translation: AAC26011.1 .
AF080071 mRNA. Translation: AAC69576.1 .
AK223230 mRNA. Translation: BAD96950.1 .
AY523969 Genomic DNA. Translation: AAR92479.1 .
AB451283 mRNA. Translation: BAG70097.1 .
AB451415 mRNA. Translation: BAG70229.1 .
AL354797 Genomic DNA. Translation: CAI39471.1 .
AL354797 Genomic DNA. Translation: CAI39472.1 .
CH471105 Genomic DNA. Translation: EAW59036.1 .
BC117208 mRNA. Translation: AAI17209.1 .
BC117234 mRNA. Translation: AAI17235.1 .
AL050016 mRNA. Translation: CAB43238.1 .
CCDSi CCDS6775.1. [Q9UBT7-1 ]
CCDS69638.1. [Q9UBT7-2 ]
PIRi T08703.
RefSeqi NP_001273903.1. NM_001286974.1. [Q9UBT7-2 ]
NP_003789.1. NM_003798.3. [Q9UBT7-1 ]
UniGenei Hs.58488.

3D structure databases

ProteinModelPortali Q9UBT7.
SMRi Q9UBT7. Positions 71-715.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

BioGridi 114266. 5 interactions.
IntActi Q9UBT7. 5 interactions.
MINTi MINT-3002286.
STRINGi 9606.ENSP00000320434.

PTM databases

PhosphoSitei Q9UBT7.

Polymorphism databases

DMDMi 62901512.

Proteomic databases

MaxQBi Q9UBT7.
PaxDbi Q9UBT7.
PRIDEi Q9UBT7.

Protocols and materials databases

DNASUi 8727.
Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENST00000325551 ; ENSP00000320434 ; ENSG00000119326 . [Q9UBT7-1 ]
ENST00000325580 ; ENSP00000323351 ; ENSG00000119326 . [Q9UBT7-3 ]
ENST00000374595 ; ENSP00000363723 ; ENSG00000119326 . [Q9UBT7-2 ]
GeneIDi 8727.
KEGGi hsa:8727.
UCSCi uc004bdo.1. human. [Q9UBT7-1 ]
uc004bdp.1. human. [Q9UBT7-2 ]
uc010mts.1. human. [Q9UBT7-3 ]

Organism-specific databases

CTDi 8727.
GeneCardsi GC09M111704.
HGNCi HGNC:2512. CTNNAL1.
MIMi 604785. gene.
neXtProti NX_Q9UBT7.
PharmGKBi PA27011.
GenAtlasi Search...

Phylogenomic databases

eggNOGi NOG304997.
HOVERGENi HBG051219.
InParanoidi Q9UBT7.
OMAi ITCIHAE.
OrthoDBi EOG74BJRF.
PhylomeDBi Q9UBT7.
TreeFami TF313686.

Miscellaneous databases

ChiTaRSi CTNNAL1. human.
GeneWikii CTNNAL1.
GenomeRNAii 8727.
NextBioi 32739.
PROi Q9UBT7.
SOURCEi Search...

Gene expression databases

ArrayExpressi Q9UBT7.
Bgeei Q9UBT7.
CleanExi HS_CTNNAL1.
Genevestigatori Q9UBT7.

