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Q9TZC4 (Q9TZC4_CAEEL) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 117. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Interactions·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
Gene names
Name:pat-4 EMBL CCD66066.1 WormBase C29F9.7
ORF Names:C29F9.7 WormBase C29F9.7, CELE_C29F9.7 EMBL CCD66066.1
OrganismCaenorhabditis elegans [Reference proteome] EMBL CCD66066.1
Taxonomic identifier6239 [NCBI]
Taxonomic lineageEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis

Protein attributes

Sequence length466 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Sequence similarities

Contains 3 ANK repeats. RuleBase RU003321

Binary interactions

With

Entry

#Exp.

IntAct

Notes

pat-6O167854EBI-1564527,EBI-328106
unc-112Q186855EBI-1564527,EBI-1564809

Sequences

Sequence LengthMass (Da)Tools
Q9TZC4 [UniParc].

Last modified May 1, 2000. Version 1.
Checksum: 0D13147657A0DF11

FASTA46652,260
        10         20         30         40         50         60 
MSLSTHYHAH KPNVPIIMED VFGWVREGNA FQVRVWLDDH EHDLNVGDDH AFSLLHWAAK 

        70         80         90        100        110        120 
GGHVAIAEML LSRGARVNST NMGDDTSLHL AAAHGHRQIV VKLLSRKADV NATNEHGMTP 

       130        140        150        160        170        180 
LHYACFWGYE QIAEDLISCG AAVNVCNKKG MTPLDVCQPM CKNTILEIAQ EHGQSPNDRV 

       190        200        210        220        230        240 
PFKDTTWKGT KSRTRDATLS RYTGVDVSSL NLITKIAESH SGELWRGKWQ GNDIVARILN 

       250        260        270        280        290        300 
VQEVTARISR DFQTEFPALR IFAHPNICAV LAAANQPPNL VIISQYMPFG SLYNVLHEQS 

       310        320        330        340        350        360 
SVVIDHGQAV RFALDIARGM SYLHSLDPML LRFYLSSKHV VVDEELTAKL SMADTKFSFQ 

       370        380        390        400        410        420 
EVGKAYSPAW MSPEALSRAP EDLNIRAADM WSFAILLWEL NTREVPFSDL PPMECGMKIA 

       430        440        450        460 
LEGLRVHIPP GIARNMNRLM NICMNEDPGR RPNFDQIIPI LERMIL 

« Hide

References

[1]"Genome sequence of the nematode C. elegans: a platform for investigating biology."
The C. elegans sequencing consortium
Science 282:2012-2018(1998) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Bristol N2.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
FO080710 Genomic DNA. Translation: CCD66066.1.
PIRT33574.
RefSeqNP_497139.1. NM_064738.5.
UniGeneCel.10243.

3D structure databases

ProteinModelPortalQ9TZC4.
SMRQ9TZC4. Positions 20-465.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

IntActQ9TZC4. 4 interactions.

Proteomic databases

PRIDEQ9TZC4.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaC29F9.7; C29F9.7; WBGene00003931.
GeneID175175.
KEGGcel:CELE_C29F9.7.
UCSCC29F9.7. c. elegans.

Organism-specific databases

CTD175175.
WormBaseC29F9.7; CE19706; WBGene00003931; pat-4.

Phylogenomic databases

GeneTreeENSGT00750000117425.
HOGENOMHOG000047828.
InParanoidQ9TZC4.
KOK06272.
OMARDFNEEH.
OrthoDBEOG7T1RB0.
PhylomeDBQ9TZC4.

Family and domain databases

Gene3D1.25.40.20. 1 hit.
InterProIPR002110. Ankyrin_rpt.
IPR020683. Ankyrin_rpt-contain_dom.
IPR016253. Integrin-linked_kinase.
IPR011009. Kinase-like_dom.
IPR000719. Prot_kinase_dom.
IPR001245. Ser-Thr/Tyr_kinase_cat_dom.
[Graphical view]
PfamPF12796. Ank_2. 1 hit.
PF07714. Pkinase_Tyr. 1 hit.
[Graphical view]
PIRSFPIRSF000654. Integrin-linked_kinase. 1 hit.
SMARTSM00248. ANK. 3 hits.
[Graphical view]
SUPFAMSSF48403. SSF48403. 1 hit.
SSF56112. SSF56112. 1 hit.
PROSITEPS50297. ANK_REP_REGION. 1 hit.
PS50088. ANK_REPEAT. 3 hits.
PS50011. PROTEIN_KINASE_DOM. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

NextBio887074.
PROQ9TZC4.

Entry information

Entry nameQ9TZC4_CAEEL
AccessionPrimary (citable) accession number: Q9TZC4
Entry history
Integrated into UniProtKB/TrEMBL: May 1, 2000
Last sequence update: May 1, 2000
Last modified: July 9, 2014
This is version 117 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)