Q9UBP0 (SPAST_HUMAN) Reviewed, UniProtKB/Swiss-Prot
Last modified
January 25, 2012.
Version 110.
History...
Names·Attributes·General annotation·Ontologies·Alt products·Sequence annotation·Sequences·References·Web links·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Alt products·Sequence annotation·Sequences·References·Web links·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Spastin EC=3.6.4.3 Alternative name(s): Spastic paraplegia 4 protein | ||||
| Gene names |
| ||||
| Organism | Homo sapiens (Human) | ||||
| Taxonomic identifier | 9606 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo |
Protein attributes
| Sequence length | 616 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at protein level |
General annotation (Comments)
| Function | ATP-dependent microtubule severing protein. Microtubule severing may promote reorganization of cellular microtubule arrays and the release of microtubules from the centrosome following nucleation. Required for membrane traffic from the endoplasmic reticulum (ER) to the Golgi and for completion of the abscission stage of cytokinesis. May also play a role in axon growth and the formation of axonal branches. Ref.5 Ref.6 Ref.11 Ref.12 Ref.18 Ref.23 |
| Catalytic activity | ATP + H2O = ADP + phosphate. Ref.11 Ref.12 Ref.17 Ref.18 Ref.20 |
| Subunit structure | Homohexamer. Binding to ATP stabilizes the homohexameric form. Binds to microtubules at least in part via the alpha-tubulin and beta-tubulin tails. The hexamer may adopt a ring conformation through which microtubules pass prior to being severed. Does not interact strongly with tubulin heterodimers. Interacts (via MIT domain) with CHMP1B; the interaction is direct. Interacts with ATL1, RTN1, SSNA1 and ZFYVE27. Ref.8 Ref.10 Ref.11 Ref.14 Ref.15 Ref.16 Ref.17 Ref.18 Ref.20 Ref.24 |
| Subcellular location | Membrane; Single-pass membrane protein Potential. Cytoplasm › cytoskeleton › centrosome. Cytoplasm › cytoskeleton. Cytoplasm › perinuclear region. Endoplasmic reticulum. Endosome. Nucleus. Cytoplasm › cytoskeleton › spindle. Note: Localization to the centrosome is independent of microtubules. Localizes to the midbody of dividing cells, and this requires CHMP1B. Enriched in the distal axons and branches of postmitotic neurons. Isoform 3 is the main endosomal form. Ref.5 Ref.7 Ref.8 Ref.9 Ref.10 Ref.11 Ref.12 Ref.13 Ref.15 Ref.16 Ref.17 Ref.18 Ref.20 Ref.23 Ref.24 |
| Tissue specificity | Expressed in brain, heart, kidney, liver, lung, pancreas, placenta and skeletal muscle. The short isoforms may predominate in brain and spinal cord. Ref.1 |
| Developmental stage | Expressed in fetal brain, heart, kidney, liver, lung, skeletal muscle, spleen and thymus. Ref.1 |
| Involvement in disease | Defects in SPAST are the cause of spastic paraplegia autosomal dominant type 4 (SPG4) [MIM:182601]. Spastic paraplegia is a neurodegenerative disorder characterized by a slow, gradual, progressive weakness and spasticity of the lower limbs. Rate of progression and the severity of symptoms are quite variable. Initial symptoms may include difficulty with balance, weakness and stiffness in the legs, muscle spasms, and dragging the toes when walking. In some forms of the disorder, bladder symptoms (such as incontinence) may appear, or the weakness and stiffness may spread to other parts of the body. SPG4 is the most common form of autosomal dominant spastic paraplegias. Ref.1 Ref.5 Ref.11 Ref.13 Ref.15 Ref.18 Ref.23 Ref.25 Ref.26 Ref.27 Ref.28 Ref.29 Ref.30 Ref.31 Ref.32 Ref.33 Ref.34 Ref.35 Ref.36 Ref.37 Ref.38 Ref.39 Ref.40 Ref.41 Ref.42 Ref.43 Ref.44 Ref.45 Ref.46 |
| Sequence similarities | Belongs to the AAA ATPase family. Spastin subfamily. Contains 1 MIT domain. |
| Biophysicochemical properties | Kinetic parameters: Kinetic parameters shown are for full length enzyme. KM=0.45 mM for ATP Ref.11 Ref.18 Vmax=1.2 nmol/min/µg enzyme |
Ontologies
Alternative products
| This entry describes 4 isoforms produced by alternative promoter usage, alternative splicing and alternative initiation. [Align] [Select] Note: Alternative promoter usage of a cryptic promoter in exon 1 can direct the synthesis of N-terminally truncated isoforms, which may also arise from alternative initiation. | ||||||
| Isoform 1 (identifier: Q9UBP0-1) Also known as: Long; Long variant 1; This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry. | ||||||
