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Q9TZK1

- Q9TZK1_CAEEL

UniProt

Q9TZK1 - Q9TZK1_CAEEL

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Protein
Submitted name: Protein FKH-8, isoform a
Gene
fkh-8, CELE_F40H3.4, F40H3.4
Organism
Caenorhabditis elegans
Status
Unreviewed - Annotation score: 2 out of 5 - Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  1. protein binding Source: IntAct
  2. sequence-specific DNA binding Source: InterPro
  3. sequence-specific DNA binding transcription factor activity Source: InterPro
Complete GO annotation...

GO - Biological processi

  1. transcription, DNA-templated Source: UniProtKB-KW
Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulationSAAS annotations

Keywords - Ligandi

DNA-bindingSAAS annotations

Names & Taxonomyi

Protein namesi
Submitted name:
Protein FKH-8, isoform aImported
Gene namesi
Name:fkh-8Imported
ORF Names:CELE_F40H3.4Imported, F40H3.4Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
ProteomesiUP000001940: Chromosome II

Organism-specific databases

WormBaseiF40H3.4a; CE19865; WBGene00001440; fkh-8.

Subcellular locationi

Nucleus By similarity SAAS annotations

GO - Cellular componenti

  1. nucleus Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

NucleusSAAS annotations

Interactioni

Binary interactionsi

WithEntry#Exp.IntActNotes
T04C9.1Q8MPT26EBI-2315690,EBI-2315635

Protein-protein interaction databases

IntActiQ9TZK1. 1 interaction.
STRINGi6239.F40H3.4.

Structurei

3D structure databases

ProteinModelPortaliQ9TZK1.
SMRiQ9TZK1. Positions 56-134.

Family & Domainsi

Sequence similaritiesi

Contains fork-head DNA-binding domain.SAAS annotations

Phylogenomic databases

eggNOGiCOG5025.
GeneTreeiENSGT00750000117475.
HOGENOMiHOG000016962.
InParanoidiQ9TZK1.
PhylomeDBiQ9TZK1.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
InterProiIPR001766. TF_fork_head.
IPR018122. TF_fork_head_CS.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF00250. Fork_head. 1 hit.
[Graphical view]
PRINTSiPR00053. FORKHEAD.
SMARTiSM00339. FH. 1 hit.
[Graphical view]
PROSITEiPS00657. FORK_HEAD_1. 1 hit.
PS00658. FORK_HEAD_2. 1 hit.
PS50039. FORK_HEAD_3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9TZK1-1 [UniParc]FASTAAdd to Basket

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MSDLSSSLCQ LNWLIAKGGL NTVQEIEVPE NPNIVGSPVA PAHEGKRRRI    50
FDGADKPPYS YSQLIRLAIE DTPDKKCTLA EIYSFIAHNF QFYRENRNSS 100
WKNSIRHNLS LNKQFSRIEK TDGDRRGWWV CVDPPAKKPR ILKGSPVRVN 150
PIYEHLYHNK QDMPNFTPPP EDPFLSEING NVHELTEHEI RDLNLFESYD 200
LNSSFRDVYN QIFEKSTSPN GKKQAAQIDW LKISLEAAGL DYHDEQELQE 250
VDTDKLKDYV YNGFPAECDS DVSTPRTDSG RHSSSDSVLS ATLQPVNNDS 300
DDEYDWDKLL 310
Length:310
Mass (Da):35,520
Last modified:May 1, 2000 - v1
Checksum:iC8582170D1CC8293
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
FO080721 Genomic DNA. Translation: CCD66154.1.
PIRiT33497.
RefSeqiNP_001254106.1. NM_001267177.1.
UniGeneiCel.15170.

Genome annotation databases

EnsemblMetazoaiF40H3.4a; F40H3.4a; WBGene00001440.
GeneIDi174026.
KEGGicel:CELE_F40H3.4.
UCSCiF40H3.4. c. elegans.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
FO080721 Genomic DNA. Translation: CCD66154.1 .
PIRi T33497.
RefSeqi NP_001254106.1. NM_001267177.1.
UniGenei Cel.15170.

3D structure databases

ProteinModelPortali Q9TZK1.
SMRi Q9TZK1. Positions 56-134.
ModBasei Search...

Protein-protein interaction databases

IntActi Q9TZK1. 1 interaction.
STRINGi 6239.F40H3.4.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblMetazoai F40H3.4a ; F40H3.4a ; WBGene00001440 .
GeneIDi 174026.
KEGGi cel:CELE_F40H3.4.
UCSCi F40H3.4. c. elegans.

Organism-specific databases

CTDi 174026.
WormBasei F40H3.4a ; CE19865 ; WBGene00001440 ; fkh-8.

Phylogenomic databases

eggNOGi COG5025.
GeneTreei ENSGT00750000117475.
HOGENOMi HOG000016962.
InParanoidi Q9TZK1.
PhylomeDBi Q9TZK1.

Miscellaneous databases

NextBioi 882187.

Family and domain databases

Gene3Di 1.10.10.10. 1 hit.
InterProi IPR001766. TF_fork_head.
IPR018122. TF_fork_head_CS.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view ]
Pfami PF00250. Fork_head. 1 hit.
[Graphical view ]
PRINTSi PR00053. FORKHEAD.
SMARTi SM00339. FH. 1 hit.
[Graphical view ]
PROSITEi PS00657. FORK_HEAD_1. 1 hit.
PS00658. FORK_HEAD_2. 1 hit.
PS50039. FORK_HEAD_3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Genome sequence of the nematode C. elegans: a platform for investigating biology."
    The C. elegans sequencing consortium
    Science 282:2012-2018(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Bristol N2.

Entry informationi

Entry nameiQ9TZK1_CAEEL
AccessioniPrimary (citable) accession number: Q9TZK1
Entry historyi
Integrated into UniProtKB/TrEMBL: May 1, 2000
Last sequence update: May 1, 2000
Last modified: July 9, 2014
This is version 108 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

External Data

Dasty 3

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