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Q9TZK1

- Q9TZK1_CAEEL

UniProt

Q9TZK1 - Q9TZK1_CAEEL

Protein
Submitted name:

Protein FKH-8, isoform a

Gene

fkh-8

Organism
Caenorhabditis elegans
Status
Unreviewed - Annotation score: 2 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 109 (01 Oct 2014)
      Sequence version 1 (01 May 2000)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. protein binding Source: IntAct
    2. sequence-specific DNA binding Source: InterPro
    3. sequence-specific DNA binding transcription factor activity Source: InterPro

    GO - Biological processi

    1. transcription, DNA-templated Source: UniProtKB-KW

    Keywords - Biological processi

    Transcription, Transcription regulationSAAS annotation

    Keywords - Ligandi

    DNA-bindingSAAS annotation

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Protein FKH-8, isoform aImported
    Gene namesi
    Name:fkh-8Imported
    ORF Names:CELE_F40H3.4Imported, F40H3.4Imported
    OrganismiCaenorhabditis elegansImported
    Taxonomic identifieri6239 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
    ProteomesiUP000001940: Chromosome II

    Organism-specific databases

    WormBaseiF40H3.4a; CE19865; WBGene00001440; fkh-8.

    Subcellular locationi

    Nucleus SAAS annotation

    GO - Cellular componenti

    1. nucleus Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    NucleusSAAS annotation

    Interactioni

    Binary interactionsi

    WithEntry#Exp.IntActNotes
    T04C9.1Q8MPT26EBI-2315690,EBI-2315635

    Protein-protein interaction databases

    IntActiQ9TZK1. 1 interaction.
    STRINGi6239.F40H3.4.

    Structurei

    3D structure databases

    ProteinModelPortaliQ9TZK1.
    SMRiQ9TZK1. Positions 56-134.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Contains fork-head DNA-binding domain.SAAS annotation

    Phylogenomic databases

    eggNOGiCOG5025.
    GeneTreeiENSGT00750000117475.
    HOGENOMiHOG000016962.
    InParanoidiQ9TZK1.
    PhylomeDBiQ9TZK1.

    Family and domain databases

    Gene3Di1.10.10.10. 1 hit.
    InterProiIPR001766. TF_fork_head.
    IPR018122. TF_fork_head_CS.
    IPR011991. WHTH_DNA-bd_dom.
    [Graphical view]
    PfamiPF00250. Fork_head. 1 hit.
    [Graphical view]
    PRINTSiPR00053. FORKHEAD.
    SMARTiSM00339. FH. 1 hit.
    [Graphical view]
    PROSITEiPS00657. FORK_HEAD_1. 1 hit.
    PS00658. FORK_HEAD_2. 1 hit.
    PS50039. FORK_HEAD_3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q9TZK1-1 [UniParc]FASTAAdd to Basket

    « Hide

    MSDLSSSLCQ LNWLIAKGGL NTVQEIEVPE NPNIVGSPVA PAHEGKRRRI    50
    FDGADKPPYS YSQLIRLAIE DTPDKKCTLA EIYSFIAHNF QFYRENRNSS 100
    WKNSIRHNLS LNKQFSRIEK TDGDRRGWWV CVDPPAKKPR ILKGSPVRVN 150
    PIYEHLYHNK QDMPNFTPPP EDPFLSEING NVHELTEHEI RDLNLFESYD 200
    LNSSFRDVYN QIFEKSTSPN GKKQAAQIDW LKISLEAAGL DYHDEQELQE 250
    VDTDKLKDYV YNGFPAECDS DVSTPRTDSG RHSSSDSVLS ATLQPVNNDS 300
    DDEYDWDKLL 310
    Length:310
    Mass (Da):35,520
    Last modified:May 1, 2000 - v1
    Checksum:iC8582170D1CC8293
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    FO080721 Genomic DNA. Translation: CCD66154.1.
    PIRiT33497.
    RefSeqiNP_001254106.1. NM_001267177.1.
    UniGeneiCel.15170.

    Genome annotation databases

    EnsemblMetazoaiF40H3.4a; F40H3.4a; WBGene00001440.
    GeneIDi174026.
    KEGGicel:CELE_F40H3.4.
    UCSCiF40H3.4. c. elegans.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    FO080721 Genomic DNA. Translation: CCD66154.1 .
    PIRi T33497.
    RefSeqi NP_001254106.1. NM_001267177.1.
    UniGenei Cel.15170.

    3D structure databases

    ProteinModelPortali Q9TZK1.
    SMRi Q9TZK1. Positions 56-134.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    IntActi Q9TZK1. 1 interaction.
    STRINGi 6239.F40H3.4.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblMetazoai F40H3.4a ; F40H3.4a ; WBGene00001440 .
    GeneIDi 174026.
    KEGGi cel:CELE_F40H3.4.
    UCSCi F40H3.4. c. elegans.

    Organism-specific databases

    CTDi 174026.
    WormBasei F40H3.4a ; CE19865 ; WBGene00001440 ; fkh-8.

    Phylogenomic databases

    eggNOGi COG5025.
    GeneTreei ENSGT00750000117475.
    HOGENOMi HOG000016962.
    InParanoidi Q9TZK1.
    PhylomeDBi Q9TZK1.

    Miscellaneous databases

    NextBioi 882187.

    Family and domain databases

    Gene3Di 1.10.10.10. 1 hit.
    InterProi IPR001766. TF_fork_head.
    IPR018122. TF_fork_head_CS.
    IPR011991. WHTH_DNA-bd_dom.
    [Graphical view ]
    Pfami PF00250. Fork_head. 1 hit.
    [Graphical view ]
    PRINTSi PR00053. FORKHEAD.
    SMARTi SM00339. FH. 1 hit.
    [Graphical view ]
    PROSITEi PS00657. FORK_HEAD_1. 1 hit.
    PS00658. FORK_HEAD_2. 1 hit.
    PS50039. FORK_HEAD_3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Genome sequence of the nematode C. elegans: a platform for investigating biology."
      The C. elegans sequencing consortium
      Science 282:2012-2018(1998) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: Bristol N2Imported.

    Entry informationi

    Entry nameiQ9TZK1_CAEEL
    AccessioniPrimary (citable) accession number: Q9TZK1
    Entry historyi
    Integrated into UniProtKB/TrEMBL: May 1, 2000
    Last sequence update: May 1, 2000
    Last modified: October 1, 2014
    This is version 109 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3