Q9UBL3 (ASH2L_HUMAN) Reviewed, UniProtKB/Swiss-Prot
Last modified
January 25, 2012.
Version 102.
History...
Names·Attributes·General annotation·Ontologies·Interactions·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Interactions·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Set1/Ash2 histone methyltransferase complex subunit ASH2 Alternative name(s): ASH2-like protein | ||||
| Gene names |
| ||||
| Organism | Homo sapiens (Human) | ||||
| Taxonomic identifier | 9606 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo |
Protein attributes
| Sequence length | 628 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at protein level |
General annotation (Comments)
| Function | Component of the Set1/Ash2 histone methyltransferase (HMT) complex, a complex that specifically methylates 'Lys-4' of histone H3, but not if the neighboring 'Lys-9' residue is already methylated. As part of the MLL1/MLL complex it is involved in methylation and dimethylation at 'Lys-4' of histone H3. May function as a transcriptional regulator. May play a role in hematopoiesis. Ref.6 Ref.15 |
| Subunit structure | Interacts with HCFC1. Core component of several methyltransferase-containing complexes including MLL1/MLL, ASCOM, MLL2/MLL3 and MLL3/MLL4. Each complex is at least composed of ASH2L, RBBP5, DPY30, WDR5, one or more specific histone methyltransferases (MLL, MLL2, MLL3 and MLL4), and the facultative components C16orf53/PA1, C17orf49, CHD8, E2F6, HCFC1, HCFC2, HSP70, IN80C, KDM6A, KIAA1267, LAS1L, MAX, MCRS1, MEN1, MGA, KAT8/MOF, NCOA6, PAXIP1/PTIP, PELP1, PHF20, PRP31, RING2, RUVB1/TIP49A, RUVB2/TIP49B, SENP3, TAF1, TAF4, TAF6, TAF7, TAF9 and TEX10. Interacts with DPY30 and RBBP5; the interaction is direct. Component of the SET1 complex, at least composed of the catalytic subunit (SETD1A or SETD1B), WDR5, WDR82, RBBP5, ASH2L/ASH2, CXXC1/CFP1, HCFC1 and DPY30. Interacts with SETD1A and SETD1B. Ref.6 Ref.7 Ref.13 Ref.15 |
| Subcellular location | |
| Tissue specificity | Ubiquitously expressed. Predominantly expressed in adult heart and testis and fetal lung and liver, with barely detectable expression in adult lung, liver, kidney, prostate, and peripheral leukocytes. Ref.2 |
| Sequence similarities | Contains 1 B30.2/SPRY domain. |
Ontologies
Binary interactions
With | Entry | #Exp. | IntAct | Notes |
|---|---|---|---|---|
| DPY30 | Q9C005 | 4 | EBI-540797,EBI-744973 | |
| HCFC1 | P51610 | 4 | EBI-540797,EBI-396176 | |
| RBBP5 | Q15291 | 10 | EBI-540797,EBI-592823 |
Alternative products
| This entry describes 3 isoforms produced by alternative splicing. [Align] [Select] | ||||||
| Isoform 1 (identifier: Q9UBL3-1) Also known as: ASH2L1; This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry. | ||||||
| Isoform 2 (identifier: Q9UBL3-2) Also known as: ASH2L2; The sequence of this isoform differs from the canonical sequence as follows: 1-94: Missing. 541-573: Missing. | ||||||
| Isoform 3 (identifier: Q9UBL3-3) The sequence of this isoform differs from the canonical sequence as follows: 1-94: Missing. | ||||||
