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Q9U2D9

- GYS_CAEEL

UniProt

Q9U2D9 - GYS_CAEEL

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Protein
Probable glycogen [starch] synthase
Gene
gsy-1, Y46G5A.31
Organism
Caenorhabditis elegans
Status
Reviewed - Annotation score: 3 out of 5 - Protein inferred from homologyi

Functioni

Transfers the glycosyl residue from UDPG to the non-reducing end of alpha-1,4-glucan.

Catalytic activityi

UDP-glucose ((1->4)-alpha-D-glucosyl)(n) = UDP + ((1->4)-alpha-D-glucosyl)(n+1).

Pathwayi

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei56 – 561UDP-glucose By similarity

GO - Molecular functioni

  1. glycogen (starch) synthase activity Source: UniProtKB-EC

GO - Biological processi

  1. glycogen biosynthetic process Source: UniProtKB-UniPathway
Complete GO annotation...

Keywords - Molecular functioni

Glycosyltransferase, Transferase

Keywords - Biological processi

Glycogen biosynthesis

Enzyme and pathway databases

UniPathwayiUPA00164.

Protein family/group databases

CAZyiGT3. Glycosyltransferase Family 3.

Names & Taxonomyi

Protein namesi
Recommended name:
Probable glycogen [starch] synthase (EC:2.4.1.11)
Gene namesi
Name:gsy-1
ORF Names:Y46G5A.31
OrganismiCaenorhabditis elegans
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
ProteomesiUP000001940: Chromosome II

Organism-specific databases

WormBaseiY46G5A.31; CE24302; WBGene00001793; gsy-1.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 672672Probable glycogen [starch] synthase
PRO_0000194770Add
BLAST

Proteomic databases

PaxDbiQ9U2D9.
PRIDEiQ9U2D9.

Interactioni

Protein-protein interaction databases

BioGridi40222. 10 interactions.
DIPiDIP-26557N.
IntActiQ9U2D9. 14 interactions.
MINTiMINT-1087535.
STRINGi6239.Y46G5A.31.

Structurei

3D structure databases

ProteinModelPortaliQ9U2D9.
SMRiQ9U2D9. Positions 42-640.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG0438.
GeneTreeiENSGT00390000018612.
HOGENOMiHOG000160890.
InParanoidiQ9U2D9.
KOiK00693.
OMAiEVSWEVT.
OrthoDBiEOG741Z1N.
PhylomeDBiQ9U2D9.

Family and domain databases

InterProiIPR008631. Glycogen_synth.
[Graphical view]
PANTHERiPTHR10176. PTHR10176. 1 hit.
PfamiPF05693. Glycogen_syn. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9U2D9-1 [UniParc]FASTAAdd to Basket

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MPDHARMPRN LSSNKIAKTI AGEDLDEEEV LEMDAGQSAR EEGRFVFECA    50
WEVANKVGGI YTVLRSKAQI STEELGDQYC MFGPMKDGKW RLEVDPIEPE 100
NRTIRAAMKR FQADGFRCMY GRWLIEGYPK VILFDLGSGA VKMNEWKHEL 150
FEQCKIGIPH EDIESNDAVI LGFMVALFLK HFRESVTSYT PLVVAHFHEW 200
QAGVGLLMTR LWKLDIATVY TTHATLLGRH LCAGGADLYN NLDSFDLDAE 250
AGKRKIYHQY CLERAACQTA HIFTTVSEIT GLEAEHFLCR KPDVLTPNGL 300
NVVKFAALHE FQNLHAQNKE KINQFIRGHF HGHLDFDLDK TLYFFTAGRY 350
EFSNKGGDMF IESLARLNHY LKTTSDPRHM GVTVVAFLIY PAPANSFNVE 400
SLKGQAVTKQ LKEAVDRIKE KVGQRIFDIC LQGHLPEPEE LMSPADNILL 450
KRCIMSLHNS SLPPICTHNM IRADDPVLES LRRTSLFNKP EDRVKVVFHP 500
EFLSSVSPLI GLDYEDFVRG CHLGVFPSYY EPWGYTPAEC TVMGIPSVST 550
NLSGFGCFMQ EHVEDHEQKG IYVIDRRHKA AEESVQELAQ VMYDFCGQSR 600
RQRIILRNSN EGLSALLDWQ NLGVFYRDCR RLALERLHPD VDKIMRDNEG 650
KVPSAATSRR PSIHSSDGED DE 672
Length:672
Mass (Da):76,459
Last modified:May 1, 2000 - v1
Checksum:i3B3C3E9044CAC8A0
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AL110485 Genomic DNA. Translation: CAB60373.1.
RefSeqiNP_496736.1. NM_064335.5.
UniGeneiCel.7404.

Genome annotation databases

EnsemblMetazoaiY46G5A.31; Y46G5A.31; WBGene00001793.
GeneIDi174924.
KEGGicel:CELE_Y46G5A.31.
UCSCiY46G5A.31. c. elegans.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AL110485 Genomic DNA. Translation: CAB60373.1 .
RefSeqi NP_496736.1. NM_064335.5.
UniGenei Cel.7404.

3D structure databases

ProteinModelPortali Q9U2D9.
SMRi Q9U2D9. Positions 42-640.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

BioGridi 40222. 10 interactions.
DIPi DIP-26557N.
IntActi Q9U2D9. 14 interactions.
MINTi MINT-1087535.
STRINGi 6239.Y46G5A.31.

Protein family/group databases

CAZyi GT3. Glycosyltransferase Family 3.

Proteomic databases

PaxDbi Q9U2D9.
PRIDEi Q9U2D9.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblMetazoai Y46G5A.31 ; Y46G5A.31 ; WBGene00001793 .
GeneIDi 174924.
KEGGi cel:CELE_Y46G5A.31.
UCSCi Y46G5A.31. c. elegans.

Organism-specific databases

CTDi 174924.
WormBasei Y46G5A.31 ; CE24302 ; WBGene00001793 ; gsy-1.

Phylogenomic databases

eggNOGi COG0438.
GeneTreei ENSGT00390000018612.
HOGENOMi HOG000160890.
InParanoidi Q9U2D9.
KOi K00693.
OMAi EVSWEVT.
OrthoDBi EOG741Z1N.
PhylomeDBi Q9U2D9.

Enzyme and pathway databases

UniPathwayi UPA00164 .

Miscellaneous databases

NextBioi 886062.

Family and domain databases

InterProi IPR008631. Glycogen_synth.
[Graphical view ]
PANTHERi PTHR10176. PTHR10176. 1 hit.
Pfami PF05693. Glycogen_syn. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Genome sequence of the nematode C. elegans: a platform for investigating biology."
    The C. elegans sequencing consortium
    Science 282:2012-2018(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Bristol N2.

Entry informationi

Entry nameiGYS_CAEEL
AccessioniPrimary (citable) accession number: Q9U2D9
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 11, 2001
Last sequence update: May 1, 2000
Last modified: June 11, 2014
This is version 94 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programCaenorhabditis annotation project

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Caenorhabditis elegans
    Caenorhabditis elegans: entries, gene names and cross-references to WormBase
  2. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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