Unreviewed, UniProtKB/TrEMBL Q9U304 (Q9U304_CAEEL)

Names and origin

Protein names

Submitted name:
    Protein Y106G6D.7, partially confirmed by transcript evidence EMBL CAA20980.2

Gene names

ORF Names:

Y106G6D.7 EMBL CAA20980.2

Organism

Caenorhabditis elegans [Complete proteome]

Taxonomic identifier

6239 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Nematoda › Chromadorea › Rhabditida › Rhabditoidea › Rhabditidae › Peloderinae › Caenorhabditis

Protein attributes

Sequence length	948 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Evidence at protein level.

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Molecular function	nucleic acid binding Inferred from electronic annotation. Source: InterPro nucleotide binding Inferred from electronic annotation. Source: InterPro protein binding Inferred from physical interaction. Source: IntAct
Complete GO annotation...

Binary interactions

With	Entry	#Exp.	IntAct	Notes
atn-1	Q23158	1	EBI-329038,EBI-314014

Sequences

	Sequence		Length	Mass (Da)
	Q9U304-1 [UniParc]. Last modified May 1, 2000. Version 1. Checksum: 8AFEFEE5E6F5C2D7	FASTA	948	104,274
	10 20 30 40 50 60 MSVIIRLKNL PMTAGASDVR TFFTGLKIPD GAVHIIGGDE GEVFVGFSSD DDARLAMTKD 70 80 90 100 110 120 RLMIHGAEVR LFLSSKSEQN SVIAARKNNT YTSPVYKEYV PPVPSQPTPA QEQNWNSQTA 130 140 150 160 170 180 GNPYAAKAGY EASYPPQNSN ATRTSFNNQN SYSNRQEISQ NHQENSVKLK DPFGGDYGGY 190 200 210 220 230 240 KFQQQPPPQI NRYGSGPPPS KPADLSNTRS LPPVNNPPPP HPIPQFPPEK QFGNKLGNNN 250 260 270 280 290 300 DVSSRENHIQ GSGNERVQGG DSWRDTSFNQ PPRNDFKGNY NNAYSSNKYK NNYKAPEFNN 310 320 330 340 350 360 DFNGGNKFNQ FPPRNAQSTD LSENRAAPPQ TGRKTLMPTP QAPFQNAPAP FTNGPSDDVN 370 380 390 400 410 420 RPFQTGPPGN LGRNGPPPFQ AGVPPPVIQN NMGRPIAPPA AMVRPPPQNF PGGAGGALPV 430 440 450 460 470 480 FQAPVMTPIV PPVNKPMGAA AVEKFYIELT RLPTDLLRPA ALEAFIHPTA PLTLSSVKTV 490 500 510 520 530 540 FGPGGIHMHT IIRLDSIADY ATMMRRNGEQ GIKIQQSDKK SFDTAIDGIP IPSVSMVPSK 550 560 570 580 590 600 EQRSHEDDDK KSRRSRWENT SPIRSPRRSP LRRDNRDRSR SRSPPRRRRR SRSPRRREEH 610 620 630 640 650 660 TDPTRWCVQV TNVPFRMKDE ELLEWFSEKV RPAKLTRTFY SDGNASDRWV AEFSSESLMK 670 680 690 700 710 720 RSFGIRTLCT GRTLRLRYID NAKADEILKI EDVYGEGKRQ MNEEARLQHE VAEKANPPSF 730 740 750 760 770 780 FNAPAATRGS GPMPPLNGTA PLPSGQQNGM NVPPPNGFNG APMRGGFVPR GGNNFSQSRG 790 800 810 820 830 840 GMMGRGGHGG GGGPQNFYQN GPNNFNNGPP EQQGQFRGNQ GNDGGFRGGF RGGYRGRGGG 850 860 870 880 890 900 RGGFQGGSRG DDSQPSQSEL MELIKSIGPR GTVLSCNGFP KDVTLEDVVE FFNDYEPDRN 910 920 930 940 SIRIRRGDDG VMTGECMLAC QNQENARRAS MDLDGQKLRN SVISVRII

References

[1]	"Genome sequence of the nematode C. elegans: a platform for investigating biology." The C. elegans sequencing consortium Science 282:2012-2018(1998) [PubMed: 9851916] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Bristol N2.

Cross-references

Sequence databases
EMBLGenBankDDBJ	AL031629 Genomic DNA. Translation: CAA20980.2.
PIR	B87957. T26417.
RefSeq	NP_492671.1.
UniGene	Cel.22654
3D structure databases
ModBase	Search...
Protein-protein interaction databases
DIP	DIP:26480N.
IntAct	Q9U304. 1 interaction.
Genome annotation databases
Ensembl	Y106G6D.7. Caenorhabditis elegans. [Contig view]
GeneID	172878.
KEGG	cel:Y106G6D.7.
Organism-specific databases
WormBase	WBGene00013703. Y106G6D.7.
WormPep	Y106G6D.7. CE24110. [WorfDB]
Phylogenomic databases
OMA	Q9U304. NSIRIRR.
Gene expression databases
ArrayExpress	Q9U304.
Family and domain databases
InterPro	IPR012677. a_b_plait_nuc_bd. IPR000504. RRM_RNP1. [Graphical view]
Gene3D	G3DSA:3.30.70.330. a_b_plait_nuc_bd. 1 hit.
Pfam	PF00076. RRM_1. 1 hit. [Graphical view]
SMART	SM00360. RRM. 2 hits. [Graphical view]
ProtoNet	Search...
Other Resources
NextBio	877371.

Entry information

Entry name

Q9U304_CAEEL

Accession

Primary (citable) accession number: Q9U304

Entry history

Integrated into UniProtKB/TrEMBL:	May 1, 2000
Last sequence update:	May 1, 2000
Last modified:	May 5, 2009
This is version 58 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)