| Isoform 2 (identifier: Q9UBP0-2) Also known as: Long variant 2; The sequence of this isoform differs from the canonical sequence as follows: 197-228: Missing. | ||||||
| Isoform 3 (identifier: Q9UBP0-3) Also known as: Short; Short variant 1; The sequence of this isoform differs from the canonical sequence as follows: 1-86: Missing. | ||||||
| Note: Produced by alternative promoter usage. May also be produced by alternative initiation at Met-87 of isoform 1. Major isoform. | ||||||
| Isoform 4 (identifier: Q9UBP0-4) Also known as: Short variant 2; The sequence of this isoform differs from the canonical sequence as follows: 1-86: Missing. 197-228: Missing. | ||||||
| Note: Produced by alternative promoter usage and alternative splicing. May also be produced by alternative initiation at Met-87 of isoform 2. |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||||||||||||
Molecule processing | |||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 616 | 616 | Spastin | PRO_0000084763 | |||||||||||||||
Regions | |||||||||||||||||||
| Transmembrane | 57 – 77 | 21 | Helical; Potential | ||||||||||||||||
| Domain | 119 – 195 | 77 | MIT | ||||||||||||||||
| Nucleotide binding | 382 – 389 | 8 | ATP Probable | ||||||||||||||||
| Region | 1 – 300 | 300 | Required for interaction with RTN1 | ||||||||||||||||
| Region | 1 – 194 | 194 | Required for midbody localization | ||||||||||||||||
| Region | 1 – 80 | 80 | Required for interaction with ATL1 | ||||||||||||||||
| Region | 1 – 50 | 50 | Required for nuclear localization | ||||||||||||||||
| Region | 50 – 87 | 38 | Required for interaction with SSNA1 and microtubules | ||||||||||||||||
| Region | 112 – 196 | 85 | Sufficient for interaction with CHMP1B | ||||||||||||||||
| Region | 114 – 200 | 87 | Required for interaction with microtubules | ||||||||||||||||
| Region | 227 – 328 | 102 | Sufficient for interaction with microtubules | ||||||||||||||||
| Region | 228 – 616 | 389 | Sufficient for microtubule severing | ||||||||||||||||
| Region | 270 – 328 | 59 | Required for interaction with microtubules and microtubule severing | ||||||||||||||||
| Motif | 4 – 11 | 8 | Nuclear localization signal Ref.7 | ||||||||||||||||
| Motif | 59 – 67 | 9 | Nuclear export signal | ||||||||||||||||
| Motif | 309 – 312 | 4 | Nuclear localization signal Ref.7 | ||||||||||||||||
Amino acid modifications | |||||||||||||||||||
| Modified residue | 268 | 1 | Phosphoserine Ref.21 Ref.22 | ||||||||||||||||
| Modified residue | 303 | 1 | Phosphothreonine Ref.21 | ||||||||||||||||
| Modified residue | 306 | 1 | Phosphothreonine Ref.21 | ||||||||||||||||
Natural variations | |||||||||||||||||||
| Alternative sequence | 1 – 86 | 86 | Missing in isoform 3 and isoform 4. | VSP_036650 | |||||||||||||||
| Alternative sequence | 197 – 228 | 32 | Missing in isoform 2 and isoform 4. | VSP_000024 | |||||||||||||||
| Natural variant | 44 | 1 | S → L Rare polymorphism which modifies the phenotype of SPG4 disease; may decrease the activity of the alternative promoter which directs the synthesis of isoform 3 and isoform 4. Ref.19 Ref.27 Ref.41 Ref.44 | VAR_010194 | |||||||||||||||
| Natural variant | 45 | 1 | P → Q Rare polymorphism which modifies the phenotype of SPG4 disease. Ref.41 | VAR_027205 | |||||||||||||||
| Natural variant | 195 | 1 | L → V in SPG4. Ref.45 | VAR_026758 | |||||||||||||||
| Natural variant | 344 | 1 | I → K in SPG4; abrogates ATPase activity and promotes microtubule binding. Ref.11 Ref.36 | VAR_019448 | |||||||||||||||
| Natural variant | 347 | 1 | Q → K in SPG4; promotes microtubule binding. Ref.11 Ref.33 | VAR_027206 | |||||||||||||||
| Natural variant | 361 | 1 | P → L in SPG4. Ref.44 | VAR_027207 | |||||||||||||||
| Natural variant | 362 | 1 | S → C in SPG4. Ref.1 Ref.26 | VAR_010195 | |||||||||||||||
| Natural variant | 370 | 1 | G → R in SPG4; promotes microtubule binding and the formation of thick microtubule bundles. Ref.5 Ref.26 | VAR_027208 | |||||||||||||||
| Natural variant | 378 | 1 | L → Q in SPG4. Ref.39 | VAR_019439 | |||||||||||||||
| Natural variant | 381 | 1 | F → C in SPG4; promotes microtubule binding and the formation of thick microtubule bundles. Ref.5 Ref.26 | VAR_027209 | |||||||||||||||
| Natural variant | 386 | 1 | N → K in SPG4; abrogates ATPase activity, promotes microtubule binding and the formation of thick microtubule bundles. Ref.5 Ref.11 Ref.26 | VAR_027210 | |||||||||||||||
| Natural variant | 386 | 1 | N → S in SPG4. Ref.40 | VAR_019440 | |||||||||||||||
