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Q9T079

- TPS4_ARATH

UniProt

Q9T079 - TPS4_ARATH

Protein

Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 4

Gene

TPS4

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 81 (01 Oct 2014)
      Sequence version 1 (01 May 2000)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    UDP-glucose + D-glucose 6-phosphate = UDP + alpha,alpha-trehalose 6-phosphate.

    GO - Molecular functioni

    1. alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity Source: TAIR

    GO - Biological processi

    1. trehalose biosynthetic process Source: TAIR

    Keywords - Molecular functioni

    Glycosyltransferase, Transferase

    Protein family/group databases

    CAZyiGT20. Glycosyltransferase Family 20.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 4 (EC:2.4.1.15)
    Alternative name(s):
    Trehalose-6-phosphate synthase 4
    Short name:
    AtTPS4
    Gene namesi
    Name:TPS4
    Ordered Locus Names:At4g27550
    ORF Names:T29A15.40
    OrganismiArabidopsis thaliana (Mouse-ear cress)
    Taxonomic identifieri3702 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
    ProteomesiUP000006548: Chromosome 4

    Organism-specific databases

    TAIRiAT4G27550.

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 795795Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 4PRO_0000324825Add
    BLAST

    Proteomic databases

    PRIDEiQ9T079.

    Expressioni

    Gene expression databases

    GenevestigatoriQ9T079.

    Interactioni

    Protein-protein interaction databases

    STRINGi3702.AT4G27550.1-P.

    Structurei

    3D structure databases

    ProteinModelPortaliQ9T079.
    SMRiQ9T079. Positions 30-465.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Region

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Regioni4 – 469466GlycosyltransferaseAdd
    BLAST

    Sequence similaritiesi

    In the N-terminal section; belongs to the glycosyltransferase 20 family.Curated
    In the C-terminal section; belongs to the trehalose phosphatase family.Curated

    Phylogenomic databases

    eggNOGiCOG0380.
    HOGENOMiHOG000191477.
    InParanoidiQ9T079.
    KOiK16055.
    OMAiEPERFIN.
    PhylomeDBiQ9T079.

    Family and domain databases

    Gene3Di3.40.50.1000. 2 hits.
    InterProiIPR001830. Glyco_trans_20.
    IPR023214. HAD-like_dom.
    IPR003337. Trehalose_PPase.
    [Graphical view]
    PfamiPF00982. Glyco_transf_20. 1 hit.
    PF02358. Trehalose_PPase. 1 hit.
    [Graphical view]
    SUPFAMiSSF56784. SSF56784. 2 hits.

    Sequencei

    Sequence statusi: Complete.

