Reviewed,
UniProtKB/Swiss-Prot Q9UBF8 (PI4KB_HUMAN)
Last modified
June 16, 2009.
Version 71.
History...
Clusters with 100%,
90%,
50% identity |
Documents (3) |
Third-party data |
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Names and origin
| Protein names | Recommended name: Phosphatidylinositol 4-kinase beta Short name=PtdIns 4-kinase beta Short name=PI4K-beta Short name=PI4Kbeta EC=2.7.1.67 Alternative name(s): NPIK PI4K92 | ||||
| Gene names |
| ||||
| Organism | Homo sapiens (Human) | ||||
| Taxonomic identifier | 9606 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo |
Protein attributes
| Sequence length | 816 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is not processed. |
| Protein existence | Evidence at protein level. |
General annotation (Comments)
| Function | Phosphorylates phosphatidylinositol (PI) in the first committed step in the production of the second messenger inositol-1,4,5,-trisphosphate (PIP). May regulate Golgi disintegration/reorganization during mitosis, possibly via its phosphorylation. Ref.1 Ref.9 Ref.11 |
| Catalytic activity | ATP + 1-phosphatidyl-1D-myo-inositol = ADP + 1-phosphatidyl-1D-myo-inositol 4-phosphate. Ref.1 |
| Enzyme regulation | Inhibited by wortmannin. Ref.3 |
| Subcellular location | Endomembrane system. Mitochondrion outer membrane; Peripheral membrane protein. Rough endoplasmic reticulum membrane; Peripheral membrane protein. Golgi apparatus. Note: Found in the outer membrane of mitochondria and membranes of the rough endoplasmic reticulum. Recruited to the Golgi complex by the small GTPase ARF to stimulate the synthesis of phosphatidylinositol 4,5-biphosphate (PIP2) on the Golgi complex. |
| Tissue specificity | Widely expressed with highest levels in heart, skeletal muscle, pancreas, testis and ovary. Weakly expressed in liver. Ref.1 Ref.3 Ref.2 |
| Sequence similarities | Belongs to the PI3/PI4-kinase family. Type III PI4K subfamily. Contains 1 PI3K/PI4K domain. |
| Sequence caution | The sequence CAH70326.1 differs from that shown. Reason: Erroneous gene model prediction. The sequence EAW53450.1 differs from that shown. Reason: Erroneous gene model prediction. |
Ontologies
Binary interactions
With | Entry | #Exp. | IntAct | Notes |
|---|---|---|---|---|
| YWHAB | P31946 | 1 | EBI-1053214,EBI-359815 | |
| YWHAG | P61981 | 1 | EBI-1053214,EBI-359832 | |
| YWHAQ | P27348 | 1 | EBI-1053214,EBI-359854 |
Alternative products
| This entry describes 3 isoforms produced by alternative splicing. [Align] [Select] | ||||||
| Isoform 1 Ref.1 (identifier: Q9UBF8-1) Also known as: NPIK-B; This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry. | ||||||
| Isoform 2 Ref.1 (identifier: Q9UBF8-2) Also known as: NPIK-C; The sequence of this isoform differs from the canonical sequence as follows: 304-318: Missing. | ||||||
| Isoform 3 (identifier: Q9UBF8-3) The sequence of this isoform differs from the canonical sequence as follows: 1-332: Missing. |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 816 | 816 | Phosphatidylinositol 4-kinase beta | PRO_0000088829 | |||||
Regions | |||||||||
| Domain | 558 – 765 | 208 | PI3K/PI4K | ||||||
Amino acid modifications | |||||||||
| Modified residue | 258 | 1 | Phosphoserine Ref.15 Ref.10 | ||||||
| Modified residue | 263 | 1 | Phosphothreonine Ref.15 Ref.10 | ||||||
| Modified residue | 266 | 1 | Phosphoserine Ref.14 Ref.10 | ||||||
| Modified residue | 277 | 1 | Phosphoserine Ref.15 Ref.13 Ref.10 | ||||||
| Modified residue | 294 | 1 | Phosphoserine Ref.15 Ref.10 | ||||||
| Modified residue | 428 | 1 | Phosphoserine Ref.15 Ref.12 | ||||||
| Modified residue | 438 | 1 | Phosphothreonine Ref.10 | ||||||
| Modified residue | 511 | 1 | Phosphoserine Ref.15 Ref.14 Ref.12 Ref.10 | ||||||
| Modified residue | 517 | 1 | Phosphothreonine Ref.14 | ||||||
| Modified residue | 519 | 1 | Phosphothreonine Ref.10 | ||||||
Natural variations | |||||||||
| Alternative sequence | 1 – 332 | 332 | Missing in isoform 3. | VSP_037133 | |||||
| Alternative sequence | 304 – 318 | 15 | Missing in isoform 2. Ref.1 | VSP_050627 | |||||