| Natural variant | 388 | 1 | K → R in SPG4; abrogates ATPase activity, promotes microtubule binding and the formation of thick microtubule bundles and impairs traffic from the ER to Golgi. Ref.5 Ref.11 Ref.13 Ref.15 Ref.23 Ref.26 Ref.33 | VAR_027211 | |||||||||||||||
| Natural variant | 390 | 1 | M → V in SPG4. Ref.39 | VAR_019441 | |||||||||||||||
| Natural variant | 399 | 1 | S → L in SPG4. Ref.31 | VAR_027212 | |||||||||||||||
| Natural variant | 404 | 1 | Missing in SPG4. | VAR_019449 | |||||||||||||||
| Natural variant | 406 | 1 | I → V in SPG4. Ref.45 | VAR_026759 | |||||||||||||||
| Natural variant | 407 | 1 | S → R in SPG4. Ref.32 | VAR_019450 | |||||||||||||||
| Natural variant | 423 | 1 | V → L in a breast cancer sample; somatic mutation. Ref.47 | VAR_035902 | |||||||||||||||
| Natural variant | 424 | 1 | R → G in SPG4. Ref.27 | VAR_010196 | |||||||||||||||
| Natural variant | 426 | 1 | L → V in SPG4; promotes microtubule binding and the formation of thick microtubule bundles. Ref.5 Ref.26 Ref.31 | VAR_027213 | |||||||||||||||
| Natural variant | 435 | 1 | P → L in SPG4. Ref.46 | VAR_027214 | |||||||||||||||
| Natural variant | 436 | 1 | S → F in SPG4. Ref.28 | VAR_027215 | |||||||||||||||
| Natural variant | 441 | 1 | D → G in SPG4. Ref.25 | VAR_027216 | |||||||||||||||
| Natural variant | 448 | 1 | C → Y in SPG4; abrogates binding to the tail of beta-3-tubulin, abolishes microtubule severing and promotes the formation of thick microtubule bundles. Ref.1 Ref.5 Ref.18 Ref.26 | VAR_010197 | |||||||||||||||
| Natural variant | 459 | 1 | R → G in SPG4. Ref.42 | VAR_027217 | |||||||||||||||
| Natural variant | 460 | 1 | R → C in SPG4; promotes microtubule binding and the formation of thick microtubule bundles. Ref.42 | VAR_027218 | |||||||||||||||
| Natural variant | 460 | 1 | R → L in SPG4. Ref.5 Ref.26 | VAR_027219 | |||||||||||||||
| Natural variant | 470 | 1 | D → V in SPG4. Ref.41 Corresponds to variant rs28939368 [ dbSNP | Ensembl ]. | VAR_027220 | |||||||||||||||
| Natural variant | 485 | 1 | A → V in SPG4. Ref.30 | VAR_027221 | |||||||||||||||
| Natural variant | 489 | 1 | P → L in SPG4. Ref.31 | VAR_027222 | |||||||||||||||
| Natural variant | 493 | 1 | D → G in SPG4. Ref.45 | VAR_026760 | |||||||||||||||
| Natural variant | 499 | 1 | R → C in SPG4; abrogates ATPase activity, promotes microtubule binding and the formation of thick microtubule bundles. Ref.1 Ref.5 Ref.11 Ref.26 Ref.29 Ref.33 | VAR_010198 | |||||||||||||||
| Natural variant | 499 | 1 | R → H in SPG4. Ref.45 | VAR_026761 | |||||||||||||||
| Natural variant | 503 | 1 | R → L in SPG4. Ref.37 | VAR_019442 | |||||||||||||||
| Natural variant | 503 | 1 | R → W in SPG4. Ref.45 | VAR_026762 | |||||||||||||||
| Natural variant | 512 | 1 | E → D in SPG4. Ref.34 | VAR_027223 | |||||||||||||||
| Natural variant | 515 | 1 | Missing in SPG4. | VAR_019443 | |||||||||||||||
| Natural variant | 534 | 1 | L → P in SPG4. Ref.38 | VAR_019444 | |||||||||||||||
| Natural variant | 551 | 1 | A → Y in SPG4; requires 2 nucleotide substitutions. Ref.32 | VAR_019451 | |||||||||||||||
| Natural variant | 555 | 1 | D → N in SPG4. Ref.26 | VAR_027224 | |||||||||||||||
| Natural variant | 556 | 1 | A → V in SPG4; promotes microtubule binding and the formation of thick microtubule bundles. Ref.5 Ref.26 | VAR_027225 | |||||||||||||||
| Natural variant | 559 | 1 | G → D in SPG4. Ref.28 Ref.31 | VAR_027226 | |||||||||||||||
| Natural variant | 562 | 1 | R → G in SPG4. Ref.29 Ref.41 | VAR_027227 | |||||||||||||||
| Natural variant | 562 | 1 | R → Q in SPG4. Ref.31 | VAR_027228 | |||||||||||||||
| Natural variant | 584 | 1 | D → H in SPG4. Ref.27 | VAR_010199 | |||||||||||||||
| Natural variant | 607 | 1 | W → C in SPG4. Ref.45 | VAR_026763 | |||||||||||||||
| Natural variant | 614 | 1 | T → I in SPG4; variant form with congenital arachnoid cysts. Ref.43 | VAR_019445 | |||||||||||||||
| Natural variant | 615 | 1 | T → I in SPG4. Ref.32 | VAR_019452 | |||||||||||||||
Experimental info | |||||||||||||||||||
| Mutagenesis | 1 | 1 | M → V: Cytoplasmic and nuclear. Ref.9 | ||||||||||||||||
| Mutagenesis | 87 | 1 | M → V: Exclusively cytoplasmic. Ref.9 | ||||||||||||||||
| Mutagenesis | 120 | 1 | H → D: Impairs binding to CHMP1B. Impairs midbody localization; when associated with D-124. Ref.24 | ||||||||||||||||
| Mutagenesis | 124 | 1 | F → A: Impairs binding to CHMP1B. Ref.24 | ||||||||||||||||
| Mutagenesis | 124 | 1 | F → D: Impairs binding to CHMP1B. Impairs midbody localization; when associated with D-120. Ref.24 | ||||||||||||||||