| Note: No experimental confirmation available. |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||||||||||||||||||||||||||||||||||
Molecule processing | |||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 628 | 628 | Set1/Ash2 histone methyltransferase complex subunit ASH2 | PRO_0000064697 | |||||||||||||||||||||||||||||||||||||
Regions | |||||||||||||||||||||||||||||||||||||||||
| Domain | 360 – 583 | 224 | B30.2/SPRY | ||||||||||||||||||||||||||||||||||||||
| Zinc finger | 117 – 150 | 34 | C4-type | ||||||||||||||||||||||||||||||||||||||
Natural variations | |||||||||||||||||||||||||||||||||||||||||
| Alternative sequence | 1 – 94 | 94 | Missing in isoform 2 and isoform 3. | VSP_007577 | |||||||||||||||||||||||||||||||||||||
| Alternative sequence | 541 – 573 | 33 | Missing in isoform 2. | VSP_007578 | |||||||||||||||||||||||||||||||||||||
| Natural variant | 478 | 1 | S → F. Corresponds to variant rs34167006 [ dbSNP | Ensembl ]. | VAR_050679 | |||||||||||||||||||||||||||||||||||||
Experimental info | |||||||||||||||||||||||||||||||||||||||||
| Sequence conflict | 212 | 1 | Q → H in AAC13564. Ref.1 | ||||||||||||||||||||||||||||||||||||||
| Sequence conflict | 217 | 1 | M → T in AAC13564. Ref.1 | ||||||||||||||||||||||||||||||||||||||
| Sequence conflict | 292 | 1 | S → T in AAC13563. Ref.1 | ||||||||||||||||||||||||||||||||||||||
| Sequence conflict | 351 | 1 | H → Q in AAC13564. Ref.1 | ||||||||||||||||||||||||||||||||||||||
| Sequence conflict | 360 | 1 | L → I in AAC13564. Ref.1 | ||||||||||||||||||||||||||||||||||||||
| Sequence conflict | 369 | 1 | P → S in AAC13564. Ref.1 | ||||||||||||||||||||||||||||||||||||||
Secondary structure | |||||||||||||||||||||||||||||||||||||||||
Helix Strand Turn | |||||||||||||||||||||||||||||||||||||||||
| Beta strand | 114 – 116 | 3 | |||||||||||||||||||||||||||||||||||||||
| Beta strand | 123 – 125 | 3 | |||||||||||||||||||||||||||||||||||||||
| Helix | 126 – 128 | 3 | |||||||||||||||||||||||||||||||||||||||
| Beta strand | 142 – 146 | 5 | |||||||||||||||||||||||||||||||||||||||
| Turn | 148 – 150 | 3 | |||||||||||||||||||||||||||||||||||||||
| Beta strand | 157 – 160 | 4 | |||||||||||||||||||||||||||||||||||||||
| Helix | 165 – 183 | 19 | |||||||||||||||||||||||||||||||||||||||
| Turn | 193 – 196 | 4 | |||||||||||||||||||||||||||||||||||||||
| Helix | 197 – 203 | 7 | |||||||||||||||||||||||||||||||||||||||
| Helix | 205 – 207 | 3 | |||||||||||||||||||||||||||||||||||||||
| Helix | 219 – 221 | 3 | |||||||||||||||||||||||||||||||||||||||
| Helix | 223 – 228 | 6 | |||||||||||||||||||||||||||||||||||||||
| Turn | 231 – 233 | 3 | |||||||||||||||||||||||||||||||||||||||
| Beta strand | 237 – 239 | 3 | |||||||||||||||||||||||||||||||||||||||
| Helix | 248 – 250 | 3 | |||||||||||||||||||||||||||||||||||||||
| Beta strand | 252 – 254 | 3 | |||||||||||||||||||||||||||||||||||||||
| Helix | 261 – 263 | 3 | |||||||||||||||||||||||||||||||||||||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "ASH2L: alternative splicing and downregulation during induced megakaryocytic differentiation of multipotential leukemia cell lines." Wang J., Zhou Y., Yin B., Du G., Huang X., Li G., Shen Y., Yuan J., Qiang B. J. Mol. Med. 79:399-405(2001) [PubMed: 11466562] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORMS 1 AND 2). Tissue: Fetal brain. |
