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Q9U304 (Q9U304_CAEEL) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 74. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
ORF Names:Y106G6D.7 EMBL CAA20980.2 WormBase Y106G6D.7
OrganismCaenorhabditis elegans
Taxonomic identifier6239 [NCBI]
Taxonomic lineageEukaryotaMetazoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis

Protein attributes

Sequence length948 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

Ontologies

Sequences

Sequence LengthMass (Da)Tools
Q9U304 [UniParc].

Last modified May 1, 2000. Version 1.
Checksum: 8AFEFEE5E6F5C2D7

FASTA948104,274
        10         20         30         40         50         60 
MSVIIRLKNL PMTAGASDVR TFFTGLKIPD GAVHIIGGDE GEVFVGFSSD DDARLAMTKD 

        70         80         90        100        110        120 
RLMIHGAEVR LFLSSKSEQN SVIAARKNNT YTSPVYKEYV PPVPSQPTPA QEQNWNSQTA 

       130        140        150        160        170        180 
GNPYAAKAGY EASYPPQNSN ATRTSFNNQN SYSNRQEISQ NHQENSVKLK DPFGGDYGGY 

       190        200        210        220        230        240 
KFQQQPPPQI NRYGSGPPPS KPADLSNTRS LPPVNNPPPP HPIPQFPPEK QFGNKLGNNN 

       250        260        270        280        290        300 
DVSSRENHIQ GSGNERVQGG DSWRDTSFNQ PPRNDFKGNY NNAYSSNKYK NNYKAPEFNN 

       310        320        330        340        350        360 
DFNGGNKFNQ FPPRNAQSTD LSENRAAPPQ TGRKTLMPTP QAPFQNAPAP FTNGPSDDVN 

       370        380        390        400        410        420 
RPFQTGPPGN LGRNGPPPFQ AGVPPPVIQN NMGRPIAPPA AMVRPPPQNF PGGAGGALPV 

       430        440        450        460        470        480 
FQAPVMTPIV PPVNKPMGAA AVEKFYIELT RLPTDLLRPA ALEAFIHPTA PLTLSSVKTV 

       490        500        510        520        530        540 
FGPGGIHMHT IIRLDSIADY ATMMRRNGEQ GIKIQQSDKK SFDTAIDGIP IPSVSMVPSK 

       550        560        570        580        590        600 
EQRSHEDDDK KSRRSRWENT SPIRSPRRSP LRRDNRDRSR SRSPPRRRRR SRSPRRREEH 

       610        620        630        640        650        660 
TDPTRWCVQV TNVPFRMKDE ELLEWFSEKV RPAKLTRTFY SDGNASDRWV AEFSSESLMK 

       670        680        690        700        710        720 
RSFGIRTLCT GRTLRLRYID NAKADEILKI EDVYGEGKRQ MNEEARLQHE VAEKANPPSF 

       730        740        750        760        770        780 
FNAPAATRGS GPMPPLNGTA PLPSGQQNGM NVPPPNGFNG APMRGGFVPR GGNNFSQSRG 

       790        800        810        820        830        840 
GMMGRGGHGG GGGPQNFYQN GPNNFNNGPP EQQGQFRGNQ GNDGGFRGGF RGGYRGRGGG 

       850        860        870        880        890        900 
RGGFQGGSRG DDSQPSQSEL MELIKSIGPR GTVLSCNGFP KDVTLEDVVE FFNDYEPDRN 

       910        920        930        940 
SIRIRRGDDG VMTGECMLAC QNQENARRAS MDLDGQKLRN SVISVRII 

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References

[1]"Genome sequence of the nematode C. elegans: a platform for investigating biology."
The C. elegans sequencing consortium
Science 282:2012-2018(1998) [PubMed: 9851916] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Bristol N2.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AL031629 Genomic DNA. Translation: CAA20980.2.
PIRB87957.
T26417.
RefSeqNP_492671.1. NM_060270.3.
UniGeneCel.22654.

3D structure databases

ProteinModelPortalQ9U304.
SMRQ9U304. Positions 3-80, 605-679, 871-948.
ModBaseSearch...

Protein-protein interaction databases

DIPDIP-26480N.
IntActQ9U304. 7 interactions.
MINTMINT-1041092.
STRINGQ9U304.

Proteomic databases

PRIDEQ9U304.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaY106G6D.7; Y106G6D.7; Y106G6D.7.
GeneID172878.
KEGGcel:Y106G6D.7.
UCSCY106G6D.7. c. elegans.

Organism-specific databases

CTD172878.
WormBaseY106G6D.7; CE24110; WBGene00013703.

Phylogenomic databases

eggNOGmeNOG13105.
GeneTreeEMGT00050000002962.
HOGENOMHBG377917.
InParanoidQ9U304.
OMAYEASYPP.

Gene expression databases

ArrayExpressQ9U304.

Family and domain databases

InterProIPR012677. Nucleotide-bd_a/b_plait.
IPR000504. RRM_dom.
[Graphical view]
Gene3DG3DSA:3.30.70.330. a_b_plait_nuc_bd. 1 hit.
PfamPF00076. RRM_1. 1 hit.
[Graphical view]
SMARTSM00360. RRM. 2 hits.
[Graphical view]
ProtoNetSearch...

Other

NextBio877371.

Entry information

Entry nameQ9U304_CAEEL
AccessionPrimary (citable) accession number: Q9U304
Entry history
Integrated into UniProtKB/TrEMBL: May 1, 2000
Last sequence update: May 1, 2000
Last modified: January 25, 2012
This is version 74 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)