Experimental info | |||||||||
| Sequence conflict | 216 | 1 | L → V in AAC51156. Ref.3 | ||||||
| Sequence conflict | 339 | 1 | L → V in AAC51156. Ref.3 | ||||||
| Sequence conflict | 340 | 1 | A → V in AAC51156. Ref.3 | ||||||
| Sequence conflict | 370 | 1 | P → S in AAC51156. Ref.3 | ||||||
| Sequence conflict | 446 | 1 | F → S in BAG57793. Ref.4 | ||||||
| Sequence conflict | 754 | 1 | M → L in BAG57793. Ref.4 | ||||||
| Sequence conflict | 796 | 1 | S → G in BAG57793. Ref.4 | ||||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "Identification and characterization of a novel human phosphatidylinositol 4-kinase." Suzuki K., Hirano H., Okutomi K., Suzuki M., Kuga Y., Fujiwara T., Kanemoto N., Isono K., Horie M. DNA Res. 4:273-280(1997) [PubMed: 9405935] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1), FUNCTION, SUBCELLULAR LOCATION, TISSUE SPECIFICITY. Tissue: Fetal brain. |
| [2] | "Complementary DNA cloning and chromosomal mapping of a novel phosphatidylinositol kinase gene." Saito T., Seki N., Ishii H., Ohira M., Hayashi A., Kozuma S., Hori T.-A. DNA Res. 4:301-305(1997) [PubMed: 9405938] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1), TISSUE SPECIFICITY. Tissue: Brain. |
| [3] | "Cloning and characterization of a wortmannin-sensitive human phosphatidylinositol 4-kinase." Meyers R., Cantley L.C. J. Biol. Chem. 272:4384-4390(1997) [PubMed: 9020160] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 2), ENZYME REGULATION, TISSUE SPECIFICITY. Tissue: Heart. |
| [4] | "Complete sequencing and characterization of 21,243 full-length human cDNAs." Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S. Sugano S.Nat. Genet. 36:40-45(2004) [PubMed: 14702039] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 3). Tissue: Brain. |
| [5] | "The DNA sequence and biological annotation of human chromosome 1." Gregory S.G., Barlow K.F., McLay K.E., Kaul R., Swarbreck D., Dunham A., Scott C.E., Howe K.L., Woodfine K., Spencer C.C.A., Jones M.C., Gillson C., Searle S., Zhou Y., Kokocinski F., McDonald L., Evans R., Phillips K. Bentley D.R.Nature 441:315-321(2006) [PubMed: 16710414] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [6] | Mural R.J., Istrail S., Sutton G.G., Florea L., Halpern A.L., Mobarry C.M., Lippert R., Walenz B., Shatkay H., Dew I., Miller J.R., Flanigan M.J., Edwards N.J., Bolanos R., Fasulo D., Halldorsson B.V., Hannenhalli S., Turner R. Venter J.C.Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [7] | "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed: 15489334] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 2). Tissue: Brain and Testis. |
| [8] | "Subcellular locations of phosphatidylinositol 4-kinase isoforms." Wong K., Meyers R., Cantley L.C. J. Biol. Chem. 272:13236-13241(1997) [PubMed: 9148941] [Abstract] Cited for: SUBCELLULAR LOCATION. |
| [9] | "ARF mediates recruitment of PtdIns-4-OH kinase-beta and stimulates synthesis of PtdIns(4,5)P2 on the Golgi complex." Godi A., Pertile P., Meyers R., Marra P., Di Tullio G., Iurisci C., Luini A., Corda D., De Matteis M.A. Nat. Cell Biol. 1:280-287(1999) [PubMed: 10559940] [Abstract] Cited for: FUNCTION. |
| [10] | "Human phosphatidylinositol 4-kinase isoform PI4K92. Expression of the recombinant enzyme and determination of multiple phosphorylation sites." Suer S., Sickmann A., Meyer H.E., Herberg F.W., Heilmeyer L.M.G. Jr. Eur. J. Biochem. 268:2099-2106(2001) [PubMed: 11277933] [Abstract] Cited for: PHOSPHORYLATION. |
| [11] | "Mammalian phosphatidylinositol 4-kinases." Heilmeyer L.M.G. Jr., Vereb G. Jr., Vereb G., Kakuk A., Szivak I. IUBMB Life 55:59-65(2003) [PubMed: 12749687] [Abstract] Cited for: FUNCTION. |
| [12] | "Global, in vivo, and site-specific phosphorylation dynamics in signaling networks." Olsen J.V., Blagoev B., Gnad F., Macek B., Kumar C., Mortensen P., Mann M. Cell 127:635-648(2006) [PubMed: 17081983] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-428 AND SER-511, MASS SPECTROMETRY. Tissue: Epithelium. |