| Mutagenesis | 388 | 1 | K → A: Abrogates ATPase activity and abolishes microtubule severing. Ref.11 | ||||||||||||||||
| Mutagenesis | 415 | 1 | Y → A: Abrogates binding to the tail of alpha-tubulin and beta-3-tubulin, impairs ATPase activity and abolishes microtubule severing. Ref.18 | ||||||||||||||||
| Mutagenesis | 442 | 1 | E → Q: Abrogates ATP hydrolysis, abolishes microtubule severing, stabilizes the homohexameric form, and promotes microtubule binding and redistribution from the endosome to microtubules. Ref.11 Ref.17 Ref.18 Ref.20 | ||||||||||||||||
| Mutagenesis | 451 | 1 | R → G: Abrogates binding to the tail of alpha-tubulin and beta-3-tubulin, impairs ATPase activity and abolishes microtubule severing. Ref.18 | ||||||||||||||||
| Mutagenesis | 457 | 1 | A → E: Abrogates binding to the tail of alpha-tubulin and beta-3-tubulin and abolishes microtubule severing. Ref.18 | ||||||||||||||||
Secondary structure | |||||||||||||||||||
Helix Strand Turn | |||||||||||||||||||
| Helix | 112 – 136 | 25 | |||||||||||||||||
| Helix | 142 – 144 | 3 | |||||||||||||||||
| Helix | 146 – 150 | 5 | |||||||||||||||||
| Helix | 154 – 157 | 4 | |||||||||||||||||
| Helix | 170 – 196 | 27 | |||||||||||||||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "Spastin, a new AAA protein, is altered in the most frequent form of autosomal dominant spastic paraplegia." Hazan J., Fonknechten N., Mavel D., Paternotte C., Samson D., Artiguenave F., Davoine C.-S., Cruaud C., Durr A., Wincker P., Brottier P., Cattolico L., Barbe V., Burgunder J.-M., Prud'homme J.-F., Brice A., Fontaine B., Heilig R., Weissenbach J. Nat. Genet. 23:296-303(1999) [PubMed: 10610178] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA / MRNA] (ISOFORM 1), TISSUE SPECIFICITY, DEVELOPMENTAL STAGE, VARIANTS SPG4 CYS-362; TYR-448 AND CYS-499. |
| [2] | "Prediction of the coding sequences of unidentified human genes. XIV. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro." Kikuno R., Nagase T., Ishikawa K., Hirosawa M., Miyajima N., Tanaka A., Kotani H., Nomura N., Ohara O. DNA Res. 6:197-205(1999) [PubMed: 10470851] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 2). Tissue: Brain. |
| [3] | Mural R.J., Istrail S., Sutton G.G., Florea L., Halpern A.L., Mobarry C.M., Lippert R., Walenz B., Shatkay H., Dew I., Miller J.R., Flanigan M.J., Edwards N.J., Bolanos R., Fasulo D., Halldorsson B.V., Hannenhalli S., Turner R. Venter J.C.Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [4] | "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed: 15489334] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 2). |
| [5] | "Spastin, the protein mutated in autosomal dominant hereditary spastic paraplegia, is involved in microtubule dynamics." Errico A., Ballabio A., Rugarli E.I. Hum. Mol. Genet. 11:153-163(2002) [PubMed: 11809724] [Abstract] Cited for: FUNCTION, SUBCELLULAR LOCATION, CHARACTERIZATION OF VARIANTS SPG4 ARG-370; CYS-381; LYS-386; ARG-388; VAL-426; TYR-448; LEU-460; CYS-499 AND VAL-556. |
| [6] | "The identification of a conserved domain in both spartin and spastin, mutated in hereditary spastic paraplegia." Ciccarelli F.D., Proukakis C., Patel H., Cross H., Azam S., Patton M.A., Bork P., Crosby A.H. Genomics 81:437-441(2003) [PubMed: 12676568] [Abstract] Cited for: DOMAIN MIT, PROBABLE FUNCTION. |
| [7] | "Identification of nuclear localisation sequences in spastin (SPG4) using a novel Tetra-GFP reporter system." Beetz C., Brodhun M., Moutzouris K., Kiehntopf M., Berndt A., Lehnert D., Deufel T., Bastmeyer M., Schickel J. Biochem. Biophys. Res. Commun. 318:1079-1084(2004) [PubMed: 15147984] [Abstract] Cited for: SUBCELLULAR LOCATION, NUCLEAR LOCALIZATION SIGNAL. |
| [8] | "Spastin interacts with the centrosomal protein NA14, and is enriched in the spindle pole, the midbody and the distal axon." Errico A., Claudiani P., D'Addio M., Rugarli E.I. Hum. Mol. Genet. 13:2121-2132(2004) [PubMed: 15269182] [Abstract] Cited for: INTERACTION WITH SSNA1 AND MICROTUBULES, SUBCELLULAR LOCATION. |
| [9] | "Spastin subcellular localization is regulated through usage of different translation start sites and active export from the nucleus." Claudiani P., Riano E., Errico A., Andolfi G., Rugarli E.I. Exp. Cell Res. 309:358-369(2005) [PubMed: 16026783] [Abstract] Cited for: ALTERNATIVE INITIATION, SUBCELLULAR LOCATION, NUCLEAR EXPORT SIGNALS, MUTAGENESIS OF MET-1 AND MET-87. |
