Q9UB28 (Q9UB28_CAEEL) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Myotactin form B EMBL AAD37410.1

Submitted name:
Protein LET-805, isoform b EMBL CCD72391.1

Gene names

Name:	let-805 EMBL CCD72391.1 WormBase WBGene00002915 WormBase H19M22.2b
ORF Names:	H19M22.2 EMBL CCD72391.1 WormBase WBGene00002915

Organism

Caenorhabditis elegans EMBL AAD37410.1

Taxonomic identifier

6239 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Nematoda › Chromadorea › Rhabditida › Rhabditoidea › Rhabditidae › Peloderinae › Caenorhabditis

Protein attributes

Sequence length	4450 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	determination of adult lifespan Inferred from mutant phenotype. Source: WormBase embryo development ending in birth or egg hatching Inferred from mutant phenotype. Source: WormBase locomotion Inferred from mutant phenotype. Source: WormBase molting cycle, collagen and cuticulin-based cuticle Inferred from mutant phenotype. Source: WormBase nematode larval development Inferred from mutant phenotype. Source: WormBase receptor-mediated endocytosis Inferred from mutant phenotype. Source: WormBase reproduction Inferred from mutant phenotype. Source: WormBase
Cellular component	hemidesmosome Inferred from direct assay. Source: WormBase
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q9UB28 [UniParc]. Last modified May 1, 2000. Version 1. Checksum: F69C8FFF7EB0DEA1	FASTA	4,450	497,458
	10 20 30 40 50 60 MGLRSRGLLL LSLGICYLQL FTLANVALNS NVRVKRQSGT DSLLTVEWEG IQTGDHADSE 70 80 90 100 110 120 VKGFLVEYRP ERSGEWQLHP GIIPYKGPNH QYRVQIPKLP TGISYLVRIK VIGENNEVLV 130 140 150 160 170 180 ETPEIRAHNE IVSIKCENDD LTAPRYPQVT EVAQYSLAIK WDAPDCGSVG DYQVELTGVS 190 200 210 220 230 240 APFDIHRQTV TQPHVSVTNL LPGTFYSVKV RAADRSRNVG PWNSEVLEAK TKGDALPISN 250 260 270 280 290 300 NIQLLYRTDS ELRVSWQPFT DPRLQHYEVT AVEVDDDSRR VERRRVDPAL NSFALTGLRP 310 320 330 340 350 360 NTKYTIGVIA FVDHEPKQVY QIEAYTTSGG IESWEEKPQV VDQGKQQFAV HWKLPTTSIT 370 380 390 400 410 420 VSKFILEYRL PNETTWRTSE QKGVADESGD YSVALSQMNA PYYTVRIVAI DDQNKVVART 430 440 450 460 470 480 EELTVGEAAE TSCIGSAGVP TNIRSADVDG QSIKLEWDVP RCDETHTPID GYEYIVYEAS 490 500 510 520 530 540 QSAPVDGASY VGAPHVIIKG LKQNVDYTFK VRSRSVNGHS QWSKDVIIET AVAGSVRSGE 550 560 570 580 590 600 LGEPNQLLRV KRQAKHLIKD SLNIFKLRIV LSPPCSFLVW TPLTQHSQII SKFKLMYKEV 610 620 630 640 650 660 SSSKWIKLIG GMDHFRCPPG IADPEDYCYQ LKGLFFGVHY ISSISYKLTN GEELPSSNPL 670 680 690 700 710 720 HFTLVQLDGS AAPSNERVTL TQPRIEQSAS RSVAYWSVVG DRAAVTEYQV DIRSTDERSW 730 740 750 760 770 780 RAVEPSVQNE QSQTHYRLPL GQLNVASTYL VRVRALDSSR ATVATSPSAS FSVLCQVPSA 790 800 810 820 830 840 PENVRLERVS EQLVRAAWDS SQESGDCQSY FFITGQQNGQ AINQRVPGSD RSVDIAGSSQ 850 860 870 880 890 900 GDWRVQVRGV NTAGSGTPSR DAIFASSAQQ SRRSKRSVCD PRTDFWCKGE FSNSPLREPD 910 920 930 940 950 960 SGEALCSTPR VLAQENDLIV