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Q9TY03 (FRDA_CAEEL) Reviewed, UniProtKB/Swiss-Prot

Last modified May 1, 2013. Version 79. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Frataxin, mitochondrial
Short name=Fxn
EC=1.16.3.1
Gene names
Name:frh-1
ORF Names:F59G1.7
OrganismCaenorhabditis elegans [Reference proteome]
Taxonomic identifier6239 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Ecdysozoa › Nematoda › Chromadorea › Rhabditida › Rhabditoidea › Rhabditidae › Peloderinae › Caenorhabditis

Protein attributes

Sequence length136 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceEvidence at transcript level

General annotation (Comments)

Function

Promotes the biosynthesis of heme as well as the assembly and repair of iron-sulfur clusters by delivering Fe2+ to proteins involved in these pathways. May play a role in the protection against iron-catalyzed oxidative stress through its ability to catalyze the oxidation of Fe2+ to Fe3+. May be able to store large amounts of the metal in the form of a ferrihydrite mineral by oligomerization. Ref.3

Catalytic activity

4 Fe2+ + 4 H+ + O2 = 4 Fe3+ + 2 H2O.

Subunit structure

Monomer. Oligomer By similarity.

Subcellular location

Mitochondrion By similarity.

Sequence similarities

Belongs to the frataxin family.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Transit peptide1 – ?Mitochondrion Potential
Chain? – 136Frataxin, mitochondrialPRO_0000193925

Sequences

Sequence LengthMass (Da)Tools
Q9TY03 [UniParc].

Last modified May 1, 2000. Version 1.
Checksum: 0ACB254346E38272

FASTA13615,718
        10         20         30         40         50         60 
MLSTILRNNF VRRSFSSRIF SQNEYETAAD STLERLSDYF DQIADSFPVS EQFDVSHAMG 

        70         80         90        100        110        120 
VLTVNVSKSV GTYVINKQSP NKQIWLSSPM SGPKRYDLEE EGKWTYAHDG EQLDSLLNRE 

       130 
FRKILADDRI DFSRHV

« Hide

References

« Hide 'large scale' references
[1]"Characterization of the Caenorhabditis elegans ortholog of the frataxin."
Vazquez-Manrique R.P., Baylis H.A., Palau F.
Submitted (JUL-2001) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [MRNA].
Strain: Bristol N2.
[2]"Genome sequence of the nematode C. elegans: a platform for investigating biology."
The C. elegans sequencing consortium
Science 282:2012-2018(1998) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Bristol N2.
[3]"Reduction of Caenorhabditis elegans frataxin increases sensitivity to oxidative stress, reduces lifespan, and causes lethality in a mitochondrial complex II mutant."
Vazquez-Manrique R.P., Gonzalez-Cabo P., Ros S., Aziz H., Baylis H.A., Palau F.
FASEB J. 20:172-174(2006) [PubMed] [Europe PMC] [Abstract]
Cited for: FUNCTION.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AY048153 mRNA. Translation: AAL05950.1.
FO081244 Genomic DNA. Translation: CCD70156.1.
PIRT34316.
RefSeqNP_495183.1. NM_062782.3.
UniGeneCel.20708.

3D structure databases

ProteinModelPortalQ9TY03.
SMRQ9TY03. Positions 22-133.
ModBaseSearch...

Protein-protein interaction databases

IntActQ9TY03. 1 interaction.
STRING6239.F59G1.7.2.

Proteomic databases

PaxDbQ9TY03.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaF59G1.7.1; F59G1.7.1; F59G1.7.
F59G1.7.2; F59G1.7.2; F59G1.7.
GeneID174002.
KEGGcel:CELE_F59G1.7.
UCSCF59G1.7.1. c. elegans.

Organism-specific databases

CTD174002.
WormBaseF59G1.7; CE19476; WBGene00001486; frh-1.

Phylogenomic databases

eggNOGCOG1965.
GeneTreeENSGT00390000005811.
HOGENOMHOG000190729.
InParanoidQ9TY03.
OMAYFDQIAD.

Family and domain databases

Gene3D3.30.920.10. 1 hit.
InterProIPR017789. Frataxin.
IPR002908. Frataxin/CyaY.
IPR020895. Frataxin_CS.
[Graphical view]
PANTHERPTHR16821. PTHR16821. 1 hit.
PfamPF01491. Frataxin_Cyay. 1 hit.
[Graphical view]
PRINTSPR00904. FRATAXIN.
SUPFAMSSF55387. Frataxin_like. 1 hit.
TIGRFAMsTIGR03421. FeS_CyaY. 1 hit.
TIGR03422. mito_frataxin. 1 hit.
PROSITEPS01344. FRATAXIN_1. 1 hit.
PS50810. FRATAXIN_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

NextBio882063.

Entry information

Entry nameFRDA_CAEEL
AccessionPrimary (citable) accession number: Q9TY03
Entry history
Integrated into UniProtKB/Swiss-Prot: December 1, 2000
Last sequence update: May 1, 2000
Last modified: May 1, 2013
This is version 79 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programCaenorhabditis annotation project

Relevant documents

Caenorhabditis elegans

Caenorhabditis elegans: entries, gene names and cross-references to WormBase

SIMILARITY comments

Index of protein domains and families

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