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Protein
Submitted name:

NucleOLar protein

Gene

nol-1

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
NucleOLar proteinImported
Gene namesi
Name:nol-1Imported
ORF Names:CELE_W07E6.1Imported, W07E6.1Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome II

Organism-specific databases

WormBaseiW07E6.1a; CE28259; WBGene00021073; nol-1.

PTM / Processingi

Proteomic databases

EPDiQ9TYV5.
PaxDbiQ9TYV5.
PRIDEiQ9TYV5.

Interactioni

Protein-protein interaction databases

IntActiQ9TYV5. 1 interaction.
STRINGi6239.W07E6.1.

Structurei

3D structure databases

ProteinModelPortaliQ9TYV5.
SMRiQ9TYV5. Positions 199-509.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini221 – 509289SAM_MT_RSMB_NOPInterPro annotationAdd
BLAST

Coiled coil

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Coiled coili519 – 54830Sequence analysisAdd
BLAST

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiKOG1122. Eukaryota.
COG0144. LUCA.
GeneTreeiENSGT00660000095341.
HOGENOMiHOG000224258.
InParanoidiQ9TYV5.
KOiK14835.
OMAiRSNGPKS.
OrthoDBiEOG7FBRHF.
PhylomeDBiQ9TYV5.

Family and domain databases

Gene3Di3.40.50.150. 1 hit.
InterProiIPR018314. Fmu/NOL1/Nop2p_CS.
IPR031341. Methyltr_RsmF_N.
IPR001678. MeTrfase_RsmB/NOP2.
IPR011023. Nop2p.
IPR023267. RCMT.
IPR023273. RCMT_NOP2.
IPR029063. SAM-dependent_MTases.
[Graphical view]
PfamiPF01189. Methyltr_RsmB-F. 1 hit.
PF17125. Methyltr_RsmF_N. 1 hit.
[Graphical view]
PRINTSiPR02008. RCMTFAMILY.
PR02012. RCMTNOP2.
SUPFAMiSSF53335. SSF53335. 1 hit.
TIGRFAMsiTIGR00446. nop2p. 1 hit.
PROSITEiPS01153. NOL1_NOP2_SUN. 1 hit.
PS51686. SAM_MT_RSMB_NOP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9TYV5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAIVKKKKVS AASKAATEKP EVKKAVKRPV AETEAVTPKK KKLVKKVKKS
60 70 80 90 100
AKKAHEEEPI EQVEKLQLID DDEDGLEGLS FPGSDDEDLR DDYSDDDSDA
110 120 130 140 150
GDHLPIEKKS AALDKQKEKI IAEGEEELQL NIANQATFEL PTVEEIENEM
160 170 180 190 200
KSVPNLEIVK QRIADVIQVL GDFKNRRDPQ KSRENYVEVL KKDLCSQYGY
210 220 230 240 250
NDYLMGKFMD LFPNGAELLE FLEANDNPRP VTIRANSLKV KRRDLAKNLI
260 270 280 290 300
NRGMNVDPAA DWTKVGLVVY DSQVPVGATP EYLAGHYMIQ GLNSLLPVMA
310 320 330 340 350
LAPQPGDRVL DMCSAPGGKT SHIAALMKNS GVLFANDANF TRCRAIIGNL
360 370 380 390 400
HRLGVNNTVV CNLGGEEFSK IRPNGFDRIL LDAPCSGTGV IWKDQSVKTS
410 420 430 440 450
KDSQDVQRRH TMQRQLILSA LDSLDANSPN GGYLVYSTCS VLVEENEAVV
460 470 480 490 500
NFLLERRHCE LVPTGLSIGV DGYTRFRDYR FHPSLSMTKR YYPHVHNIDG
510 520 530 540 550
FYVAKIKKLS NAKMSKQGVM EKEKEKAAQK SQNKKNKAEA EASESSDDEE
560 570 580 590 600
EKKNGVEVNG QKKPAKKQQQ KKQKADGDDS DDDNNAPMKN IGSGARANKK
610 620 630 640 650
RRNQKKAAEK QAAVKEDDGF NTVGNVKRAK KPTQFKSKVP KRAAARTGAK
660
SVKNRRKKML AKQQ
Length:664
Mass (Da):73,905
Last modified:October 1, 2001 - v2
Checksum:iB5D2B1C00C4DFE09
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284602 Genomic DNA. Translation: CCD73642.1.
PIRiD88022.
T33803.
RefSeqiNP_493742.1. NM_061341.5.
UniGeneiCel.34217.

Genome annotation databases

EnsemblMetazoaiW07E6.1; W07E6.1; WBGene00021073.
GeneIDi173437.
KEGGicel:CELE_W07E6.1.
UCSCiW07E6.1. c. elegans.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284602 Genomic DNA. Translation: CCD73642.1.
PIRiD88022.
T33803.
RefSeqiNP_493742.1. NM_061341.5.
UniGeneiCel.34217.

3D structure databases

ProteinModelPortaliQ9TYV5.
SMRiQ9TYV5. Positions 199-509.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

IntActiQ9TYV5. 1 interaction.
STRINGi6239.W07E6.1.

Proteomic databases

EPDiQ9TYV5.
PaxDbiQ9TYV5.
PRIDEiQ9TYV5.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiW07E6.1; W07E6.1; WBGene00021073.
GeneIDi173437.
KEGGicel:CELE_W07E6.1.
UCSCiW07E6.1. c. elegans.

Organism-specific databases

CTDi173437.
WormBaseiW07E6.1a; CE28259; WBGene00021073; nol-1.

Phylogenomic databases

eggNOGiKOG1122. Eukaryota.
COG0144. LUCA.
GeneTreeiENSGT00660000095341.
HOGENOMiHOG000224258.
InParanoidiQ9TYV5.
KOiK14835.
OMAiRSNGPKS.
OrthoDBiEOG7FBRHF.
PhylomeDBiQ9TYV5.

Family and domain databases

Gene3Di3.40.50.150. 1 hit.
InterProiIPR018314. Fmu/NOL1/Nop2p_CS.
IPR031341. Methyltr_RsmF_N.
IPR001678. MeTrfase_RsmB/NOP2.
IPR011023. Nop2p.
IPR023267. RCMT.
IPR023273. RCMT_NOP2.
IPR029063. SAM-dependent_MTases.
[Graphical view]
PfamiPF01189. Methyltr_RsmB-F. 1 hit.
PF17125. Methyltr_RsmF_N. 1 hit.
[Graphical view]
PRINTSiPR02008. RCMTFAMILY.
PR02012. RCMTNOP2.
SUPFAMiSSF53335. SSF53335. 1 hit.
TIGRFAMsiTIGR00446. nop2p. 1 hit.
PROSITEiPS01153. NOL1_NOP2_SUN. 1 hit.
PS51686. SAM_MT_RSMB_NOP. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Genome sequence of the nematode C. elegans: a platform for investigating biology."
    Caenorhabditis elegans Sequencing Consortium
    Sulson J.E., Waterston R.
    Science 282:2012-2018(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Bristol N2Imported.

Entry informationi

Entry nameiQ9TYV5_CAEEL
AccessioniPrimary (citable) accession number: Q9TYV5
Entry historyi
Integrated into UniProtKB/TrEMBL: May 1, 2000
Last sequence update: October 1, 2001
Last modified: June 8, 2016
This is version 108 of the entry and version 2 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.