| [10] | "The hereditary spastic paraplegia protein spastin interacts with the ESCRT-III complex-associated endosomal protein CHMP1B." Reid E., Connell J.W., Edwards T.L., Duley S., Brown S.E., Sanderson C.M. Hum. Mol. Genet. 14:19-38(2005) [PubMed: 15537668] [Abstract] Cited for: INTERACTION WITH CHMP1B, SUBCELLULAR LOCATION. |
| [11] | "Linking axonal degeneration to microtubule remodeling by Spastin-mediated microtubule severing." Evans K.J., Gomes E.R., Reisenweber S.M., Gundersen G.G., Lauring B.P. J. Cell Biol. 168:599-606(2005) [PubMed: 15716377] [Abstract] Cited for: FUNCTION, CATALYTIC ACTIVITY, BIOPHYSICOCHEMICAL PROPERTIES, INTERACTION WITH MICROTUBULES, SUBCELLULAR LOCATION, MUTAGENESIS OF LYS-388 AND GLU-442, CHARACTERIZATION OF VARIANTS SPG4 LYS-344; LYS-347; LYS-386; ARG-388 AND CYS-499. |
| [12] | "Human spastin has multiple microtubule-related functions." Salinas S., Carazo-Salas R.E., Proukakis C., Cooper J.M., Weston A.E., Schiavo G., Warner T.T. J. Neurochem. 95:1411-1420(2005) [PubMed: 16219033] [Abstract] Cited for: FUNCTION, CATALYTIC ACTIVITY, ASSOCIATION WITH MICROTUBULES, SUBCELLULAR LOCATION. |
| [13] | "Subcellular localization of spastin: implications for the pathogenesis of hereditary spastic paraplegia." Svenson I.K., Kloos M.T., Jacon A., Gallione C., Horton A.C., Pericak-Vance M.A., Ehlers M.D., Marchuk D.A. Neurogenetics 6:135-141(2005) [PubMed: 15891913] [Abstract] Cited for: SUBCELLULAR LOCATION, CHARACTERIZATION OF VARIANT SPG4 ARG-388. |
| [14] | "ZFYVE27 (SPG33), a novel spastin-binding protein, is mutated in hereditary spastic paraplegia." Mannan A.U., Krawen P., Sauter S.M., Boehm J., Chronowska A., Paulus W., Neesen J., Engel W. Am. J. Hum. Genet. 79:351-357(2006) [PubMed: 16826525] [Abstract] Cited for: INTERACTION WITH ZFYVE27. |
| [15] | "Spastin and atlastin, two proteins mutated in autosomal-dominant hereditary spastic paraplegia, are binding partners." Sanderson C.M., Connell J.W., Edwards T.L., Bright N.A., Duley S., Thompson A., Luzio J.P., Reid E. Hum. Mol. Genet. 15:307-318(2006) [PubMed: 16339213] [Abstract] Cited for: INTERACTION WITH ATL1, SUBCELLULAR LOCATION, CHARACTERIZATION OF VARIANT SPG4 ARG-388. |
| [16] | "Spastin, the most commonly mutated protein in hereditary spastic paraplegia interacts with Reticulon 1 an endoplasmic reticulum protein." Mannan A.U., Boehm J., Sauter S.M., Rauber A., Byrne P.C., Neesen J., Engel W. Neurogenetics 7:93-103(2006) [PubMed: 16602018] [Abstract] Cited for: INTERACTION WITH RTN1, SUBCELLULAR LOCATION. |
| [17] | "Interaction of two hereditary spastic paraplegia gene products, spastin and atlastin, suggests a common pathway for axonal maintenance." Evans K.J., Keller C., Pavur K., Glasgow K., Conn B., Lauring B.P. Proc. Natl. Acad. Sci. U.S.A. 103:10666-10671(2006) [PubMed: 16815977] [Abstract] Cited for: CATALYTIC ACTIVITY, INTERACTION WITH ATL1, SUBCELLULAR LOCATION, MUTAGENESIS OF GLU-442. |
| [18] | "Recognition of C-terminal amino acids in tubulin by pore loops in Spastin is important for microtubule severing." White S.R., Evans K.J., Lary J., Cole J.L., Lauring B.P. J. Cell Biol. 176:995-1005(2007) [PubMed: 17389232] [Abstract] Cited for: FUNCTION, CATALYTIC ACTIVITY, BIOPHYSICOCHEMICAL PROPERTIES, HOMOHEXAMERIZATION, INTERACTION WITH TUBULIN AND MICROTUBULES, SUBCELLULAR LOCATION, MUTAGENESIS OF TYR-415; GLU-442; ARG-451 AND ALA-457, CHARACTERIZATION OF VARIANT SPG4 TYR-448. |
| [19] | "A cryptic promoter in the first exon of the SPG4 gene directs the synthesis of the 60-kDa spastin isoform." Mancuso G., Rugarli E.I. BMC Biol. 6:31-31(2008) [PubMed: 18613979] [Abstract] Cited for: ALTERNATIVE PROMOTER USAGE, CHARACTERIZATION OF VARIANT LEU-44. |
| [20] | "Spastin oligomerizes into a hexamer and the mutant spastin (E442Q) redistribute the wild-type spastin into filamentous microtubule." Pantakani D.V.K., Swapna L.S., Srinivasan N., Mannan A.U. J. Neurochem. 106:613-624(2008) [PubMed: 18410514] [Abstract] Cited for: CATALYTIC ACTIVITY, HOMOHEXAMERIZATION, SUBCELLULAR LOCATION, MUTAGENESIS OF GLU-442. |
| [21] | "A quantitative atlas of mitotic phosphorylation." Dephoure N., Zhou C., Villen J., Beausoleil S.A., Bakalarski C.E., Elledge S.J., Gygi S.P. Proc. Natl. Acad. Sci. U.S.A. 105:10762-10767(2008) [PubMed: 18669648] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-268; THR-303 AND THR-306, MASS SPECTROMETRY. Tissue: Cervix carcinoma. |
