Unreviewed, UniProtKB/TrEMBL Q9U1J9 (Q9U1J9_DROME)

Names and origin

Protein names

Submitted name:
    SF1 protein EMBL CAB64937.1

Gene names

Name:	SF1 EMBL CAB64937.1
ORF Names:	CG5836 FlyBase FBgn0025571

Organism

Drosophila melanogaster (Fruit fly) EMBL CAB64937.1

Taxonomic identifier

7227 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Arthropoda › Hexapoda › Insecta › Pterygota › Neoptera › Endopterygota › Diptera › Brachycera › Muscomorpha › Ephydroidea › Drosophilidae › Drosophila › Sophophora

Protein attributes

Sequence length	773 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Evidence at transcript level.

General annotation (Comments)

Sequence similarities

Contains 1 KH domain. RuleBase RU003302V0

Ontologies

Gene Ontology (GO)
Cellular component	nucleus Ref.1 Inferred from direct assay. Source: FlyBase
Molecular function	RNA binding Inferred from electronic annotation. Source: InterPro zinc ion binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q9U1J9-1 [UniParc]. Last modified May 1, 2000. Version 1. Checksum: BEFCD08AE4755098	FASTA	773	86,527
	10 20 30 40 50 60 MSATPPDLLS LAASREVSAA VAVAASANGG SGRSADKERS RSRDRGRDKD KDRDKDRKKR 70 80 90 100 110 120 DKDSRDRDSR RRDDRGDRDR DRERDRDSRS HRSKSRNYDD GDRRRKRSRS RDRDRDRKRD 130 140 150 160 170 180 RDRDSRSRRS SSRGGRDDYD RSRRRRSRSR SYERRRNDRG SQRDQRDQPS QRSSRERTHV 190 200 210 220 230 240 NPFDTSNSRN SLNQDHDQSR IPSLFDRQQG LETIREEGRE QRFDLTQTIQ ELMGNAGGNK 250 260 270 280 290 300 GFASFFNSQN SNDSTSNGAF DNSADSAAER KRKRKSRWGG SENDKTFIPG MPTILPSTLD 310 320 330 340 350 360 PAQQEAYLVQ FQIEEISRKL RTGDLGITQN PEERSPSPEP IYSSDGKRLN TREFRYRKRL 370 380 390 400 410 420 EEQRHQLIVK MQTVNPEFKP PADYKPPVTR VSDKVLIPQE QHPDINFVGL LIGPRGNTLK 430 440 450 460 470 480 AMEKDTGAKI IIRGKGSVKE GKVGRKDGQP LPGEDEPLHA FITAPNPEAV RKAVDKIKDV 490 500 510 520 530 540 IRQGIEVPEG HNDLRRMQLR ELAQLNGTLR ENDIQRCTCG STDHKSWQCP DKPIITNTIV 550 560 570 580 590 600 CTSCGGTGHL TKDCRNKRPG SGVPGMACED SQAKIDEEYM SLMAELGEGP PPPSASAKTD 610 620 630 640 650 660 PPASNGPQLH RASYSIFDKK PSQMQAIQSP PSSSSRDHQR DLGGWGAAAH EHGMGMEHGM 670 680 690 700 710 720 GLDQHGHGLA AMDHGMSLGM EHAMAAYVPA PPGTQAPPPM PPPLMPWMSA PQPPPPATEP 730 740 750 760 770 LNPPIPGTLP PLIPPPPGTS ARPCRRGVEA LTVAGAAAMR RLHLRPAHRR HQP

References

[1]	"Splicing factor SF1 from Drosophila and Caenorhabditis: presence of an N-terminal RS domain and requirement for viability." Mazroui R., Puoti A., Kramer A. RNA 5:1615-1631(1999) [PubMed: 10606272] [Abstract] Cited for: NUCLEOTIDE SEQUENCE.

Cross-references

Sequence databases
EMBLGenBankDDBJ	AJ243904 mRNA. Translation: CAB64937.1.
3D structure databases
HSSP	HSSP built from PDB template 1K1G based on UniProtKB Q9BW01.
SMR	Q9U1J9. Positions 389-510.
ModBase	Search...
Proteomic databases
PRIDE	Q9U1J9.
Genome annotation databases
Ensembl	FBgn0025571. Drosophila melanogaster. [Contig view]
Organism-specific databases
FlyBase	FBgn0025571. SF1.
Gene expression databases
ArrayExpress	Q9U1J9.
Family and domain databases
InterPro	IPR004087. KH. IPR004088. KH_type_1. IPR018111. KH_type_1_subgr. IPR001878. Znf_CCHC. [Graphical view]
Pfam	PF00013. KH_1. 1 hit. PF00098. zf-CCHC. 1 hit. [Graphical view]
SMART	SM00322. KH. 1 hit. SM00343. ZnF_C2HC. 2 hits. [Graphical view]
PROSITE	PS50084. KH_TYPE_1. 1 hit. PS50158. ZF_CCHC. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q9U1J9_DROME

Accession

Primary (citable) accession number: Q9U1J9

Entry history

Integrated into UniProtKB/TrEMBL:	May 1, 2000
Last sequence update:	May 1, 2000
Last modified:	June 16, 2009
This is version 42 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)