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Q9T079 (TPS4_ARATH) Reviewed, UniProtKB/Swiss-Prot

Last modified June 11, 2014. Version 80. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 4

EC=2.4.1.15
Alternative name(s):
Trehalose-6-phosphate synthase 4
Short name=AtTPS4
Gene names
Name:TPS4
Ordered Locus Names:At4g27550
ORF Names:T29A15.40
OrganismArabidopsis thaliana (Mouse-ear cress) [Reference proteome]
Taxonomic identifier3702 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis

Protein attributes

Sequence length795 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

UDP-glucose + D-glucose 6-phosphate = UDP + alpha,alpha-trehalose 6-phosphate.

Sequence similarities

In the N-terminal section; belongs to the glycosyltransferase 20 family.

In the C-terminal section; belongs to the trehalose phosphatase family.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 795795Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 4
PRO_0000324825

Regions

Region4 – 469466Glycosyltransferase

Sequences

Sequence LengthMass (Da)Tools
Q9T079 [UniParc].

Last modified May 1, 2000. Version 1.
Checksum: 4B9191CB2CE56126

FASTA79589,474
        10         20         30         40         50         60 
MARPRLLVVS MSLPVTAKRT GEESWSFTMS PGGLVSALLG LKEFETKWIG WPGVDVHDAI 

        70         80         90        100        110        120 
GKKTLSITLA EKGCIPVFLE EVCDQYYNGY CNNILWPIFH YLGTPPEYRN DATITYQSQY 

       130        140        150        160        170        180 
EAYKKANQIF FDVVKEHYEE GDVVWCHDYH VMLLPQYLKE YNSKMKVGWF LHTPFPSSEM 

       190        200        210        220        230        240 
YKTLPSRSDL LRSVLTADLV GFHTYDFARH FLNACMCILG VEATSEGIVD QGKVTRVAVF 

       250        260        270        280        290        300 
PIGIEPERFI NTSELSEVVQ YMKKFKNDFG GRKLILGVDR LDTIKGIPQK YQAFEKFLEE 

       310        320        330        340        350        360 
NAEWRGKVML LQIAVPTRNG IGEYQKIKDQ CHYHVGRING RFGSISSVPI IHLDCSIDFN 

       370        380        390        400        410        420 
QLCALYAITD VLLVTSLRDG MNLVSSEFIA CQKAEKGVLI LSEFAGAGQS LGAGAILVNP 

       430        440        450        460        470        480 
WNIKEVSSAI GEALNMSHEE KERKHKINFQ YVKTHSTQQW ADDFMKLTLT NILCSKLIEI 

       490        500        510        520        530        540 
TTSAELGAGL AATLELPEHD VIQQYSKSNN RLLILGFYGT LTQPMKNQER RGDGMNLELH 

       550        560        570        580        590        600 
PQLKERLKEL CSDPKTTVVV LSRSEKCILD KNFGEYNMWL AAENGMFLRH TSGEWVTRIP 

       610        620        630        640        650        660 
EHMNLEWIDG VKHVFKYFTE RTPGSYLETS EASLVWNYEN ADAEFGRAQA RDMLQHLWAG 

       670        680        690        700        710        720 
PISNASVDVV RGGQSVEVHA VGVTKGSAME RILGEIVHNK SMATPIDYVL CIGCFLGKDE 

       730        740        750        760        770        780 
DVYTFFEPEL TKKAKSLSSS GSDSPKKVSS TIVDLKGENY FSVAIGQTHT KARYFLDSSD 