| [22] | "Quantitative phosphoproteomic analysis of T cell receptor signaling reveals system-wide modulation of protein-protein interactions." Mayya V., Lundgren D.H., Hwang S.-I., Rezaul K., Wu L., Eng J.K., Rodionov V., Han D.K. Sci. Signal. 2:RA46-RA46(2009) [PubMed: 19690332] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-268, MASS SPECTROMETRY. Tissue: Leukemic T-cell. |
| [23] | "Spastin couples microtubule severing to membrane traffic in completion of cytokinesis and secretion." Connell J.W., Lindon C., Luzio J.P., Reid E. Traffic 10:42-56(2009) [PubMed: 19000169] [Abstract] Cited for: FUNCTION, SUBCELLULAR LOCATION, CHARACTERIZATION OF VARIANT SPG4 ARG-388. |
| [24] | "Structural basis for midbody targeting of spastin by the ESCRT-III protein CHMP1B." Yang D., Rismanchi N., Renvoise B., Lippincott-Schwartz J., Blackstone C., Hurley J.H. Nat. Struct. Mol. Biol. 15:1278-1286(2008) [PubMed: 18997780] [Abstract] Cited for: X-RAY CRYSTALLOGRAPHY (2.5 ANGSTROMS) OF 112-196 IN COMPLEX WITH CHMP1B, INTERACTION WITH CHMP1B, SUBCELLULAR LOCATION, MUTAGENESIS OF HIS-120 AND PHE-124. |
| [25] | "Hereditary spastic paraplegia caused by mutations in the SPG4 gene." Buerger J., Fonknechten N., Hoeltzenbein M., Neumann L., Bratanoff E., Hazan J., Reis A. Eur. J. Hum. Genet. 8:771-776(2000) [PubMed: 11039577] [Abstract] Cited for: VARIANT SPG4 GLY-441. |
| [26] | "Spectrum of SPG4 mutations in autosomal dominant spastic paraplegia." Fonknechten N., Mavel D., Byrne P., Davoine C.-S., Cruaud C., Bonsch D., Samson D., Coutinho P., Hutchinson M., McMonagle P., Burgunder J.-M., Tartaglione A., Heinzlef O., Feki I., Deufel T., Parfrey N., Brice A., Fontaine B. Hazan J.Hum. Mol. Genet. 9:637-644(2000) [PubMed: 10699187] [Abstract] Cited for: VARIANTS SPG4 CYS-362; ARG-370; CYS-381; LYS-386; ARG-388; VAL-426; TYR-448; LEU-460; CYS-499; ASN-555 AND VAL-556. |
| [27] | "Mutation analysis of the spastin gene (SPG4) in patients with hereditary spastic paraparesis." Lindsey J.C., Lusher M.E., McDermott C.J., White K.D., Reid E., Rubinsztein D.C., Bashir R., Hazan J., Shaw P.J., Bushby K.M.D. J. Med. Genet. 37:759-765(2000) [PubMed: 11015453] [Abstract] Cited for: VARIANTS SPG4 LEU-44; GLY-424 AND HIS-584. |
| [28] | "Novel mutations in spastin gene and absence of correlation with age at onset of symptoms." Hentati A., Deng H.-X., Zhai H., Chen W., Yang Y., Hung W.-Y., Azim A.C., Bohlega S., Tandan R., Warner C., Laing N.G., Cambi F., Mitsumoto H., Roos R.P., Boustany R.-M.N., Ben-Hamida M., Hentati F., Siddique T. Neurology 55:1388-1390(2000) [PubMed: 11087788] [Abstract] Cited for: VARIANTS SPG4 PHE-436 AND ASP-559. |
| [29] | "Identification and expression analysis of spastin gene mutations in hereditary spastic paraplegia." Svenson I.K., Ashley-Koch A.E., Gaskell P.C., Riney T.J., Cumming W.J.K., Kingston H.M., Hogan E.L., Boustany R.-M.N., Vance J.M., Nance M.A., Pericak-Vance M.A., Marchuk D.A. Am. J. Hum. Genet. 68:1077-1085(2001) [PubMed: 11309678] [Abstract] Cited for: VARIANTS SPG4 CYS-499 AND GLY-562. |
| [30] | "A Japanese SPG4 family with a novel missense mutation of the SPG4 gene: intrafamilial variability in age at onset and clinical severity." Namekawa M., Takiyama Y., Sakoe K., Nagaki H., Shimazaki H., Yoshimura M., Ikeguchi K., Nakano I., Nishizawa M. Acta Neurol. Scand. 106:387-391(2002) [PubMed: 12460147] [Abstract] Cited for: VARIANT SPG4 VAL-485. |
| [31] | "Spectrum of SPG4 mutations in a large collection of North American families with hereditary spastic paraplegia." Meijer I.A., Hand C.K., Cossette P., Figlewicz D.A., Rouleau G.A. Arch. Neurol. 59:281-286(2002) [PubMed: 11843700] [Abstract] Cited for: VARIANTS SPG4 LEU-399; VAL-426; LEU-489; ASP-559 AND GLN-562. |
| [32] | "Mutation analysis of the spastin gene (SPG4) in patients in Germany with autosomal dominant hereditary spastic paraplegia." Sauter S.M., Miterski B., Klimpe S., Boensch D., Schoels L., Visbeck A., Papke T., Hopf H.C., Engel W., Deufel T., Epplen J.T., Neesen J. Hum. Mutat. 20:127-132(2002) [PubMed: 12124993] [Abstract] Cited for: VARIANTS SPG4 ARG-407; TYR-551 AND ILE-615. |
| [33] | "Spastin gene mutation in Japanese with hereditary spastic paraplegia." Yabe I., Sasaki H., Tashiro K., Matsuura T., Takegami T., Satoh T. J. Med. Genet. 39:E46-E46(2002) [PubMed: 12161613] [Abstract] Cited for: VARIANTS SPG4 LYS-347; ARG-388 AND CYS-499. |