    Q9T079-1 [UniParc]FASTAAdd to Basket

    « Hide

    MARPRLLVVS MSLPVTAKRT GEESWSFTMS PGGLVSALLG LKEFETKWIG    50
    WPGVDVHDAI GKKTLSITLA EKGCIPVFLE EVCDQYYNGY CNNILWPIFH 100
    YLGTPPEYRN DATITYQSQY EAYKKANQIF FDVVKEHYEE GDVVWCHDYH 150
    VMLLPQYLKE YNSKMKVGWF LHTPFPSSEM YKTLPSRSDL LRSVLTADLV 200
    GFHTYDFARH FLNACMCILG VEATSEGIVD QGKVTRVAVF PIGIEPERFI 250
    NTSELSEVVQ YMKKFKNDFG GRKLILGVDR LDTIKGIPQK YQAFEKFLEE 300
    NAEWRGKVML LQIAVPTRNG IGEYQKIKDQ CHYHVGRING RFGSISSVPI 350
    IHLDCSIDFN QLCALYAITD VLLVTSLRDG MNLVSSEFIA CQKAEKGVLI 400
    LSEFAGAGQS LGAGAILVNP WNIKEVSSAI GEALNMSHEE KERKHKINFQ 450
    YVKTHSTQQW ADDFMKLTLT NILCSKLIEI TTSAELGAGL AATLELPEHD 500
    VIQQYSKSNN RLLILGFYGT LTQPMKNQER RGDGMNLELH PQLKERLKEL 550
    CSDPKTTVVV LSRSEKCILD KNFGEYNMWL AAENGMFLRH TSGEWVTRIP 600
    EHMNLEWIDG VKHVFKYFTE RTPGSYLETS EASLVWNYEN ADAEFGRAQA 650
    RDMLQHLWAG PISNASVDVV RGGQSVEVHA VGVTKGSAME RILGEIVHNK 700
    SMATPIDYVL CIGCFLGKDE DVYTFFEPEL TKKAKSLSSS GSDSPKKVSS 750
    TIVDLKGENY FSVAIGQTHT KARYFLDSSD DVVKLIGKLC THNNA 795
    Length:795
    Mass (Da):89,474
    Last modified:May 1, 2000 - v1
    Checksum:i4B9191CB2CE56126
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AL035602 Genomic DNA. Translation: CAB38267.1.
    AL161571 Genomic DNA. Translation: CAB81405.1.
    CP002687 Genomic DNA. Translation: AEE85356.1.
    PIRiT05860.
    RefSeqiNP_194485.1. NM_118890.2.
    UniGeneiAt.54527.

    Genome annotation databases

    EnsemblPlantsiAT4G27550.1; AT4G27550.1; AT4G27550.
    GeneIDi828864.
    KEGGiath:AT4G27550.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AL035602 Genomic DNA. Translation: CAB38267.1 .
    AL161571 Genomic DNA. Translation: CAB81405.1 .
    CP002687 Genomic DNA. Translation: AEE85356.1 .
    PIRi T05860.
    RefSeqi NP_194485.1. NM_118890.2.
    UniGenei At.54527.

    3D structure databases

    ProteinModelPortali Q9T079.
    SMRi Q9T079. Positions 30-465.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 3702.AT4G27550.1-P.

    Protein family/group databases

    CAZyi GT20. Glycosyltransferase Family 20.

    Proteomic databases

    PRIDEi Q9T079.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblPlantsi AT4G27550.1 ; AT4G27550.1 ; AT4G27550 .
    GeneIDi 828864.
    KEGGi ath:AT4G27550.

    Organism-specific databases

    TAIRi AT4G27550.

    Phylogenomic databases

    eggNOGi COG0380.
    HOGENOMi HOG000191477.
    InParanoidi Q9T079.
    KOi K16055.
    OMAi EPERFIN.
    PhylomeDBi Q9T079.

    Gene expression databases

    Genevestigatori Q9T079.

    Family and domain databases

    Gene3Di 3.40.50.1000. 2 hits.
    InterProi IPR001830. Glyco_trans_20.
    IPR023214. HAD-like_dom.
    IPR003337. Trehalose_PPase.
    [Graphical view ]
    Pfami PF00982. Glyco_transf_20. 1 hit.
    PF02358. Trehalose_PPase. 1 hit.
    [Graphical view ]
    SUPFAMi SSF56784. SSF56784. 2 hits.
    ProtoNeti Search...