| [2] | "Cloning and characterization of ASH2L and ash2l, human and mouse homologs of the Drosophila ash2 gene." Ikegawa S., Isomura M., Koshizuka Y., Nakamura Y. Cytogenet. Cell Genet. 84:167-172(1999) [PubMed: 10393421] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA] (ISOFORM 1), TISSUE SPECIFICITY. |
| [3] | "Complete sequencing and characterization of 21,243 full-length human cDNAs." Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S. Sugano S.Nat. Genet. 36:40-45(2004) [PubMed: 14702039] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 3). |
| [4] | Mural R.J., Istrail S., Sutton G.G., Florea L., Halpern A.L., Mobarry C.M., Lippert R., Walenz B., Shatkay H., Dew I., Miller J.R., Flanigan M.J., Edwards N.J., Bolanos R., Fasulo D., Halldorsson B.V., Hannenhalli S., Turner R. Venter J.C.Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [5] | "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed: 15489334] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 3). Tissue: Skin. |
| [6] | "Human Sin3 deacetylase and trithorax-related Set1/Ash2 histone H3-K4 methyltransferase are tethered together selectively by the cell-proliferation factor HCF-1." Wysocka J., Myers M.P., Laherty C.D., Eisenman R.N., Herr W. Genes Dev. 17:896-911(2003) [PubMed: 12670868] [Abstract] Cited for: FUNCTION, INTERACTION WITH HCFC1. |
| [7] | "Menin associates with a trithorax family histone methyltransferase complex and with the hoxc8 locus." Hughes C.M., Rozenblatt-Rosen O., Milne T.A., Copeland T.D., Levine S.S., Lee J.C., Hayes D.N., Shanmugam K.S., Bhattacharjee A., Biondi C.A., Kay G.F., Hayward N.K., Hess J.L., Meyerson M. Mol. Cell 13:587-597(2004) [PubMed: 14992727] [Abstract] Cited for: INTERACTION WITH MEN1. |
| [8] | "Leukemia proto-oncoprotein MLL forms a SET1-like histone methyltransferase complex with menin to regulate Hox gene expression." Yokoyama A., Wang Z., Wysocka J., Sanyal M., Aufiero D.J., Kitabayashi I., Herr W., Cleary M.L. Mol. Cell. Biol. 24:5639-5649(2004) [PubMed: 15199122] [Abstract] Cited for: IDENTIFICATION IN THE MLL-LIKE COMPLEX. |
| [9] | "Physical association and coordinate function of the H3 K4 methyltransferase MLL1 and the H4 K16 acetyltransferase MOF." Dou Y., Milne T.A., Tackett A.J., Smith E.R., Fukuda A., Wysocka J., Allis C.D., Chait B.T., Hess J.L., Roeder R.G. Cell 121:873-885(2005) [PubMed: 15960975] [Abstract] Cited for: IDENTIFICATION IN THE MLL1/MLL COMPLEX. |
| [10] | "CpG-binding protein (CXXC finger protein 1) is a component of the mammalian Set1 histone H3-Lys4 methyltransferase complex, the analogue of the yeast Set1/COMPASS complex." Lee J.-H., Skalnik D.G. J. Biol. Chem. 280:41725-41731(2005) [PubMed: 16253997] [Abstract] Cited for: IDENTIFICATION IN THE SET1 COMPLEX. |
| [11] | "Identification and characterization of the human Set1B histone H3-Lys4 methyltransferase complex." Lee J.-H., Tate C.M., You J.-S., Skalnik D.G. J. Biol. Chem. 282:13419-13428(2007) [PubMed: 17355966] [Abstract] Cited for: SUBCELLULAR LOCATION, IDENTIFICATION IN THE SET1 COMPLEX. |