| [34] | "Missense and splice site mutations in SPG4 suggest loss-of-function in dominant spastic paraplegia." Patrono C., Casali C., Tessa A., Cricchi F., Fortini D., Carrozzo R., Siciliano G., Bertini E., Santorelli F.M. J. Neurol. 249:200-205(2002) [PubMed: 11985387] [Abstract] Cited for: VARIANT SPG4 ASP-512. |
| [35] | "Three novel spastin (SPG4) mutations in families with autosomal dominant hereditary spastic paraplegia." Proukakis C., Hart P.E., Cornish A., Warner T.T., Crosby A.H. J. Neurol. Sci. 201:65-69(2002) [PubMed: 12163196] [Abstract] Cited for: VARIANT SPG4 PHE-404 DEL. |
| [36] | "A novel missense mutation (I344K) in the SPG4gene in a Korean family with autosomal-dominant hereditary spastic paraplegia." Ki C.S., Lee W.Y., Han do H., Sung D.H., Lee K.B., Lee K.A., Cho S.S., Cho S., Hwang H., Sohn K.M., Choi Y.J., Kim J.W. J. Hum. Genet. 47:473-477(2002) [PubMed: 12202986] [Abstract] Cited for: VARIANT SPG4 LYS-344. |
| [37] | "Screening of patients with hereditary spastic paraplegia reveals seven novel mutations in the SPG4 (Spastin) gene." Proukakis C., Auer-Grumbach M., Wagner K., Wilkinson P.A., Reid E., Patton M.A., Warner T.T., Crosby A.H. Hum. Mutat. 21:170-170(2003) [PubMed: 12552568] [Abstract] Cited for: VARIANT SPG4 LEU-503. |
| [38] | "Novel spastin mutations and their expression analysis in two Italian families." Molon A., Montagna P., Angelini C., Pegoraro E. Eur. J. Hum. Genet. 11:710-713(2003) [PubMed: 12939659] [Abstract] Cited for: VARIANT SPG4 PRO-534. |
| [39] | "Three novel mutations of the spastin gene in Chinese patients with hereditary spastic paraplegia." Tang B., Zhao G., Xia K., Pan Q., Luo W., Shen L., Long Z., Dai H., Zi X., Jiang H. Arch. Neurol. 61:49-55(2004) [PubMed: 14732620] [Abstract] Cited for: VARIANTS SPG4 GLN-378; VAL-390 AND LEU-515 DEL. |
| [40] | "Hereditary spastic paraplegia: clinical genetic study of 15 families." Orlacchio A., Kawarai T., Totaro A., Errico A., St George-Hyslop P.H., Rugarli E.I., Bernardi G. Arch. Neurol. 61:849-855(2004) [PubMed: 15210521] [Abstract] Cited for: VARIANT SPG4 SER-386. |
| [41] | "Intragenic modifiers of hereditary spastic paraplegia due to spastin gene mutations." Svenson I.K., Kloos M.T., Gaskell P.C., Nance M.A., Garbern J.Y., Hisanaga S., Pericak-Vance M.A., Ashley-Koch A.E., Marchuk D.A. Neurogenetics 5:157-164(2004) [PubMed: 15248095] [Abstract] Cited for: VARIANTS SPG4 VAL-470 AND GLY-562, VARIANTS LEU-44 AND GLN-45. |
| [42] | "Two novel mutations in the spastin gene (SPG4) found by DHPLC mutation analysis." Falco M., Scuderi C., Musumeci S., Sturnio M., Neri M., Bigoni S., Caniatti L., Fichera M. Neuromuscul. Disord. 14:750-753(2004) [PubMed: 15482961] [Abstract] Cited for: VARIANTS SPG4 GLY-459 AND CYS-460. |
| [43] | "A new SPG4 mutation in a variant form of spastic paraplegia with congenital arachnoid cysts." Orlacchio A., Gaudiello F., Totaro A., Floris R., St George-Hyslop P.H., Bernardi G., Kawarai T. Neurology 62:1875-1878(2004) [PubMed: 15159500] [Abstract] Cited for: VARIANT SPG4 ILE-614. |
| [44] | "Infantile hereditary spastic paraparesis due to codominant mutations in the spastin gene." Chinnery P.F., Keers S.M., Holden M.J., Ramesh V., Dalton A. Neurology 63:710-712(2004) [PubMed: 15326248] [Abstract] Cited for: VARIANTS SPG4 LEU-44 AND LEU-361. |
| [45] | "Eight novel mutations in SPG4 in a large sample of patients with hereditary spastic paraplegia." Crippa F., Panzeri C., Martinuzzi A., Arnoldi A., Redaelli F., Tonelli A., Baschirotto C., Vazza G., Mostacciuolo M.L., Daga A., Orso G., Profice P., Trabacca A., D'Angelo M.G., Comi G.P., Galbiati S., Lamperti C., Bonato S. Bassi M.T.Arch. Neurol. 63:750-755(2006) [PubMed: 16682546] [Abstract] Cited for: VARIANTS SPG4 VAL-195; VAL-406; GLY-493; HIS-499; TRP-503 AND CYS-607. |
| [46] | "Novel spastin (SPG4) mutations in Italian patients with hereditary spastic paraplegia." Magariello A., Muglia M., Patitucci A., Mazzei R., Conforti F.L., Gabriele A.L., Sprovieri T., Ungaro C., Gambardella A., Mancuso M., Siciliano G., Branca D., Aguglia U., de Angelis M.V., Longo K., Quattrone A. Neuromuscul. Disord. 16:387-390(2006) [PubMed: 16684598] [Abstract] Cited for: VARIANT SPG4 LEU-435. |
| [47] | "The consensus coding sequences of human breast and colorectal cancers." Sjoeblom T., Jones S., Wood L.D., Parsons D.W., Lin J., Barber T.D., Mandelker D., Leary R.J., Ptak J., Silliman N., Szabo S., Buckhaults P., Farrell C., Meeh P., Markowitz S.D., Willis J., Dawson D., Willson J.K.V. Velculescu V.E.Science 314:268-274(2006) [PubMed: 16959974] [Abstract] Cited for: VARIANT [LARGE SCALE ANALYSIS] LEU-423. |