    Publicationsi

    1. "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana."
      Mayer K.F.X., Schueller C., Wambutt R., Murphy G., Volckaert G., Pohl T., Duesterhoeft A., Stiekema W., Entian K.-D., Terryn N., Harris B., Ansorge W., Brandt P., Grivell L.A., Rieger M., Weichselgartner M., de Simone V., Obermaier B.
      , Mache R., Mueller M., Kreis M., Delseny M., Puigdomenech P., Watson M., Schmidtheini T., Reichert B., Portetelle D., Perez-Alonso M., Boutry M., Bancroft I., Vos P., Hoheisel J., Zimmermann W., Wedler H., Ridley P., Langham S.-A., McCullagh B., Bilham L., Robben J., van der Schueren J., Grymonprez B., Chuang Y.-J., Vandenbussche F., Braeken M., Weltjens I., Voet M., Bastiaens I., Aert R., Defoor E., Weitzenegger T., Bothe G., Ramsperger U., Hilbert H., Braun M., Holzer E., Brandt A., Peters S., van Staveren M., Dirkse W., Mooijman P., Klein Lankhorst R., Rose M., Hauf J., Koetter P., Berneiser S., Hempel S., Feldpausch M., Lamberth S., Van den Daele H., De Keyser A., Buysshaert C., Gielen J., Villarroel R., De Clercq R., van Montagu M., Rogers J., Cronin A., Quail M.A., Bray-Allen S., Clark L., Doggett J., Hall S., Kay M., Lennard N., McLay K., Mayes R., Pettett A., Rajandream M.A., Lyne M., Benes V., Rechmann S., Borkova D., Bloecker H., Scharfe M., Grimm M., Loehnert T.-H., Dose S., de Haan M., Maarse A.C., Schaefer M., Mueller-Auer S., Gabel C., Fuchs M., Fartmann B., Granderath K., Dauner D., Herzl A., Neumann S., Argiriou A., Vitale D., Liguori R., Piravandi E., Massenet O., Quigley F., Clabauld G., Muendlein A., Felber R., Schnabl S., Hiller R., Schmidt W., Lecharny A., Aubourg S., Chefdor F., Cooke R., Berger C., Monfort A., Casacuberta E., Gibbons T., Weber N., Vandenbol M., Bargues M., Terol J., Torres A., Perez-Perez A., Purnelle B., Bent E., Johnson S., Tacon D., Jesse T., Heijnen L., Schwarz S., Scholler P., Heber S., Francs P., Bielke C., Frishman D., Haase D., Lemcke K., Mewes H.-W., Stocker S., Zaccaria P., Bevan M., Wilson R.K., de la Bastide M., Habermann K., Parnell L., Dedhia N., Gnoj L., Schutz K., Huang E., Spiegel L., Sekhon M., Murray J., Sheet P., Cordes M., Abu-Threideh J., Stoneking T., Kalicki J., Graves T., Harmon G., Edwards J., Latreille P., Courtney L., Cloud J., Abbott A., Scott K., Johnson D., Minx P., Bentley D., Fulton B., Miller N., Greco T., Kemp K., Kramer J., Fulton L., Mardis E., Dante M., Pepin K., Hillier L.W., Nelson J., Spieth J., Ryan E., Andrews S., Geisel C., Layman D., Du H., Ali J., Berghoff A., Jones K., Drone K., Cotton M., Joshu C., Antonoiu B., Zidanic M., Strong C., Sun H., Lamar B., Yordan C., Ma P., Zhong J., Preston R., Vil D., Shekher M., Matero A., Shah R., Swaby I.K., O'Shaughnessy A., Rodriguez M., Hoffman J., Till S., Granat S., Shohdy N., Hasegawa A., Hameed A., Lodhi M., Johnson A., Chen E., Marra M.A., Martienssen R., McCombie W.R.
      Nature 402:769-777(1999) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. Columbia.
    2. The Arabidopsis Information Resource (TAIR)
      Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
      Cited for: GENOME REANNOTATION.
      Strain: cv. Columbia.
    3. "An unexpected plethora of trehalose biosynthesis genes in Arabidopsis thaliana."
      Leyman B., Van Dijck P., Thevelein J.M.
      Trends Plant Sci. 6:510-513(2001) [PubMed] [Europe PMC] [Abstract]
      Cited for: GENE FAMILY, NOMENCLATURE.

    Entry informationi

    Entry nameiTPS4_ARATH
    AccessioniPrimary (citable) accession number: Q9T079
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: March 18, 2008
    Last sequence update: May 1, 2000
    Last modified: October 1, 2014
    This is version 81 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programPlant Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Arabidopsis thaliana
      Arabidopsis thaliana: entries and gene names
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3