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Q9U2D9

- GYS_CAEEL

UniProt

Q9U2D9 - GYS_CAEEL

Protein

Probable glycogen [starch] synthase

Gene

gsy-1

Organism
Caenorhabditis elegans
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 95 (01 Oct 2014)
      Sequence version 1 (01 May 2000)
      Previous versions | rss
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    Functioni

    Transfers the glycosyl residue from UDPG to the non-reducing end of alpha-1,4-glucan.

    Catalytic activityi

    UDP-alpha-D-glucose + ((1->4)-alpha-D-glucosyl)(n) = UDP + ((1->4)-alpha-D-glucosyl)(n+1).

    Pathwayi

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Binding sitei56 – 561UDP-glucoseBy similarity

    GO - Molecular functioni

    1. glycogen (starch) synthase activity Source: UniProtKB-EC

    GO - Biological processi

    1. glycogen biosynthetic process Source: UniProtKB-UniPathway

    Keywords - Molecular functioni

    Glycosyltransferase, Transferase

    Keywords - Biological processi

    Glycogen biosynthesis

    Enzyme and pathway databases

    UniPathwayiUPA00164.

    Protein family/group databases

    CAZyiGT3. Glycosyltransferase Family 3.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Probable glycogen [starch] synthase (EC:2.4.1.11)
    Gene namesi
    Name:gsy-1
    ORF Names:Y46G5A.31
    OrganismiCaenorhabditis elegans
    Taxonomic identifieri6239 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
    ProteomesiUP000001940: Chromosome II

    Organism-specific databases

    WormBaseiY46G5A.31; CE24302; WBGene00001793; gsy-1.

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 672672Probable glycogen [starch] synthasePRO_0000194770Add
    BLAST

    Proteomic databases

    PaxDbiQ9U2D9.
    PRIDEiQ9U2D9.

    Interactioni

    Protein-protein interaction databases

    BioGridi40222. 10 interactions.
    DIPiDIP-26557N.
    IntActiQ9U2D9. 14 interactions.
    MINTiMINT-1087535.
    STRINGi6239.Y46G5A.31.

    Structurei

    3D structure databases

    ProteinModelPortaliQ9U2D9.
    SMRiQ9U2D9. Positions 42-640.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the glycosyltransferase 3 family.Curated

    Phylogenomic databases

    eggNOGiCOG0438.
    GeneTreeiENSGT00390000018612.
    HOGENOMiHOG000160890.
    InParanoidiQ9U2D9.
    KOiK00693.
    OMAiEVSWEVT.
    OrthoDBiEOG741Z1N.
    PhylomeDBiQ9U2D9.

    Family and domain databases

    InterProiIPR008631. Glycogen_synth.
    [Graphical view]
    PANTHERiPTHR10176. PTHR10176. 1 hit.
    PfamiPF05693. Glycogen_syn. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q9U2D9-1 [UniParc]FASTAAdd to Basket

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    MPDHARMPRN LSSNKIAKTI AGEDLDEEEV LEMDAGQSAR EEGRFVFECA    50
    WEVANKVGGI YTVLRSKAQI STEELGDQYC MFGPMKDGKW RLEVDPIEPE 100
    NRTIRAAMKR FQADGFRCMY GRWLIEGYPK VILFDLGSGA VKMNEWKHEL 150
    FEQCKIGIPH EDIESNDAVI LGFMVALFLK HFRESVTSYT PLVVAHFHEW 200
    QAGVGLLMTR LWKLDIATVY TTHATLLGRH LCAGGADLYN NLDSFDLDAE 250
    AGKRKIYHQY CLERAACQTA HIFTTVSEIT GLEAEHFLCR KPDVLTPNGL 300
    NVVKFAALHE FQNLHAQNKE KINQFIRGHF HGHLDFDLDK TLYFFTAGRY 350
    EFSNKGGDMF IESLARLNHY LKTTSDPRHM GVTVVAFLIY PAPANSFNVE 400
    SLKGQAVTKQ LKEAVDRIKE KVGQRIFDIC LQGHLPEPEE LMSPADNILL 450
    KRCIMSLHNS SLPPICTHNM IRADDPVLES LRRTSLFNKP EDRVKVVFHP 500
    EFLSSVSPLI GLDYEDFVRG CHLGVFPSYY EPWGYTPAEC TVMGIPSVST 550
    NLSGFGCFMQ EHVEDHEQKG IYVIDRRHKA AEESVQELAQ VMYDFCGQSR 600
    RQRIILRNSN EGLSALLDWQ NLGVFYRDCR RLALERLHPD VDKIMRDNEG 650
    KVPSAATSRR PSIHSSDGED DE 672
    Length:672
    Mass (Da):76,459
    Last modified:May 1, 2000 - v1
    Checksum:i3B3C3E9044CAC8A0
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AL110485 Genomic DNA. Translation: CAB60373.1.
    RefSeqiNP_496736.1. NM_064335.5.
    UniGeneiCel.7404.

    Genome annotation databases

    EnsemblMetazoaiY46G5A.31; Y46G5A.31; WBGene00001793.
    GeneIDi174924.
    KEGGicel:CELE_Y46G5A.31.
    UCSCiY46G5A.31. c. elegans.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AL110485 Genomic DNA. Translation: CAB60373.1 .
    RefSeqi NP_496736.1. NM_064335.5.
    UniGenei Cel.7404.

    3D structure databases

    ProteinModelPortali Q9U2D9.
    SMRi Q9U2D9. Positions 42-640.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    BioGridi 40222. 10 interactions.
    DIPi DIP-26557N.
    IntActi Q9U2D9. 14 interactions.
    MINTi MINT-1087535.
    STRINGi 6239.Y46G5A.31.

    Protein family/group databases

    CAZyi GT3. Glycosyltransferase Family 3.

    Proteomic databases

    PaxDbi Q9U2D9.
    PRIDEi Q9U2D9.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblMetazoai Y46G5A.31 ; Y46G5A.31 ; WBGene00001793 .
    GeneIDi 174924.
    KEGGi cel:CELE_Y46G5A.31.
    UCSCi Y46G5A.31. c. elegans.

    Organism-specific databases

    CTDi 174924.
    WormBasei Y46G5A.31 ; CE24302 ; WBGene00001793 ; gsy-1.

    Phylogenomic databases

    eggNOGi COG0438.
    GeneTreei ENSGT00390000018612.
    HOGENOMi HOG000160890.
    InParanoidi Q9U2D9.
    KOi K00693.
    OMAi EVSWEVT.
    OrthoDBi EOG741Z1N.
    PhylomeDBi Q9U2D9.

    Enzyme and pathway databases

    UniPathwayi UPA00164 .

    Miscellaneous databases

    NextBioi 886062.

    Family and domain databases

    InterProi IPR008631. Glycogen_synth.
    [Graphical view ]
    PANTHERi PTHR10176. PTHR10176. 1 hit.
    Pfami PF05693. Glycogen_syn. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Genome sequence of the nematode C. elegans: a platform for investigating biology."
      The C. elegans sequencing consortium
      Science 282:2012-2018(1998) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: Bristol N2.

    Entry informationi

    Entry nameiGYS_CAEEL
    AccessioniPrimary (citable) accession number: Q9U2D9
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: January 11, 2001
    Last sequence update: May 1, 2000
    Last modified: October 1, 2014
    This is version 95 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programCaenorhabditis annotation project

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Caenorhabditis elegans
      Caenorhabditis elegans: entries, gene names and cross-references to WormBase
    2. PATHWAY comments
      Index of metabolic and biosynthesis pathways
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3