KWKSEGDGRG VYGYHVQFRN ENSGWKTYGQ LVPYVRDNME 970 980 990 1000 1010 1020 YTQTLTGLER GHAYFIHVQV LDRNSYVMYT SAQSSAKSSC SPPTHTPSHL QVAAPDASHV 1030 1040 1050 1060 1070 1080 RVQWALPPQS TWGCSDIQFE IQPEEPRGQP AVVLGSHQTS HIFNSAPNQM WSVKIRAINS 1090 1100 1110 1120 1130 1140 AGHSAWTPAA QTKTPPGGEL IIGPDVSYRQ GKPIISWRSK ENTNDLIESF VLEWKSTTES 1150 1160 1170 1180 1190 1200 SWRQHRNPIP YNGWQRPYSV DLGELPQGHT YQVRIVAKDP NRGNAYTSPV VQVQTQSQCK 1210 1220 1230 1240 1250 1260 APRRAPADVQ VSPLGPTQIR VQWAPLHESE WNCDRLWYIV KHSTPQNQGF KNLTNGENFV 1270 1280 1290 1300 1310 1320 VFDSDPYTQW NFEVQAANPA GESQWSRAQS AQTQGVAPGA VANLRVQPIG PDSLQCSWQP 1330 1340 1350 1360 1370 1380 PVNPNGRITQ YEVTYQLISR GNCDNNQEAP RTITVNGPHF TITGLHPHSK YRVGVAAKSN 1390 1400 1410 1420 1430 1440 VGAGERVSLE IQTDQAAPSG APLYLRTEDI RPTDVSISWQ APPCLQTNGE ITEYEYEVTA 1450 1460 1470 1480 1490 1500 GDRRQTVQKT TENIRGTRAK IENLQPQTRY NVKVRAYTAR GAGPWSTEVP FQTSAGQQNV 1510 1520 1530 1540 1550 1560 QAPGFVKVLH TGADNAQLVW QSPYPNPGYV DKYKCRYAPS GTQQYQERQF PAVSPCQQRQ 1570 1580 1590 1600 1610 1620 IERQNLPQSP PGSRLHCGRI ENLRPEQTYD FQVSAHVKDS GWGPYSPPER TKVTESAVQV 1630 1640 1650 1660 1670 1680 LFVKKIGGSE NSLHINWDVR PDDKNRVTAF RITVVPQDGS QRSQTFNVDR ATYQYRIDNL 1690 1700 1710 1720 1730 1740 RPRTTYNVTV SAATHKEMCG GTAAVMTTDA AALTALSTAP RVIAEEPTSI TIEWESRNRE 1750 1760 1770 1780 1790 1800 AGGFIVEYRL EGGAWQQYAR RIPAHPSQTT YTATVDGLPT NAVVDLRVRV VSQQNEQSNP 1810 1820 1830 1840 1850 1860 SPEVRARTKC SPPTSPPQGV RVDAPSTNEV RVSWARPAKN TWMCDQMNVE ISYRVGNQPE 1870 1880 1890 1900 1910 1920 KVLTVPGDQT EYTFPAEPNQ RWVVKLRATN QVGSSQWSPE QSITTRQGAP GSVRDLRVKA 1930 1940 1950 1960 1970 1980 LSPNEVHVQW LAPLVQRGTI VGYDISYRLK HRLACPEEEP RDVSRDFVTV YNHKDLDYTI 1990 2000 2010 2020 2030 2040 TGLLPYSLYE VRVRARTTEL GPEETKEVST EQQPPSSPPL NLESTYALER SLSFQWEPVD 2050 2060 2070 2080 2090 2100 CSQRHGHVVN YEYEILGQDD WAKLERQIAN TSDLRVTIDG LTPYTKYVMR VKAYNSIGGG 2110 2120 2130 2140 2150 2160 PNTENLVVMT AKAQAPLPPQ DLVVAQEGTS FFMVSWLPPY PPYGPHDAYK IRYQQIPSDD 2170 2180 2190 2200 2210 2220 WKEVEKGIKD PLLQCPGESP RFCYNATGLD SGQQFKIQVA TRIEGGSYGP WSSLVIANTL 2230 2240 2250 2260 2270 2280 QVLPDAPRAI HLIEKTDHSL HIRWVPPIDP KGYVTQYRVS IVSLDDVNDK KRTHIVNHPT 2290 2300 2310 2320 2330 2340 LTYLFEELNP ETSYNISISA GTKQGFGREI WTRYTTDPFN IPVVGTMPTV TPDGANALDV 2350 2360 2370 2380 2390 2400 QWNAVLDPKN RVKGYIIEIR NSDTPVWQEI GGVTNHDAGK STYFKKLTGL DSDTLYFIRI 2410 2420 2430 2440 2450 2460 KVVDQRQRVG VPSPEAQART GCAAPLSPPT NLNLASPSNV QVRVSWQAPN QNSWKCSAIR 2470 2480 2490 2500 2510 2520 YKLEYINGTE GRKQIDLPSS SIEHLFDSKS NTKWTVRIRT ENDAGSSEWS KELSITTSEG 2530 2540 2550 2560 2570 2580 APGPVEGLTA KPTGPTSIVA RWKPPRDPNG VITGYTLTYQ LKSIGECGPR SSTPIEKHVK 2590 2600 2610 2620 2630 2640 NEEETLEGLL PDSTYEIHVV AHTSHAGPQS SVVTVTTEEA APTGPPQNVR AGSVTSSRAD 2650 2660 2670 2680 2690 2700 ITWTQPECEQ RNGKITDYEY ELWSMDTWAD NSTGHNPTER LNLDQLIPYT