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Q9UB00 (Q9UB00_CAEEL) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 69. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
ORF Names:Y4C6B.6 EMBL CCD71128.1 WormBase Y4C6B.6
OrganismCaenorhabditis elegans
Taxonomic identifier6239 [NCBI]
Taxonomic lineageEukaryotaMetazoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis

Protein attributes

Sequence length519 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

Sequences

Sequence LengthMass (Da)Tools
Q9UB00 [UniParc].

Last modified October 1, 2001. Version 2.
Checksum: FD822081D820C80A

FASTA51958,247
        10         20         30         40         50         60 
MILNISVSLL IFLAFYGFSS DAKSLPCSEV KKEYGIVCRC NATYCDTIEP LGTVTSGKAV 

        70         80         90        100        110        120 
VYTTSRNGKR MNRSELKHTT SSTAKTKVYV NTTQSFQPVM GFGAAFTDAA GINMKMLPQT 

       130        140        150        160        170        180 
MQDQIIQQYF SDDGLGYVFG RVPMASTDFS THEYSYDDVK FDFDLKNFNL TVEDLQYKIP 

       190        200        210        220        230        240 
FIKKAMTASG GKLKLFATPW SSPGWMKTSG RMVGAGELLG DQNGKYYQTW AQYFVKFFEA 

       250        260        270        280        290        300 
YHAQGIDFWS LTPQNEPTTG IDPLWKWQTL FFDASMERNF IKKLLGPALA SSPVTKNLKI 

       310        320        330        340        350        360 
MINDDQRINL PHWPNVILTD PTAAQYVHGI AIHWYEDFID PATVLTETHE KFPDYFLLAT 

       370        380        390        400        410        420 
EACAGYFPAD GPKLGSWSRA EQYANDLIKD MGNWVGGWVD WNYILDLQGG PNLAKNFVDS 

       430        440        450        460        470        480 
TIIVNATAQE YYKQPIWHVM AQFSKFVKPG AIRVGINIIE KSVDVEGLSF LNQDGTKTVV 

       490        500        510 
LLNKNEVLSF DVAISDVSAP NVIYDLTIQP NSLITIVYK 

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References

[1]"Genome sequence of the nematode C. elegans: a platform for investigating biology."
The C. elegans sequencing consortium
Science 282:2012-2018(1998) [PubMed: 9851916] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Bristol N2.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
FO081369 Genomic DNA. Translation: CCD71128.1.
PIRT34017.
RefSeqNP_500785.1. NM_068384.3.
UniGeneCel.7806.

3D structure databases

HSSPHSSP built from PDB template 1OGS based on UniProtKB P04062.
ProteinModelPortalQ9UB00.
SMRQ9UB00. Positions 23-519.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ9UB00.

Protein family/group databases

CAZyGH30. Glycoside Hydrolase Family 30.

Proteomic databases

PRIDEQ9UB00.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaY4C6B.6; Y4C6B.6; Y4C6B.6.
GeneID177314.
KEGGcel:Y4C6B.6.
NMPDRfig|6239.3.peg.13390.
UCSCY4C6B.6. c. elegans.

Organism-specific databases

CTD177314.
WormBaseY4C6B.6; CE28522; WBGene00021160.

Phylogenomic databases

eggNOGmeNOG07000.
GeneTreeEMGT00050000006005.
HOGENOMHBG380604.
InParanoidQ9UB00.
OMAWSAPAFM.
PhylomeDBQ9UB00.

Gene expression databases

ArrayExpressQ9UB00.

Family and domain databases

InterProIPR013780. Glyco_hydro_13_b.
IPR001139. Glyco_hydro_30.
IPR013781. Glyco_hydro_subgr_catalytic.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
Gene3DG3DSA:2.60.40.1180. Glyco_hydro_13_b. 1 hit.
G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
KOK01201.
PANTHERPTHR11069. Glyco_hydro_30. 1 hit.
PfamPF02055. Glyco_hydro_30. 1 hit.
[Graphical view]
PRINTSPR00843. GLHYDRLASE30.
SUPFAMSSF51445. Glyco_hydro_cat. 1 hit.
ProtoNetSearch...

Other

NextBio896226.

Entry information

Entry nameQ9UB00_CAEEL
AccessionPrimary (citable) accession number: Q9UB00
Entry history
Integrated into UniProtKB/TrEMBL: May 1, 2000
Last sequence update: October 1, 2001
Last modified: January 25, 2012
This is version 69 of the entry and version 2 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)