Q9UB00 (Q9UB00_CAEEL) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Protein Y4C6B.6 EMBL CCD71128.1

Gene names

ORF Names:

Y4C6B.6 EMBL CCD71128.1 WormBase Y4C6B.6

Organism

Caenorhabditis elegans

Taxonomic identifier

6239 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Nematoda › Chromadorea › Rhabditida › Rhabditoidea › Rhabditidae › Peloderinae › Caenorhabditis

Protein attributes

Sequence length	519 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro lysosome organization Inferred from electronic annotation. Source: InterPro sphingolipid metabolic process Inferred from electronic annotation. Source: InterPro
Cellular component	lysosome Inferred from electronic annotation. Source: InterPro
Molecular function	cation binding Inferred from electronic annotation. Source: InterPro glucosylceramidase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q9UB00 [UniParc]. Last modified October 1, 2001. Version 2. Checksum: FD822081D820C80A	FASTA	519	58,247
	10 20 30 40 50 60 MILNISVSLL IFLAFYGFSS DAKSLPCSEV KKEYGIVCRC NATYCDTIEP LGTVTSGKAV 70 80 90 100 110 120 VYTTSRNGKR MNRSELKHTT SSTAKTKVYV NTTQSFQPVM GFGAAFTDAA GINMKMLPQT 130 140 150 160 170 180 MQDQIIQQYF SDDGLGYVFG RVPMASTDFS THEYSYDDVK FDFDLKNFNL TVEDLQYKIP 190 200 210 220 230 240 FIKKAMTASG GKLKLFATPW SSPGWMKTSG RMVGAGELLG DQNGKYYQTW AQYFVKFFEA 250 260 270 280 290 300 YHAQGIDFWS LTPQNEPTTG IDPLWKWQTL FFDASMERNF IKKLLGPALA SSPVTKNLKI 310 320 330 340 350 360 MINDDQRINL PHWPNVILTD PTAAQYVHGI AIHWYEDFID PATVLTETHE KFPDYFLLAT 370 380 390 400 410 420 EACAGYFPAD GPKLGSWSRA EQYANDLIKD MGNWVGGWVD WNYILDLQGG PNLAKNFVDS 430 440 450 460 470 480 TIIVNATAQE YYKQPIWHVM AQFSKFVKPG AIRVGINIIE KSVDVEGLSF LNQDGTKTVV 490 500 510 LLNKNEVLSF DVAISDVSAP NVIYDLTIQP NSLITIVYK

References

[1]	"Genome sequence of the nematode C. elegans: a platform for investigating biology." The C. elegans sequencing consortium Science 282:2012-2018(1998) [PubMed: 9851916] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Bristol N2.

Cross-references

Sequence databases
EMBL GenBank DDBJ	FO081369 Genomic DNA. Translation: CCD71128.1.
PIR	T34017.
RefSeq	NP_500785.1. NM_068384.3.
UniGene	Cel.7806.
3D structure databases
HSSP	HSSP built from PDB template 1OGS based on UniProtKB P04062.
ProteinModelPortal	Q9UB00.
SMR	Q9UB00. Positions 23-519.
ModBase	Search...
Protein-protein interaction databases
STRING	Q9UB00.
Protein family/group databases
CAZy	GH30. Glycoside Hydrolase Family 30.
Proteomic databases
PRIDE	Q9UB00.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblMetazoa	Y4C6B.6; Y4C6B.6; Y4C6B.6.
GeneID	177314.
KEGG	cel:Y4C6B.6.
NMPDR	fig|6239.3.peg.13390.
UCSC	Y4C6B.6. c. elegans.
Organism-specific databases
CTD	177314.
WormBase	Y4C6B.6; CE28522; WBGene00021160.
Phylogenomic databases
eggNOG	meNOG07000.
GeneTree	EMGT00050000006005.
HOGENOM	HBG380604.
InParanoid	Q9UB00.
OMA	WSAPAFM.
PhylomeDB	Q9UB00.
Gene expression databases
ArrayExpress	Q9UB00.
Family and domain databases
InterPro	IPR013780. Glyco_hydro_13_b. IPR001139. Glyco_hydro_30. IPR013781. Glyco_hydro_subgr_catalytic. IPR017853. Glycoside_hydrolase_SF. [Graphical view]
Gene3D	G3DSA:2.60.40.1180. Glyco_hydro_13_b. 1 hit. G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
KO	K01201.
PANTHER	PTHR11069. Glyco_hydro_30. 1 hit.
Pfam	PF02055. Glyco_hydro_30. 1 hit. [Graphical view]
PRINTS	PR00843. GLHYDRLASE30.
SUPFAM	SSF51445. Glyco_hydro_cat. 1 hit.
ProtoNet	Search...
Other
NextBio	896226.

Entry information

Entry name

Q9UB00_CAEEL

Accession

Primary (citable) accession number: Q9UB00

Entry history

Integrated into UniProtKB/TrEMBL:	May 1, 2000
Last sequence update:	October 1, 2001
Last modified:	January 25, 2012
This is version 69 of the entry and version 2 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)