| [12] | "PTIP associates with MLL3- and MLL4-containing histone H3 lysine 4 methyltransferase complex." Cho Y.-W., Hong T., Hong S., Guo H., Yu H., Kim D., Guszczynski T., Dressler G.R., Copeland T.D., Kalkum M., Ge K. J. Biol. Chem. 282:20395-20406(2007) [PubMed: 17500065] [Abstract] Cited for: IDENTIFICATION BY MASS SPECTROMETRY, IDENTIFICATION IN THE MLL-LIKE COMPLEX. |
| [13] | "Wdr82 is a C-terminal domain-binding protein that recruits the Setd1A Histone H3-Lys4 methyltransferase complex to transcription start sites of transcribed human genes." Lee J.H., Skalnik D.G. Mol. Cell. Biol. 28:609-618(2008) [PubMed: 17998332] [Abstract] Cited for: IDENTIFICATION IN SET1 COMPLEX, INTERACTION WITH SETD1A AND SETD1B. |
| [14] | "Molecular regulation of H3K4 trimethylation by Wdr82, a component of human Set1/COMPASS." Wu M., Wang P.F., Lee J.S., Martin-Brown S., Florens L., Washburn M., Shilatifard A. Mol. Cell. Biol. 28:7337-7344(2008) [PubMed: 18838538] [Abstract] Cited for: IDENTIFICATION IN SET1 COMPLEX. |
| [15] | "On the mechanism of multiple lysine methylation by the human mixed lineage leukemia protein-1 (MLL1) core complex." Patel A., Dharmarajan V., Vought V.E., Cosgrove M.S. J. Biol. Chem. 284:24242-24256(2009) [PubMed: 19556245] [Abstract] Cited for: FUNCTION, CHARACTERIZATION OF THE MLL1/MLL COMPLEX, INTERACTION WITH DPY30 AND RBBP5. |
| [16] | "Initial characterization of the human central proteome." Burkard T.R., Planyavsky M., Kaupe I., Breitwieser F.P., Buerckstuemmer T., Bennett K.L., Superti-Furga G., Colinge J. BMC Syst. Biol. 5:17-17(2011) [PubMed: 21269460] [Abstract] Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| EMBL GenBank DDBJ | AF056718 mRNA. Translation: AAC13564.1. AF056717 mRNA. Translation: AAC13563.1. AB022785 Genomic DNA. Translation: BAA74520.1. AB020982 mRNA. Translation: BAA35127.1. AK291938 mRNA. Translation: BAF84627.1. CH471080 Genomic DNA. Translation: EAW63337.1. CH471080 Genomic DNA. Translation: EAW63336.1. CH471080 Genomic DNA. Translation: EAW63340.1. BC015936 mRNA. Translation: AAH15936.1. | ||||||||||||||||||
| IPI | IPI00328658. IPI00328659. IPI00333837. | ||||||||||||||||||
| RefSeq | NP_001098684.1. NM_001105214.1. NP_004665.2. NM_004674.3. | ||||||||||||||||||
| UniGene | Hs.521530. | ||||||||||||||||||
3D structure databases | |||||||||||||||||||
| PDBe RCSB PDB PDBj |
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| ProteinModelPortal | Q9UBL3. | ||||||||||||||||||
| SMR | Q9UBL3. Positions 105-269. | ||||||||||||||||||
| ModBase | Search... | ||||||||||||||||||
Protein-protein interaction databases | |||||||||||||||||||
| DIP | DIP-29222N. | ||||||||||||||||||
| IntAct | Q9UBL3. 26 interactions. | ||||||||||||||||||
| MINT | MINT-1194078. | ||||||||||||||||||
| STRING | Q9UBL3. | ||||||||||||||||||
PTM databases | |||||||||||||||||||
| PhosphoSite | Q9UBL3. | ||||||||||||||||||
Polymorphism databases | |||||||||||||||||||
| DMDM | 32141382. | ||||||||||||||||||
Proteomic databases | |||||||||||||||||||
