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Q9TP17 (Q9TP17_MOUSE) Unreviewed, UniProtKB/TrEMBL

Last modified April 3, 2013. Version 88. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
MHC class II antigen beta chain EMBL AAF21604.3
Gene names
Name:H2-Ab1 MGI 103070
Synonyms:Rmcs1 EMBL AAF21604.3
OrganismMus musculus (Mouse) EMBL AAF21604.3
Taxonomic identifier10090 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Mus › Mus

Protein attributes

Sequence length255 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

General annotation (Comments)

Sequence similarities

Contains 1 Ig-like C1-type (immunoglobulin-like) domain. SAAS SAAS003597

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 1717 Potential EMBL AAF21604.3
Chain18 – 255238 Potential EMBL AAF21604.3
PRO_5000053360

Sequences

Sequence LengthMass (Da)Tools
Q9TP17 [UniParc].

Last modified October 17, 2006. Version 3.
Checksum: F4C1055554BCFBA5

FASTA25529,345
        10         20         30         40         50         60 
MHARAAASVM DICRIRLGDS ERHFVYQFMG ECYFTNGTQR IRYVTRYIYN REEYVRYDSD 

        70         80         90        100        110        120 
VGEHRAVTEL GRPDAEYWNS QPEILERTRA ELDTVCRHNY EGPETHTSLR RLEQPNVVIS 

       130        140        150        160        170        180 
LSRTEALNHH NTLVCSVTDF YPAKIKVRWF RNGQEETVGV SSTQLIRNGD WTFQVLVMLE 

       190        200        210        220        230        240 
MTPRRGEVYT CHVEHPSLKS PITVEWRAQS ESAWSKMLSG IGGCVLGVIF LGLGLFIRHR 

       250 
SQKGPRGPPP AGLLQ

« Hide

References

[1]"Hidden variables: unstable Abeta chain genes encoding antigen recognition structures in tumor survivors."
Liu Y., McMinimy D.L., Savinov A.Y., Johnson K.A., Kremlev S.G., Chapoval A.I., Egorov I.K.
Mol. Immunol. 37:1091-1110(2000) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL AAF21604.3.
Tissue: Tail EMBL AAF21604.3.
[2]"Cloning and expression of mouse Rmcs1, Rmcs2 and Rmcs5 genes: a candidate immune suppression complex."
Savinov A.Y., Liu Y., McMinimy D.L., Johnson K.A., Egorov I.K.
Submitted (SEP-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C57BL/6J EMBL AAF21604.3.
Tissue: Tail EMBL AAF21604.3.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AF015280 Genomic DNA. Translation: AAF21604.3.
IPIIPI00126585.

3D structure databases

ProteinModelPortalQ9TP17.
SMRQ9TP17. Positions 19-208.
ModBaseSearch...

Protein-protein interaction databases

STRING10090.ENSMUSP00000041008.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Phylogenomic databases

HOVERGENHBG012730.
InParanoidQ9TP17.

Gene expression databases

GenevestigatorQ9TP17.

Family and domain databases

Gene3D2.60.40.10. 1 hit.
3.10.320.10. 1 hit.
InterProIPR007110. Ig-like_dom.
IPR013783. Ig-like_fold.
IPR003006. Ig/MHC_CS.
IPR003597. Ig_C1-set.
IPR011162. MHC_I/II-like_Ag-recog.
IPR014745. MHC_II_a/b_N.
IPR000353. MHC_II_b_N.
[Graphical view]
PfamPF07654. C1-set. 1 hit.
PF00969. MHC_II_beta. 1 hit.
[Graphical view]
ProDomPD000328. MHC_II_b_N. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SMARTSM00407. IGc1. 1 hit.
SM00921. MHC_II_beta. 1 hit.
[Graphical view]
SUPFAMSSF54452. MHC_I/II-like_Ag-recog. 1 hit.
PROSITEPS50835. IG_LIKE. 1 hit.
PS00290. IG_MHC. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ9TP17_MOUSE
AccessionPrimary (citable) accession number: Q9TP17
Entry history
Integrated into UniProtKB/TrEMBL: May 1, 2000
Last sequence update: October 17, 2006
Last modified: April 3, 2013
This is version 88 of the entry and version 3 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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