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Q9U2T9 (Q9U2T9_CAEEL) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 104. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Interactions·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
Gene names
Name:itsn-1 EMBL CAB55138.2 WormBase Y116A8C.36a
ORF Names:CELE_Y116A8C.36 EMBL CAB55138.2, Y116A8C.36 WormBase Y116A8C.36a
OrganismCaenorhabditis elegans [Reference proteome] EMBL CAB55138.2
Taxonomic identifier6239 [NCBI]
Taxonomic lineageEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis

Protein attributes

Sequence length1085 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Sequence similarities

Contains 5 SH3 domains. RuleBase RU003338

Binary interactions

Sequences

Sequence LengthMass (Da)Tools
Q9U2T9 [UniParc].

Last modified July 22, 2008. Version 2.
Checksum: 256F5E87CC3898CF

FASTA1,085120,492
        10         20         30         40         50         60 
MTNPWEVSDA EYQKNFAMFG QLTGGQPFMD AVTARNALMR SNLPTQVLSQ IWALSDLDKD 

        70         80         90        100        110        120 
GRLDIREYSI AMRLALNCLA GIPIPPQLPP SLLVVPARNA PPTWPGSRHG SVDYSQTLPP 

       130        140        150        160        170        180 
AIDRRMSQSY IPSAPVSIAG TPSSRHNSIS AGSPLNNDRN VFEGRQLENW AIPHHNKLKY 

       190        200        210        220        230        240 
SQLFNALDKE RLGSLSSQVG RSALGLSGLP TNVLAHIWFL SDVNKDGKLS VDEYAISQYM 

       250        260        270        280        290        300 
IEMFKSGFAL PKITPLELVR MCGISSRSAN NTPELEPGAE PPQKSPAPKT FEDKRQDNLS 

       310        320        330        340        350        360 
KGQAELERRR RVLEEEEQRR RAEVEKKERE EEAKKNRERQ EKERQAEVER QAELERQRII 

       370        380        390        400        410        420 
EAQREEEEKK RRLEMERRRE EDEKMRKVQM EKAKVKQMQN QKQQENERLA QRQQREKTLQ 

       430        440        450        460        470        480 
FQLQALDEKV IDVEVDIGKA KEAVAEVTGF IERMRSTRDE KVARIKELQE TNQKTAIESQ 

       490        500        510        520        530        540 
ELGHQLLQKQ SAHKETTQRK SELEALRRKR DAIRKAIEDA ALELSTEKEK SYNQTEILKT 

       550        560        570        580        590        600 
NKEKYKTDVY SKLVAKREEY RNSFELLVHA QTHARSKIGE FEAKSAPASA APAPAPAPAP 

       610        620        630        640        650        660 
TTTNGFPANF NDAFGEFDKT DASQRFDADF GATSTADPFA QIAQAPAHSK GAVDQSAFNI 

       670        680        690        700        710        720 
HDTYKCRALF AFEARSEDEL SFEPGDVIIV FQSHAAEPGW RAGQLREKVG WFPEAFVEAI 

       730        740        750        760        770        780 
AAVPTPGGDP PIQNMPPNMT PSSSVDQIGV KAARKAEIAA AMGLTEGGAP PASSAPAAAA 

       790        800        810        820        830        840 
VISQCIAQFQ WRARNEEDLS FAKGDTIEVL EKQEMKWKGR NPAGEIGWFP KSYVKEVGAT 

       850        860        870        880        890        900 
TSTTTPIVSP SKASAGAPGA AAGAQYDVVP SDVTLQASET APQQQLYTVI YDFEAVETTD 

       910        920        930        940        950        960 
LALHVGDTIL VLEKNDEWWK GRCNGREGIF PANYVEISVQ QAGDPTPPTQ APTPAAPPTV 

       970        980        990       1000       1010       1020 
LCEAKVVVDF VASAPNQLGI KVGEIVKIRE KSAAGWWEGE LIRNGKPIAG WFPGEYVKVL 

      1030       1040       1050       1060       1070       1080 
EEAASPATRA TAVYDYEASQ PDELGFKTGD VIIVTDKSEA EWWSGHREQD PSKSGLFPSN 


YVQQQ 

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References

[1]"Genome sequence of the nematode C. elegans: a platform for investigating biology."
The C. elegans sequencing consortium
Science 282:2012-2018(1998) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Bristol N2.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AL117204 Genomic DNA. Translation: CAB55138.2.
RefSeqNP_001255927.1. NM_001268998.1.
UniGeneCel.11645.

3D structure databases

ProteinModelPortalQ9U2T9.
SMRQ9U2T9. Positions 18-93, 170-259, 287-547, 667-717, 768-1082.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

IntActQ9U2T9. 58 interactions.
STRING6239.Y116A8C.36.

Proteomic databases

PaxDbQ9U2T9.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaY116A8C.36a.1; Y116A8C.36a.1; Y116A8C.36.
Y116A8C.36a.2; Y116A8C.36a.2; Y116A8C.36.
GeneID178491.
KEGGcel:CELE_Y116A8C.36.
UCSCY116A8C.36. c. elegans.

Organism-specific databases

CTD178491.
WormBaseY116A8C.36a; CE42665; WBGene00006405; itsn-1.

Phylogenomic databases

eggNOGNOG301764.
HOGENOMHOG000199523.
InParanoidQ9U2T9.
OMAKSTIDGM.
PhylomeDBQ9U2T9.

Enzyme and pathway databases

SignaLinkQ9U2T9.

Family and domain databases

Gene3D1.10.238.10. 2 hits.
InterProIPR011992. EF-hand-dom_pair.
IPR018247. EF_Hand_1_Ca_BS.
IPR002048. EF_hand_dom.
IPR000261. EPS15_homology.
IPR011511. SH3_2.
IPR001452. SH3_domain.
[Graphical view]
PfamPF00018. SH3_1. 2 hits.
PF07653. SH3_2. 2 hits.
[Graphical view]
PRINTSPR00452. SH3DOMAIN.
SMARTSM00054. EFh. 2 hits.
SM00027. EH. 2 hits.
SM00326. SH3. 5 hits.
[Graphical view]
SUPFAMSSF50044. SSF50044. 5 hits.
PROSITEPS00018. EF_HAND_1. 2 hits.
PS50222. EF_HAND_2. 2 hits.
PS50031. EH. 2 hits.
PS50002. SH3. 5 hits.
[Graphical view]
ProtoNetSearch...

Other

NextBio901344.
PROQ9U2T9.

Entry information

Entry nameQ9U2T9_CAEEL
AccessionPrimary (citable) accession number: Q9U2T9
Entry history
Integrated into UniProtKB/TrEMBL: May 1, 2000
Last sequence update: July 22, 2008
Last modified: April 16, 2014
This is version 104 of the entry and version 2 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)