QYQIRVRAIN 2710 2720 2730 2740 2750 2760 KEGDGPFSEW VPFTTSATNP PAPSDLQEEA TFPHAIEISW LPPTPPHGNI DFYKVRYTPS 2770 2780 2790 2800 2810 2820 GEANYREIRV ETDRLECSDS NKKDRLCYRL SDLDPEQEYD IQVSAHTEGG GWSEWSDELT 2830 2840 2850 2860 2870 2880 SRTQQQNIPV LERELEVTDK TSNSISLKWE GLPQDQATHV VGYVLEFKSE DDNAEWQEYN 2890 2900 2910 2920 2930 2940 GVVKHRKTSS DYKITVKQLE TATLYFFRLR VVGKNDKRGQ PGPETKETTS CGKPEAPPES 2950 2960 2970 2980 2990 3000 LKLESLDFET LKITWTPPEE STWRCDNVEY LIDFVNTTSR GNWTVSTDAP SELIVPTQPG 3010 3020 3030 3040 3050 3060 TKWDVKIRTQ TVEDSGKPQA SRWSDRVSIT TQSLPGEIFV TVEPKGPREA LVTWELPDKD 3070 3080 3090 3100 3110 3120 QKWNYGVDIT YKLKQLGGCN EVQTGAKEPV TLLNVQEKQI PLENLQPGSL YEVSVTPRRP 3130 3140 3150 3160 3170 3180 PSLHSSIVTP KTVRTFRTKN DVPTGPPQNL QSTVRKDSEL GFKWDAPECI QQNGNITQYE 3190 3200 3210 3220 3230 3240 FELVGLDEWN EGTREGVTPR QNTLIDQLQP GSLYRIKVRA YTAEGPGPWS DSLEIRTTGS 3250 3260 3270 3280 3290 3300 ELGPPRELTA VQTKATQIQL TWLPPYPEKA IVTAYRIRYS PRADDSNPTE VELSGDDLTC 3310 3320 3330 3340 3350 3360 SGYKSPIITS ANLCATIKGL QPSTTYRFAV QGQSSSGNWG EWSSDYFSTT RNDDNELLGG 3370 3380 3390 3400 3410 3420 SLKLLSAGHD NLKVKWTPPA VIGEKIDKYD IFISVASVLD QNPKKFDVNG QTTDYHFRHL 3430 3440 3450 3460 3470 3480 DSVTQYNVTV QGTSEGNKLW FISSVFSTTD FAEGLLNWLP APTDLHLIEK SDTMLHVDWV 3490 3500 3510 3520 3530 3540 PPEIFDPEQR ELITHHRVTI APFDPTTGKT GPSKNYTVPY PGNSIKFEGL RPETIYNITV 3550 3560 3570 3580 3590 3600 QAGTNSGYGH ILWGTYSTLA PGQRHILRLL NRTPTTLNVA WEPVWGRSHS GYTLTARTLY 3610 3620 3630 3640 3650 3660 SVYGNVRLQQ IKTFDVDASE TEFVIRGLHP STVYNVTLTP KDHNEVAWGA YATLPPGWFV 3670 3680 3690 3700 3710 3720 VKNLKQCDKT DFAVSMSWEP VELDMASDYQ VRYLRLKEHD GIWTEEEARP AKELLCPKDG 3730 3740 3750 3760 3770 3780 CGRLCYLVFN LPHNPTEYVF QVRAKVDGEW NHWKSAPKKM TSSEPLSIRR SCCIVPPPYF 3790 3800 3810 3820 3830 3840 VDNIGAPGTF WEVDVNPAAT ENNVTRYYVV VDERDPPGDT NWTELTDKVT ANKMKIPYYV 3850 3860 3870 3880 3890 3900 AASFNLETLP EPRKVRIGDG SVIGGYLNYP LVKGKKYNYE VYTIWNVTGA PLVGRLRASP 3910 3920 3930 3940 3950 3960 YITSSWPWWW LLLPLLAALL LTLLCCCIPW CLKRRYRSSK EHSRLVTNGQ HAPLLEEQKA 3970 3980 3990 4000 4010 4020 GMNENMRQLE TRLDKMRGAV DGRARGDFED GYMKGYKDAN KLGSAHAARR RLDDDYGTRD 4030 4040 4050 4060 4070 4080 DRFHEGYVKG LKDAGMTGMT TSMHNLAQRT GGGYSAGFAQ GYKDGNSGIF GDRVTPSLIS 4090 4100 4110 4120 4130 4140 RLDEQYAGQE DFKQGYVDGF KEGASSRVGE RSRFEDSRKL QQSLTELTER LTSLEKTKGD 4150 4160 4170 4180 4190 4200 EIHSTKIYHV YNQQPEGATM SSTGAQLAQE LEEIGSTSRR STLRRHYTPG DYLKQDAEEG 4210 4220 4230 4240 4250 4260 YNSLSRNRRS LSASALAANR EAAHQSSSYL QTGGTLSRSR HHMSHAGSSY LSRAAQDAQV 4270 4280 4290 4300 4310 4320 GGTDTYAKRY NYRSRSDVGS PRRYASQTLL DGSRPGPSTP HAKRDALHTL TKELDSLSRS 4330 4340 4350 4360 4370 4380 PDVRGSTPRG TTGYGSDNNA YDTVRSRARG YSNYDYDTFQ SSRNVTNSSS AAAAASGAQT 4390 4400 4410 4420 4430 4440 TGATAASSSS ATQQDKSGKW AEQLIDLVSE PLDTTIARIN NYTSSSNDRG QGDVVEEKYH 4450 RSYKEEHSSR

