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Protein
Submitted name:

Uncharacterized protein

Gene

CELE_Y106G6D.7

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
ORF Names:CELE_Y106G6D.7Imported, Y106G6D.7Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome I

Organism-specific databases

WormBaseiY106G6D.7; CE24110; WBGene00013703.

PTM / Processingi

Proteomic databases

EPDiQ9U304.
PaxDbiQ9U304.
PeptideAtlasiQ9U304.

Expressioni

Gene expression databases

BgeeiWBGene00013703.

Interactioni

Protein-protein interaction databases

DIPiDIP-26480N.
IntActiQ9U304. 13 interactors.
MINTiMINT-1041092.
STRINGi6239.Y106G6D.7.

Structurei

3D structure databases

ProteinModelPortaliQ9U304.
SMRiQ9U304.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini4 – 72RRM (RNA recognition motif)InterPro annotationAdd BLAST69
Domaini873 – 946RRM (RNA recognition motif)InterPro annotationAdd BLAST74

Phylogenomic databases

eggNOGiKOG4307. Eukaryota.
ENOG410ZN03. LUCA.
GeneTreeiENSGT00760000119102.
HOGENOMiHOG000019591.
InParanoidiQ9U304.
OMAiDRWIAEF.
OrthoDBiEOG091G06A4.

Family and domain databases

InterProiView protein in InterPro
IPR000504. RRM_dom.
PfamiView protein in Pfam
PF00076. RRM_1. 1 hit.
SMARTiView protein in SMART
SM00360. RRM. 2 hits.
SUPFAMiSSF54928. SSF54928. 3 hits.

Sequencei

Sequence statusi: Complete.

Q9U304-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSVIIRLKNL PMTAGASDVR TFFTGLKIPD GAVHIIGGDE GEVFVGFSSD
60 70 80 90 100
DDARLAMTKD RLMIHGAEVR LFLSSKSEQN SVIAARKNNT YTSPVYKEYV
110 120 130 140 150
PPVPSQPTPA QEQNWNSQTA GNPYAAKAGY EASYPPQNSN ATRTSFNNQN
160 170 180 190 200
SYSNRQEISQ NHQENSVKLK DPFGGDYGGY KFQQQPPPQI NRYGSGPPPS
210 220 230 240 250
KPADLSNTRS LPPVNNPPPP HPIPQFPPEK QFGNKLGNNN DVSSRENHIQ
260 270 280 290 300
GSGNERVQGG DSWRDTSFNQ PPRNDFKGNY NNAYSSNKYK NNYKAPEFNN
310 320 330 340 350
DFNGGNKFNQ FPPRNAQSTD LSENRAAPPQ TGRKTLMPTP QAPFQNAPAP
360 370 380 390 400
FTNGPSDDVN RPFQTGPPGN LGRNGPPPFQ AGVPPPVIQN NMGRPIAPPA
410 420 430 440 450
AMVRPPPQNF PGGAGGALPV FQAPVMTPIV PPVNKPMGAA AVEKFYIELT
460 470 480 490 500
RLPTDLLRPA ALEAFIHPTA PLTLSSVKTV FGPGGIHMHT IIRLDSIADY
510 520 530 540 550
ATMMRRNGEQ GIKIQQSDKK SFDTAIDGIP IPSVSMVPSK EQRSHEDDDK
560 570 580 590 600
KSRRSRWENT SPIRSPRRSP LRRDNRDRSR SRSPPRRRRR SRSPRRREEH
610 620 630 640 650
TDPTRWCVQV TNVPFRMKDE ELLEWFSEKV RPAKLTRTFY SDGNASDRWV
660 670 680 690 700
AEFSSESLMK RSFGIRTLCT GRTLRLRYID NAKADEILKI EDVYGEGKRQ
710 720 730 740 750
MNEEARLQHE VAEKANPPSF FNAPAATRGS GPMPPLNGTA PLPSGQQNGM
760 770 780 790 800
NVPPPNGFNG APMRGGFVPR GGNNFSQSRG GMMGRGGHGG GGGPQNFYQN
810 820 830 840 850
GPNNFNNGPP EQQGQFRGNQ GNDGGFRGGF RGGYRGRGGG RGGFQGGSRG
860 870 880 890 900
DDSQPSQSEL MELIKSIGPR GTVLSCNGFP KDVTLEDVVE FFNDYEPDRN
910 920 930 940
SIRIRRGDDG VMTGECMLAC QNQENARRAS MDLDGQKLRN SVISVRII
Length:948
Mass (Da):104,274
Last modified:May 1, 2000 - v1
Checksum:i8AFEFEE5E6F5C2D7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284601 Genomic DNA. Translation: CAA20980.2.
PIRiB87957.
T26417.
RefSeqiNP_492671.1. NM_060270.4.
UniGeneiCel.22654.

Genome annotation databases

EnsemblMetazoaiY106G6D.7; Y106G6D.7; WBGene00013703.
GeneIDi172878.
KEGGicel:CELE_Y106G6D.7.
UCSCiY106G6D.7. c. elegans.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284601 Genomic DNA. Translation: CAA20980.2.
PIRiB87957.
T26417.
RefSeqiNP_492671.1. NM_060270.4.
UniGeneiCel.22654.

3D structure databases

ProteinModelPortaliQ9U304.
SMRiQ9U304.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

DIPiDIP-26480N.
IntActiQ9U304. 13 interactors.
MINTiMINT-1041092.
STRINGi6239.Y106G6D.7.

Proteomic databases

EPDiQ9U304.
PaxDbiQ9U304.
PeptideAtlasiQ9U304.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiY106G6D.7; Y106G6D.7; WBGene00013703.
GeneIDi172878.
KEGGicel:CELE_Y106G6D.7.
UCSCiY106G6D.7. c. elegans.

Organism-specific databases

CTDi172878.
WormBaseiY106G6D.7; CE24110; WBGene00013703.

Phylogenomic databases

eggNOGiKOG4307. Eukaryota.
ENOG410ZN03. LUCA.
GeneTreeiENSGT00760000119102.
HOGENOMiHOG000019591.
InParanoidiQ9U304.
OMAiDRWIAEF.
OrthoDBiEOG091G06A4.

Gene expression databases

BgeeiWBGene00013703.

Family and domain databases

InterProiView protein in InterPro
IPR000504. RRM_dom.
PfamiView protein in Pfam
PF00076. RRM_1. 1 hit.
SMARTiView protein in SMART
SM00360. RRM. 2 hits.
SUPFAMiSSF54928. SSF54928. 3 hits.
ProtoNetiSearch...

Entry informationi

Entry nameiQ9U304_CAEEL
AccessioniPrimary (citable) accession number: Q9U304
Entry historyiIntegrated into UniProtKB/TrEMBL: May 1, 2000
Last sequence update: May 1, 2000
Last modified: June 7, 2017
This is version 120 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.