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Q9U2D9 (GYS_CAEEL) Reviewed, UniProtKB/Swiss-Prot

Last modified April 16, 2014. Version 93. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Probable glycogen [starch] synthase

EC=2.4.1.11
Gene names
Name:gsy-1
ORF Names:Y46G5A.31
OrganismCaenorhabditis elegans [Reference proteome]
Taxonomic identifier6239 [NCBI]
Taxonomic lineageEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis

Protein attributes

Sequence length672 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Transfers the glycosyl residue from UDPG to the non-reducing end of alpha-1,4-glucan.

Catalytic activity

UDP-glucose ((1->4)-alpha-D-glucosyl)(n) = UDP + ((1->4)-alpha-D-glucosyl)(n+1).

Pathway

Glycan biosynthesis; glycogen biosynthesis.

Sequence similarities

Belongs to the glycosyltransferase 3 family.

Ontologies

Keywords
   Biological processGlycogen biosynthesis
   Molecular functionGlycosyltransferase
Transferase
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processglycogen biosynthetic process

Inferred from electronic annotation. Source: UniProtKB-UniPathway

   Molecular_functionglycogen (starch) synthase activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 672672Probable glycogen [starch] synthase
PRO_0000194770

Sites

Binding site561UDP-glucose By similarity

Sequences

Sequence LengthMass (Da)Tools
Q9U2D9 [UniParc].

Last modified May 1, 2000. Version 1.
Checksum: 3B3C3E9044CAC8A0

FASTA67276,459
        10         20         30         40         50         60 
MPDHARMPRN LSSNKIAKTI AGEDLDEEEV LEMDAGQSAR EEGRFVFECA WEVANKVGGI 

        70         80         90        100        110        120 
YTVLRSKAQI STEELGDQYC MFGPMKDGKW RLEVDPIEPE NRTIRAAMKR FQADGFRCMY 

       130        140        150        160        170        180 
GRWLIEGYPK VILFDLGSGA VKMNEWKHEL FEQCKIGIPH EDIESNDAVI LGFMVALFLK 

       190        200        210        220        230        240 
HFRESVTSYT PLVVAHFHEW QAGVGLLMTR LWKLDIATVY TTHATLLGRH LCAGGADLYN 

       250        260        270        280        290        300 
NLDSFDLDAE AGKRKIYHQY CLERAACQTA HIFTTVSEIT GLEAEHFLCR KPDVLTPNGL 

       310        320        330        340        350        360 
NVVKFAALHE FQNLHAQNKE KINQFIRGHF HGHLDFDLDK TLYFFTAGRY EFSNKGGDMF 

       370        380        390        400        410        420 
IESLARLNHY LKTTSDPRHM GVTVVAFLIY PAPANSFNVE SLKGQAVTKQ LKEAVDRIKE 

       430        440        450        460        470        480 
KVGQRIFDIC LQGHLPEPEE LMSPADNILL KRCIMSLHNS SLPPICTHNM IRADDPVLES 

       490        500        510        520        530        540 
LRRTSLFNKP EDRVKVVFHP EFLSSVSPLI GLDYEDFVRG CHLGVFPSYY EPWGYTPAEC 

       550        560        570        580        590        600 
TVMGIPSVST NLSGFGCFMQ EHVEDHEQKG IYVIDRRHKA AEESVQELAQ VMYDFCGQSR 

       610        620        630        640        650        660 
RQRIILRNSN EGLSALLDWQ NLGVFYRDCR RLALERLHPD VDKIMRDNEG KVPSAATSRR 

       670 
PSIHSSDGED DE 

« Hide

References

[1]"Genome sequence of the nematode C. elegans: a platform for investigating biology."
The C. elegans sequencing consortium
Science 282:2012-2018(1998) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Bristol N2.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AL110485 Genomic DNA. Translation: CAB60373.1.
RefSeqNP_496736.1. NM_064335.5.
UniGeneCel.7404.

3D structure databases

ProteinModelPortalQ9U2D9.
SMRQ9U2D9. Positions 42-640.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

BioGrid40222. 10 interactions.
DIPDIP-26557N.
IntActQ9U2D9. 14 interactions.
MINTMINT-1087535.
STRING6239.Y46G5A.31.

Protein family/group databases

CAZyGT3. Glycosyltransferase Family 3.

Proteomic databases

PaxDbQ9U2D9.
PRIDEQ9U2D9.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaY46G5A.31; Y46G5A.31; Y46G5A.31.
GeneID174924.
KEGGcel:CELE_Y46G5A.31.
UCSCY46G5A.31. c. elegans.

Organism-specific databases

CTD174924.
WormBaseY46G5A.31; CE24302; WBGene00001793; gsy-1.

Phylogenomic databases

eggNOGCOG0438.
HOGENOMHOG000160890.
InParanoidQ9U2D9.
KOK00693.
OMAEVSWEVT.
OrthoDBEOG741Z1N.
PhylomeDBQ9U2D9.

Enzyme and pathway databases

UniPathwayUPA00164.

Family and domain databases

InterProIPR008631. Glycogen_synth.
[Graphical view]
PANTHERPTHR10176. PTHR10176. 1 hit.
PfamPF05693. Glycogen_syn. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

NextBio886062.

Entry information

Entry nameGYS_CAEEL
AccessionPrimary (citable) accession number: Q9U2D9
Entry history
Integrated into UniProtKB/Swiss-Prot: January 11, 2001
Last sequence update: May 1, 2000
Last modified: April 16, 2014
This is version 93 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programCaenorhabditis annotation project

Relevant documents

SIMILARITY comments

Index of protein domains and families

PATHWAY comments

Index of metabolic and biosynthesis pathways

Caenorhabditis elegans

Caenorhabditis elegans: entries, gene names and cross-references to WormBase