Family and domain databases

InterProi IPR001033. Alpha_catenin.
IPR006077. Vinculin/catenin.
[Graphical view ]
PANTHERi PTHR18914. PTHR18914. 1 hit.
Pfami PF01044. Vinculin. 3 hits.
[Graphical view ]
PRINTSi PR00805. ALPHACATENIN.
SUPFAMi SSF47220. SSF47220. 3 hits.
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Identification and chromosomal localization of CTNNAL1, a novel protein homologous to alpha-catenin."
    Zhang J.-S., Nelson M., Wang L., Liu W., Qian C.-P., Shridhar V., Urrutia R., Smith D.I.
    Genomics 54:149-154(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1), TISSUE SPECIFICITY, INDUCTION.
    Tissue: Pancreatic cancer.
  2. "Human alpha-catulin, a novel alpha-catenin-like molecule with conserved genomic structure, but deviating alternative splicing."
    Janssens B., Staes K., van Roy F.M.
    Biochim. Biophys. Acta 1447:341-347(1999) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA / MRNA] (ISOFORMS 1 AND 2), TISSUE SPECIFICITY.
  3. Kishi M., Nagafuchi A., Tsukita S.
    Submitted (MAY-1997) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1).
  4. "Isolation of a novel alpha-catenin-like gene from the familial dysautonomia candidate region on 9q31."
    Slaugenhaupt S.A., Liebert C.B., Leyne M., Mull J., Gill S., Chadwick B.P., Maayan C., Axelrod F.B., Blumenfeld A., Gusella J.F.
    Submitted (JUL-1998) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1).
  5. Suzuki Y., Sugano S., Totoki Y., Toyoda A., Takeda T., Sakaki Y., Tanaka A., Yokoyama S.
    Submitted (APR-2005) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1).
    Tissue: Gastric mucosa.
  6. NIEHS SNPs program
    Submitted (JAN-2004) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA], VARIANTS THR-91; LYS-203; GLN-527; ASN-593 AND ARG-716.
  7. "Human protein factory for converting the transcriptome into an in vitro-expressed proteome."
    Goshima N., Kawamura Y., Fukumoto A., Miura A., Honma R., Satoh R., Wakamatsu A., Yamamoto J., Kimura K., Nishikawa T., Andoh T., Iida Y., Ishikawa K., Ito E., Kagawa N., Kaminaga C., Kanehori K., Kawakami B.
    , Kenmochi K., Kimura R., Kobayashi M., Kuroita T., Kuwayama H., Maruyama Y., Matsuo K., Minami K., Mitsubori M., Mori M., Morishita R., Murase A., Nishikawa A., Nishikawa S., Okamoto T., Sakagami N., Sakamoto Y., Sasaki Y., Seki T., Sono S., Sugiyama A., Sumiya T., Takayama T., Takayama Y., Takeda H., Togashi T., Yahata K., Yamada H., Yanagisawa Y., Endo Y., Imamoto F., Kisu Y., Tanaka S., Isogai T., Imai J., Watanabe S., Nomura N.
    Nat. Methods 5:1011-1017(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1).
  8. "DNA sequence and analysis of human chromosome 9."
    Humphray S.J., Oliver K., Hunt A.R., Plumb R.W., Loveland J.E., Howe K.L., Andrews T.D., Searle S., Hunt S.E., Scott C.E., Jones M.C., Ainscough R., Almeida J.P., Ambrose K.D., Ashwell R.I.S., Babbage A.K., Babbage S., Bagguley C.L.
    , Bailey J., Banerjee R., Barker D.J., Barlow K.F., Bates K., Beasley H., Beasley O., Bird C.P., Bray-Allen S., Brown A.J., Brown J.Y., Burford D., Burrill W., Burton J., Carder C., Carter N.P., Chapman J.C., Chen Y., Clarke G., Clark S.Y., Clee C.M., Clegg S., Collier R.E., Corby N., Crosier M., Cummings A.T., Davies J., Dhami P., Dunn M., Dutta I., Dyer L.W., Earthrowl M.E., Faulkner L., Fleming C.J., Frankish A., Frankland J.A., French L., Fricker D.G., Garner P., Garnett J., Ghori J., Gilbert J.G.R., Glison C., Grafham D.V., Gribble S., Griffiths C., Griffiths-Jones S., Grocock R., Guy J., Hall R.E., Hammond S., Harley J.L., Harrison E.S.I., Hart E.A., Heath P.D., Henderson C.D., Hopkins B.L., Howard P.J., Howden P.J., Huckle E., Johnson C., Johnson D., Joy A.A., Kay M., Keenan S., Kershaw J.K., Kimberley A.M., King A., Knights A., Laird G.K., Langford C., Lawlor S., Leongamornlert D.A., Leversha M., Lloyd C., Lloyd D.M., Lovell J., Martin S., Mashreghi-Mohammadi M., Matthews L., McLaren S., McLay K.E., McMurray A., Milne S., Nickerson T., Nisbett J., Nordsiek G., Pearce A.V., Peck A.I., Porter K.M., Pandian R., Pelan S., Phillimore B., Povey S., Ramsey Y., Rand V., Scharfe M., Sehra H.K., Shownkeen R., Sims S.K., Skuce C.D., Smith M., Steward C.A., Swarbreck D., Sycamore N., Tester J., Thorpe A., Tracey A., Tromans A., Thomas D.W., Wall M., Wallis J.M., West A.P., Whitehead S.L., Willey D.L., Williams S.A., Wilming L., Wray P.W., Young L., Ashurst J.L., Coulson A., Blocker H., Durbin R.M., Sulston J.E., Hubbard T., Jackson M.J., Bentley D.R., Beck S., Rogers J., Dunham I.
    Nature 429:369-374(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  9. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  10. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1).
    Tissue: Brain.
  11. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 296-734 (ISOFORM 3).
    Tissue: Brain.
  12. "Association of Lbc Rho guanine nucleotide exchange factor with alpha-catenin-related protein, alpha-catulin/CTNNAL1, supports serum response factor activation."
    Park B., Nguyen N.T., Dutt P., Merdek K.D., Bashar M., Sterpetti P., Tosolini A., Testa J.R., Toksoz D.
    J. Biol. Chem. 277:45361-45370(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: TISSUE SPECIFICITY, SUBCELLULAR LOCATION, INTERACTION WITH ARHGEF1.
  13. Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-538, IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
    Tissue: Cervix carcinoma.

Entry informationi

Entry nameiCTNL1_HUMAN
AccessioniPrimary (citable) accession number: Q9UBT7
Secondary accession number(s): B5BU47
, O76084, Q53FQ2, Q5JTQ7, Q5JTQ8, Q9Y401
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 1, 2005
Last sequence update: February 1, 2005
Last modified: July 9, 2014
This is version 97 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Human chromosome 9
    Human chromosome 9: entries, gene names and cross-references to MIM
  2. Human entries with polymorphisms or disease mutations
    List of human entries with polymorphisms or disease mutations
  3. Human polymorphisms and disease mutations
    Index of human polymorphisms and disease mutations
  4. MIM cross-references
    Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot
  5. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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