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Q9U2D9

- GYS_CAEEL

UniProt

Q9U2D9 - GYS_CAEEL

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Protein

Probable glycogen [starch] synthase

Gene

gsy-1

Organism
Caenorhabditis elegans
Status
Reviewed - Annotation score: 3 out of 5- Experimental evidence at protein leveli

Functioni

Transfers the glycosyl residue from UDPG to the non-reducing end of alpha-1,4-glucan.

Catalytic activityi

UDP-alpha-D-glucose + ((1->4)-alpha-D-glucosyl)(n) = UDP + ((1->4)-alpha-D-glucosyl)(n+1).

Pathwayi

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei56 – 561UDP-glucoseBy similarity

GO - Molecular functioni

  1. glycogen (starch) synthase activity Source: UniProtKB-EC

GO - Biological processi

  1. glycogen biosynthetic process Source: UniProtKB-UniPathway
Complete GO annotation...

Keywords - Molecular functioni

Glycosyltransferase, Transferase

Keywords - Biological processi

Glycogen biosynthesis

Enzyme and pathway databases

UniPathwayiUPA00164.

Protein family/group databases

CAZyiGT3. Glycosyltransferase Family 3.

Names & Taxonomyi

Protein namesi
Recommended name:
Probable glycogen [starch] synthase (EC:2.4.1.11)
Gene namesi
Name:gsy-1
ORF Names:Y46G5A.31
OrganismiCaenorhabditis elegans
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
ProteomesiUP000001940: Chromosome II

Organism-specific databases

WormBaseiY46G5A.31; CE24302; WBGene00001793; gsy-1.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 672672Probable glycogen [starch] synthasePRO_0000194770Add
BLAST

Proteomic databases

PaxDbiQ9U2D9.
PRIDEiQ9U2D9.

Interactioni

Protein-protein interaction databases

BioGridi40222. 10 interactions.
DIPiDIP-26557N.
IntActiQ9U2D9. 14 interactions.
MINTiMINT-1087535.
STRINGi6239.Y46G5A.31.

Structurei

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
4QLBX-ray2.60A/B/C/D1-672[»]
ProteinModelPortaliQ9U2D9.
SMRiQ9U2D9. Positions 42-640.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyltransferase 3 family.Curated

Phylogenomic databases

eggNOGiCOG0438.
GeneTreeiENSGT00390000018612.
HOGENOMiHOG000160890.
InParanoidiQ9U2D9.
KOiK00693.
OMAiEVSWEVT.
OrthoDBiEOG741Z1N.
PhylomeDBiQ9U2D9.

Family and domain databases

InterProiIPR008631. Glycogen_synth.
[Graphical view]
PANTHERiPTHR10176. PTHR10176. 1 hit.
PfamiPF05693. Glycogen_syn. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9U2D9-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MPDHARMPRN LSSNKIAKTI AGEDLDEEEV LEMDAGQSAR EEGRFVFECA
60 70 80 90 100
WEVANKVGGI YTVLRSKAQI STEELGDQYC MFGPMKDGKW RLEVDPIEPE
110 120 130 140 150
NRTIRAAMKR FQADGFRCMY GRWLIEGYPK VILFDLGSGA VKMNEWKHEL
160 170 180 190 200
FEQCKIGIPH EDIESNDAVI LGFMVALFLK HFRESVTSYT PLVVAHFHEW
210 220 230 240 250
QAGVGLLMTR LWKLDIATVY TTHATLLGRH LCAGGADLYN NLDSFDLDAE
260 270 280 290 300
AGKRKIYHQY CLERAACQTA HIFTTVSEIT GLEAEHFLCR KPDVLTPNGL
310 320 330 340 350
NVVKFAALHE FQNLHAQNKE KINQFIRGHF HGHLDFDLDK TLYFFTAGRY
360 370 380 390 400
EFSNKGGDMF IESLARLNHY LKTTSDPRHM GVTVVAFLIY PAPANSFNVE
410 420 430 440 450
SLKGQAVTKQ LKEAVDRIKE KVGQRIFDIC LQGHLPEPEE LMSPADNILL
460 470 480 490 500
KRCIMSLHNS SLPPICTHNM IRADDPVLES LRRTSLFNKP EDRVKVVFHP
510 520 530 540 550
EFLSSVSPLI GLDYEDFVRG CHLGVFPSYY EPWGYTPAEC TVMGIPSVST
560 570 580 590 600
NLSGFGCFMQ EHVEDHEQKG IYVIDRRHKA AEESVQELAQ VMYDFCGQSR
610 620 630 640 650
RQRIILRNSN EGLSALLDWQ NLGVFYRDCR RLALERLHPD VDKIMRDNEG
660 670
KVPSAATSRR PSIHSSDGED DE
Length:672
Mass (Da):76,459
Last modified:May 1, 2000 - v1
Checksum:i3B3C3E9044CAC8A0
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AL110485 Genomic DNA. Translation: CAB60373.1.
RefSeqiNP_496736.1. NM_064335.5.
UniGeneiCel.7404.

Genome annotation databases

EnsemblMetazoaiY46G5A.31; Y46G5A.31; WBGene00001793.
GeneIDi174924.
KEGGicel:CELE_Y46G5A.31.
UCSCiY46G5A.31. c. elegans.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AL110485 Genomic DNA. Translation: CAB60373.1 .
RefSeqi NP_496736.1. NM_064335.5.
UniGenei Cel.7404.

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
4QLB X-ray 2.60 A/B/C/D 1-672 [» ]
ProteinModelPortali Q9U2D9.
SMRi Q9U2D9. Positions 42-640.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

BioGridi 40222. 10 interactions.
DIPi DIP-26557N.
IntActi Q9U2D9. 14 interactions.
MINTi MINT-1087535.
STRINGi 6239.Y46G5A.31.

Protein family/group databases

CAZyi GT3. Glycosyltransferase Family 3.

Proteomic databases

PaxDbi Q9U2D9.
PRIDEi Q9U2D9.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblMetazoai Y46G5A.31 ; Y46G5A.31 ; WBGene00001793 .
GeneIDi 174924.
KEGGi cel:CELE_Y46G5A.31.
UCSCi Y46G5A.31. c. elegans.

Organism-specific databases

CTDi 174924.
WormBasei Y46G5A.31 ; CE24302 ; WBGene00001793 ; gsy-1.

Phylogenomic databases

eggNOGi COG0438.
GeneTreei ENSGT00390000018612.
HOGENOMi HOG000160890.
InParanoidi Q9U2D9.
KOi K00693.
OMAi EVSWEVT.
OrthoDBi EOG741Z1N.
PhylomeDBi Q9U2D9.

Enzyme and pathway databases

UniPathwayi UPA00164 .

Miscellaneous databases

NextBioi 886062.

Family and domain databases

InterProi IPR008631. Glycogen_synth.
[Graphical view ]
PANTHERi PTHR10176. PTHR10176. 1 hit.
Pfami PF05693. Glycogen_syn. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Genome sequence of the nematode C. elegans: a platform for investigating biology."
    The C. elegans sequencing consortium
    Science 282:2012-2018(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Bristol N2.

Entry informationi

Entry nameiGYS_CAEEL
AccessioniPrimary (citable) accession number: Q9U2D9
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 11, 2001
Last sequence update: May 1, 2000
Last modified: October 29, 2014
This is version 96 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programCaenorhabditis annotation project

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. Caenorhabditis elegans
    Caenorhabditis elegans: entries, gene names and cross-references to WormBase
  2. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  3. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  4. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3