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Genome sequence of the nematode C. elegans: a platform for investigating biology." Caenorhabditis elegans Sequencing Consortium Science 282:2012-2018(1998) Cited for: NUCLEOTIDE SEQUENCE. Strain: Bristol N2 EMBL CCD72391.1.
[2]	"Genome sequence of the nematode C. elegans: a platform for investigating biology." The C. elegans sequencing consortium Science 282:2012-2018(1998) [PubMed: 9851916] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Bristol N2.
[3]	WormBase Consortium Wilson R., Wamsley P. Submitted (SEP-1999) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: Bristol N2 EMBL CCD72391.1.
[4]	"Myotactin, a novel cell-adhesion protein associated with hemidesmosome-like structures in Caenorhabditis elegans." Hresko M.C., Schriefer L.A., Shrimankar P., Waterston R.H. Submitted (MAY-1999) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: N2 EMBL AAD37410.1.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AF148953 mRNA. Translation: AAD37410.1. FO081555 Genomic DNA. Translation: CCD72391.1.
PIR	C88400. T32828.
RefSeq	NP_001022641.1. NM_001027470.1.
UniGene	Cel.19573.
3D structure databases
HSSP	HSSP built from PDB template 1TTF based on UniProtKB Q96KP7.
ProteinModelPortal	Q9UB28.
SMR	Q9UB28. Positions 143-221, 429-525, 742-814, 1204-1489, 2028-2158, 2223-2259, 2282-2821, 3097-3348, 3362-3435, 3523-3553.
ModBase	Search...
Protein-protein interaction databases
IntAct	Q9UB28. 1 interaction.
MINT	MINT-1115902.
Proteomic databases
PRIDE	Q9UB28.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblMetazoa	H19M22.2b; H19M22.2b; H19M22.2.
GeneID	175384.
KEGG	cel:H19M22.2.
UCSC	H19M22.2d. c. elegans.
Organism-specific databases
CTD	175384.
WormBase	H19M22.2b; CE26977; WBGene00002915; let-805.
Phylogenomic databases
GeneTree	EMGT00050000003180.
HOGENOM	HBG383007.
InParanoid	Q9UB28.
OMA	GHFDFFT.
PhylomeDB	Q9UB28.
Gene expression databases
ArrayExpress	Q9UB28.
Family and domain databases
InterPro	IPR003961. Fibronectin_type3. IPR013783. Ig-like_fold. [Graphical view]
Gene3D	G3DSA:2.60.40.10. Ig-like_fold. 33 hits.
Pfam	PF00041. fn3. 24 hits. [Graphical view]
SMART	SM00060. FN3. 35 hits. [Graphical view]
SUPFAM	SSF49265. FN_III-like. 30 hits.
PROSITE	PS50853. FN3. 35 hits. [Graphical view]
ProtoNet	Search...
Other
NextBio	887930.

Entry information

Entry name

Q9UB28_CAEEL

Accession

Primary (citable) accession number: Q9UB28

Entry history

Integrated into UniProtKB/TrEMBL:	May 1, 2000
Last sequence update:	May 1, 2000
Last modified:	January 25, 2012
This is version 96 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)