| [13] | "Automated phosphoproteome analysis for cultured cancer cells by two-dimensional nanoLC-MS using a calcined titania/C18 biphasic column." Imami K., Sugiyama N., Kyono Y., Tomita M., Ishihama Y. Anal. Sci. 24:161-166(2008) [PubMed: 18187866] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-277, MASS SPECTROMETRY. |
| [14] | "Combining protein-based IMAC, peptide-based IMAC, and MudPIT for efficient phosphoproteomic analysis." Cantin G.T., Yi W., Lu B., Park S.K., Xu T., Lee J.-D., Yates J.R. III J. Proteome Res. 7:1346-1351(2008) [PubMed: 18220336] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-266; SER-511 AND THR-517, MASS SPECTROMETRY. |
| [15] | "A quantitative atlas of mitotic phosphorylation." Dephoure N., Zhou C., Villen J., Beausoleil S.A., Bakalarski C.E., Elledge S.J., Gygi S.P. Proc. Natl. Acad. Sci. U.S.A. 105:10762-10767(2008) [PubMed: 18669648] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-258; THR-263; SER-277; SER-294; SER-428 AND SER-511, MASS SPECTROMETRY. |
| [16] | Colinge J., Superti-Furga G., Bennett K.L. Submitted (OCT-2008) to UniProtKB Cited for: IDENTIFICATION [LARGE SCALE ANALYSIS], MASS SPECTROMETRY. |
Cross-references
Sequence databases | |
|---|---|
| AJ011121 mRNA. Translation: CAA09495.1. AJ011122 mRNA. No translation available. AJ011123 mRNA. Translation: CAA09496.1. AB005910 mRNA. Translation: BAA21661.1. Different initiation. U81802 mRNA. Translation: AAC51156.1. AK294606 mRNA. Translation: BAG57793.1. AL391069 Genomic DNA. Translation: CAH70324.1. AL391069 Genomic DNA. Translation: CAH70325.1. AL391069 Genomic DNA. Translation: CAH70326.1. Sequence problems. CH471121 Genomic DNA. Translation: EAW53449.1. CH471121 Genomic DNA. Translation: EAW53450.1. Sequence problems. BC000029 mRNA. Translation: AAH00029.1. BC040300 mRNA. Translation: AAH40300.1. | |
| IPI | IPI00002591. IPI00165547. |
| PIR | JC5706. |
| RefSeq | NP_002642.1. |
| UniGene | Hs.632465 |
3D structure databases | |
| HSSP | HSSP built from PDB template 1E8Y based on UniProtKB P48736. |
| ModBase | Search... |
Protein-protein interaction databases | |
| IntAct | Q9UBF8. 3 interactions. |
PTM databases | |
| PhosphoSite | Q9UBF8. |
Proteomic databases | |
| PRIDE | Q9UBF8. |
Genome annotation databases | |
| Ensembl | ENSG00000143393. Homo sapiens. [Contig view] |
| GeneID | 5298. |
| KEGG | hsa:5298. |
Organism-specific databases | |
| GeneCards | GC01M149532. |
| H-InvDB | HIX0001056. |
| HGNC | HGNC:8984. PI4KB. |
| HPA | HPA006280. HPA006281. |
| MIM | 602758. gene. |
| PharmGKB | PA33317. |
| GenAtlas | Search... |
Phylogenomic databases | |
| HOVERGEN | Q9UBF8. |
Enzyme and pathway databases | |
| BRENDA | 2.7.1.67. 247. |
| Pathway_Interaction_DB | avb3_integrin_pathway. Integrins in angiogenesis. |
Gene expression databases | |
| ArrayExpress | Q9UBF8. |
| Bgee | Q9UBF8. |
| CleanEx | HS_PI4KB. |
| GermOnline | ENSG00000143393. Homo sapiens. |
Family and domain databases | |
| InterPro | IPR000403. PI3/4_kinase_cat. IPR018936. PI3/4_kinase_CS. IPR015433. PI_Kinase. [Graphical view] |
| Gene3D | G3DSA:1.10.1070.11. PI3/4_kinase_cat. 1 hit. |
| PANTHER | PTHR10048. PI_Kinase. 1 hit. |
| Pfam | PF00454. PI3_PI4_kinase. 1 hit. [Graphical view] |
| SMART | SM00146. PI3Kc. 1 hit. [Graphical view] |
| PROSITE | PS00915. PI3_4_KINASE_1. 1 hit. PS00916. PI3_4_KINASE_2. 1 hit. PS50290. PI3_4_KINASE_3. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Other Resources | |
| NextBio | 20482. |
| PMAP-CutDB | Q9UBF8. |
| SOURCE | Search... |
Entry information
| Entry name | PI4KB_HUMAN | ||||||||
| Accession | Primary (citable) accession number: Q9UBF8 Secondary accession number(s): B4DGI2 Q9BWR6 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation project | HPI (Human Proteome Initiative) | ||||||||
Relevant documents
| Human chromosome 1 Human chromosome 1: entries, gene names and cross-references to MIM |
| MIM cross-references Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot |
| SIMILARITY comments Index of protein domains and families |

Clusters with


