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Protein

50S ribosomal protein L1, chloroplastic

Gene

rpl1

Organism
Cyanidium caldarium (Red alga)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

Binds directly to 23S rRNA. Might be involved in E site tRNA release (Potential).Curated

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein, RNA-binding, rRNA-binding

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L1, chloroplastic
Gene namesi
Name:rpl1
Encoded oniPlastid; Chloroplast
OrganismiCyanidium caldarium (Red alga)
Taxonomic identifieri2771 [NCBI]
Taxonomic lineageiEukaryotaRhodophytaBangiophyceaeCyanidialesCyanidiaceaeCyanidium

Subcellular locationi

GO - Cellular componenti

Keywords - Cellular componenti

Chloroplast, Plastid

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001257851 – 24050S ribosomal protein L1, chloroplasticAdd BLAST240

Interactioni

Subunit structurei

Part of the 50S ribosomal subunit.By similarity

Structurei

3D structure databases

ProteinModelPortaliQ9TM00
SMRiQ9TM00
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Family and domain databases

CDDicd00403 Ribosomal_L1, 1 hit
Gene3Di3.40.50.790, 1 hit
HAMAPiMF_01318_B Ribosomal_L1_B, 1 hit
InterProiView protein in InterPro
IPR005878 Ribosom_L1_bac-type
IPR002143 Ribosomal_L1
IPR023674 Ribosomal_L1-like
IPR028364 Ribosomal_L1/biogenesis
IPR016095 Ribosomal_L1_3-a/b-sand
IPR023673 Ribosomal_L1_CS
PfamiView protein in Pfam
PF00687 Ribosomal_L1, 1 hit
PIRSFiPIRSF002155 Ribosomal_L1, 1 hit
SUPFAMiSSF56808 SSF56808, 1 hit
TIGRFAMsiTIGR01169 rplA_bact, 1 hit
PROSITEiView protein in PROSITE
PS01199 RIBOSOMAL_L1, 1 hit

Sequencei

Sequence statusi: Complete.

Q9TM00-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVKIRSRRFK ILQSQISVEK MCEPIEAINL LKSGPKAKFS ETFEVHCCLD
60 70 80 90 100
LNTKYSDQQL RASVVLPKGT GKRTKIAVIT NEAEVNKIKN FGVDIVGSKD
110 120 130 140 150
LVESIANGFL EFDQLLTTPD MMPVIAKVGK ILGPRGLMPS PKSGSVTSDI
160 170 180 190 200
YNAIQEFKKG KLEYRTDKSG IVHSIIGKID FTAEDLLNNL IAIKKSIDQN
210 220 230 240
RPNGAKGKYW KNMYLCTTMS PAIKIDFNKL QELEKNYGQN
Length:240
Mass (Da):26,817
Last modified:May 1, 2000 - v1
Checksum:i1FE194C7853095D2
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF022186 Genomic DNA Translation: AAF12977.1
RefSeqiNP_045117.1, NC_001840.1

Genome annotation databases

GeneIDi800135

Similar proteinsi

Entry informationi

Entry nameiRK1_CYACA
AccessioniPrimary (citable) accession number: Q9TM00
Entry historyiIntegrated into UniProtKB/Swiss-Prot: June 1, 2001
Last sequence update: May 1, 2000
Last modified: May 10, 2017
This is version 69 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)

Miscellaneousi

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families

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