| + | Additional computationally mapped references. |
Web resources
| GeneReviews |
| Protein Spotlight The making of crooked - Issue 104 of April 2009 |
Cross-references
Sequence databases | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| EMBL GenBank DDBJ | AJ246001 mRNA. Translation: CAB60141.1. AJ246003 Genomic DNA. Translation: CAB60208.1. AB029006 mRNA. Translation: BAA83035.1. CH471053 Genomic DNA. Translation: EAX00462.1. BC150260 mRNA. Translation: AAI50261.1. | ||||||||||||
| IPI | IPI00002707. IPI00219816. IPI00923524. IPI00923553. | ||||||||||||
| RefSeq | NP_055761.2. NM_014946.3. NP_955468.1. NM_199436.1. | ||||||||||||
| UniGene | Hs.468091. | ||||||||||||
3D structure databases | |||||||||||||
| PDBe RCSB PDB PDBj |
| ||||||||||||
| ProteinModelPortal | Q9UBP0. | ||||||||||||
| SMR | Q9UBP0. Positions 112-196, 324-608. | ||||||||||||
| ModBase | Search... | ||||||||||||
Protein-protein interaction databases | |||||||||||||
| IntAct | Q9UBP0. 2 interactions. | ||||||||||||
| STRING | Q9UBP0. | ||||||||||||
PTM databases | |||||||||||||
| PhosphoSite | Q9UBP0. | ||||||||||||
Polymorphism databases | |||||||||||||
| DMDM | 12230611. | ||||||||||||
Proteomic databases | |||||||||||||
| PeptideAtlas | Q9UBP0. | ||||||||||||
| PRIDE | Q9UBP0. | ||||||||||||
Protocols and materials databases | |||||||||||||
| StructuralBiologyKnowledgebase | Search... | ||||||||||||
Genome annotation databases | |||||||||||||
| Ensembl | ENST00000315285; ENSP00000320885; ENSG00000021574. | ||||||||||||
| GeneID | 6683. | ||||||||||||
| KEGG | hsa:6683. | ||||||||||||
| UCSC | uc002roc.1. human. uc002rod.1. human. | ||||||||||||
Organism-specific databases | |||||||||||||
| CTD | 6683. | ||||||||||||
| GeneCards | GC02P032288. | ||||||||||||
| H-InvDB | HIX0001953. | ||||||||||||
| HGNC | HGNC:11233. SPAST. | ||||||||||||
| HPA | HPA017311. | ||||||||||||
| MIM | 182601. phenotype. 604277. gene. | ||||||||||||
| neXtProt | NX_Q9UBP0. | ||||||||||||
| Orphanet | 100985. Autosomal dominant spastic paraplegia type 4. | ||||||||||||
| PharmGKB | PA36063. | ||||||||||||
| HUGE | Search... | ||||||||||||
| GenAtlas | Search... | ||||||||||||
Phylogenomic databases | |||||||||||||
| eggNOG | prNOG13108. | ||||||||||||
| GeneTree | ENSGT00570000078874. | ||||||||||||
| HOGENOM | HBG724153. | ||||||||||||
| HOVERGEN | HBG108502. | ||||||||||||
| InParanoid | Q9UBP0. | ||||||||||||
| OMA | THKSTPK. | ||||||||||||
| OrthoDB | EOG4NZTTF. | ||||||||||||
| PhylomeDB | Q9UBP0. | ||||||||||||
Gene expression databases | |||||||||||||
| ArrayExpress | Q9UBP0. | ||||||||||||
| Bgee | Q9UBP0. | ||||||||||||
| CleanEx | HS_SPAST. | ||||||||||||
| Genevestigator | Q9UBP0. | ||||||||||||
Family and domain databases | |||||||||||||
| InterPro | IPR003593. ATPase_AAA+_core. IPR003959. ATPase_AAA_core. IPR003960. ATPase_AAA_CS. IPR007330. MIT. IPR017179. Spastin. [Graphical view] | ||||||||||||
| KO | K13254. | ||||||||||||
| Pfam | PF00004. AAA. 1 hit. PF04212. MIT. 1 hit. [Graphical view] | ||||||||||||
| PIRSF | PIRSF037338. Spastin. 1 hit. | ||||||||||||
| SMART | SM00382. AAA. 1 hit. SM00745. MIT. 1 hit. [Graphical view] | ||||||||||||
| PROSITE | PS00674. AAA. 1 hit. [Graphical view] | ||||||||||||
| ProtoNet | Search... | ||||||||||||
Other | |||||||||||||
| NextBio | 26047. | ||||||||||||
| SOURCE | Search... | ||||||||||||
Entry information
| Entry name | SPAST_HUMAN | ||||||||
| Accession | Primary (citable) accession number: Q9UBP0 Secondary accession number(s): A7E2A7, Q9UPR9 | ||||||||
| Entry history |
| ||||||||
| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Chordata Protein Annotation Program | ||||||||
| Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. | ||||||||
Relevant documents
| Human chromosome 2 Human chromosome 2: entries, gene names and cross-references to MIM |
| Human entries with polymorphisms or disease mutations List of human entries with polymorphisms or disease mutations |
| Human polymorphisms and disease mutations Index of human polymorphisms and disease mutations |
| MIM cross-references Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot |
| PDB cross-references Index of Protein Data Bank (PDB) cross-references |
| SIMILARITY comments Index of protein domains and families |
| Protein Spotlight Protein Spotlight articles and cited UniProtKB/Swiss-Prot entries |

Clusters with