| PRIDE | Q9UBL3. | ||||||||||||||||||
Protocols and materials databases | |||||||||||||||||||
| StructuralBiologyKnowledgebase | Search... | ||||||||||||||||||
Genome annotation databases | |||||||||||||||||||
| Ensembl | ENST00000343823; ENSP00000340896; ENSG00000129691. | ||||||||||||||||||
| GeneID | 9070. | ||||||||||||||||||
| KEGG | hsa:9070. | ||||||||||||||||||
| UCSC | uc003xkt.2. human. uc003xku.2. human. uc010lwa.1. human. | ||||||||||||||||||
Organism-specific databases | |||||||||||||||||||
| CTD | 9070. | ||||||||||||||||||
| GeneCards | GC08P037963. | ||||||||||||||||||
| H-InvDB | HIX0007454. | ||||||||||||||||||
| HGNC | HGNC:744. ASH2L. | ||||||||||||||||||
| HPA | HPA042289. | ||||||||||||||||||
| MIM | 604782. gene. | ||||||||||||||||||
| neXtProt | NX_Q9UBL3. | ||||||||||||||||||
| PharmGKB | PA25044. | ||||||||||||||||||
| GenAtlas | Search... | ||||||||||||||||||
Phylogenomic databases | |||||||||||||||||||
| eggNOG | prNOG11720. | ||||||||||||||||||
| GeneTree | ENSGT00390000010474. | ||||||||||||||||||
| HOGENOM | HBG380330. | ||||||||||||||||||
| HOVERGEN | HBG050592. | ||||||||||||||||||
| InParanoid | Q9UBL3. | ||||||||||||||||||
| OMA | HPMSDMG. | ||||||||||||||||||
| OrthoDB | EOG42Z4PS. | ||||||||||||||||||
| PhylomeDB | Q9UBL3. | ||||||||||||||||||
Gene expression databases | |||||||||||||||||||
| ArrayExpress | Q9UBL3. | ||||||||||||||||||
| Bgee | Q9UBL3. | ||||||||||||||||||
| CleanEx | HS_ASH2L. | ||||||||||||||||||
| Genevestigator | Q9UBL3. | ||||||||||||||||||
Family and domain databases | |||||||||||||||||||
| InterPro | IPR001870. B30.2/SPRY. IPR008985. ConA-like_lec_gl. IPR018355. SPla/RYanodine_receptor_subgr. IPR003877. SPRY_rcpt. [Graphical view] | ||||||||||||||||||
| KO | K14964. | ||||||||||||||||||
| Pfam | PF00622. SPRY. 1 hit. [Graphical view] | ||||||||||||||||||
| SMART | SM00449. SPRY. 1 hit. [Graphical view] | ||||||||||||||||||
| SUPFAM | SSF49899. ConA_like_lec_gl. 1 hit. | ||||||||||||||||||
| PROSITE | PS50188. B302_SPRY. 1 hit. [Graphical view] | ||||||||||||||||||
| ProtoNet | Search... | ||||||||||||||||||
Other | |||||||||||||||||||
| NextBio | 33985. | ||||||||||||||||||
| SOURCE | Search... | ||||||||||||||||||
Entry information
| Entry name | ASH2L_HUMAN | ||||||||
| Accession | Primary (citable) accession number: Q9UBL3 Secondary accession number(s): A8K7C3 Q96B62 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Chordata Protein Annotation Program | ||||||||
| Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. | ||||||||
Relevant documents
| Human chromosome 8 Human chromosome 8: entries, gene names and cross-references to MIM |
| Human entries with polymorphisms or disease mutations List of human entries with polymorphisms or disease mutations |
| Human polymorphisms and disease mutations Index of human polymorphisms and disease mutations |
| MIM cross-references Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot |
| PDB cross-references Index of Protein Data Bank (PDB) cross-references |
| SIMILARITY comments Index of protein domains and families |

Clusters with