       790 
DVVKLIGKLC THNNA 

« Hide

References

« Hide 'large scale' references
[1]"Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana."
Mayer K.F.X., Schueller C., Wambutt R., Murphy G., Volckaert G., Pohl T., Duesterhoeft A., Stiekema W., Entian K.-D., Terryn N., Harris B., Ansorge W., Brandt P., Grivell L.A., Rieger M., Weichselgartner M., de Simone V., Obermaier B. expand/collapse author list , Mache R., Mueller M., Kreis M., Delseny M., Puigdomenech P., Watson M., Schmidtheini T., Reichert B., Portetelle D., Perez-Alonso M., Boutry M., Bancroft I., Vos P., Hoheisel J., Zimmermann W., Wedler H., Ridley P., Langham S.-A., McCullagh B., Bilham L., Robben J., van der Schueren J., Grymonprez B., Chuang Y.-J., Vandenbussche F., Braeken M., Weltjens I., Voet M., Bastiaens I., Aert R., Defoor E., Weitzenegger T., Bothe G., Ramsperger U., Hilbert H., Braun M., Holzer E., Brandt A., Peters S., van Staveren M., Dirkse W., Mooijman P., Klein Lankhorst R., Rose M., Hauf J., Koetter P., Berneiser S., Hempel S., Feldpausch M., Lamberth S., Van den Daele H., De Keyser A., Buysshaert C., Gielen J., Villarroel R., De Clercq R., van Montagu M., Rogers J., Cronin A., Quail M.A., Bray-Allen S., Clark L., Doggett J., Hall S., Kay M., Lennard N., McLay K., Mayes R., Pettett A., Rajandream M.A., Lyne M., Benes V., Rechmann S., Borkova D., Bloecker H., Scharfe M., Grimm M., Loehnert T.-H., Dose S., de Haan M., Maarse A.C., Schaefer M., Mueller-Auer S., Gabel C., Fuchs M., Fartmann B., Granderath K., Dauner D., Herzl A., Neumann S., Argiriou A., Vitale D., Liguori R., Piravandi E., Massenet O., Quigley F., Clabauld G., Muendlein A., Felber R., Schnabl S., Hiller R., Schmidt W., Lecharny A., Aubourg S., Chefdor F., Cooke R., Berger C., Monfort A., Casacuberta E., Gibbons T., Weber N., Vandenbol M., Bargues M., Terol J., Torres A., Perez-Perez A., Purnelle B., Bent E., Johnson S., Tacon D., Jesse T., Heijnen L., Schwarz S., Scholler P., Heber S., Francs P., Bielke C., Frishman D., Haase D., Lemcke K., Mewes H.-W., Stocker S., Zaccaria P., Bevan M., Wilson R.K., de la Bastide M., Habermann K., Parnell L., Dedhia N., Gnoj L., Schutz K., Huang E., Spiegel L., Sekhon M., Murray J., Sheet P., Cordes M., Abu-Threideh J., Stoneking T., Kalicki J., Graves T., Harmon G., Edwards J., Latreille P., Courtney L., Cloud J., Abbott A., Scott K., Johnson D., Minx P., Bentley D., Fulton B., Miller N., Greco T., Kemp K., Kramer J., Fulton L., Mardis E., Dante M., Pepin K., Hillier L.W., Nelson J., Spieth J., Ryan E., Andrews S., Geisel C., Layman D., Du H., Ali J., Berghoff A., Jones K., Drone K., Cotton M., Joshu C., Antonoiu B., Zidanic M., Strong C., Sun H., Lamar B., Yordan C., Ma P., Zhong J., Preston R., Vil D., Shekher M., Matero A., Shah R., Swaby I.K., O'Shaughnessy A., Rodriguez M., Hoffman J., Till S., Granat S., Shohdy N., Hasegawa A., Hameed A., Lodhi M., Johnson A., Chen E., Marra M.A., Martienssen R., McCombie W.R.
Nature 402:769-777(1999) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Columbia.
[2]The Arabidopsis Information Resource (TAIR)
Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
Cited for: GENOME REANNOTATION.
Strain: cv. Columbia.
[3]"An unexpected plethora of trehalose biosynthesis genes in Arabidopsis thaliana."
Leyman B., Van Dijck P., Thevelein J.M.
Trends Plant Sci. 6:510-513(2001) [PubMed] [Europe PMC] [Abstract]
Cited for: GENE FAMILY, NOMENCLATURE.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AL035602 Genomic DNA. Translation: CAB38267.1.
AL161571 Genomic DNA. Translation: CAB81405.1.
CP002687 Genomic DNA. Translation: AEE85356.1.
PIRT05860.
RefSeqNP_194485.1. NM_118890.2.
UniGeneAt.54527.

3D structure databases

ProteinModelPortalQ9T079.
SMRQ9T079. Positions 30-465.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING3702.AT4G27550.1-P.

Protein family/group databases

CAZyGT20. Glycosyltransferase Family 20.

Proteomic databases

PRIDEQ9T079.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsAT4G27550.1; AT4G27550.1; AT4G27550.
GeneID828864.
KEGGath:AT4G27550.

Organism-specific databases

TAIRAT4G27550.

Phylogenomic databases

eggNOGCOG0380.
HOGENOMHOG000191477.
InParanoidQ9T079.
KOK16055.
OMAEPERFIN.
PhylomeDBQ9T079.

Gene expression databases

GenevestigatorQ9T079.

Family and domain databases

Gene3D3.40.50.1000. 2 hits.
InterProIPR001830. Glyco_trans_20.
IPR023214. HAD-like_dom.
IPR003337. Trehalose_PPase.
[Graphical view]
PfamPF00982. Glyco_transf_20. 1 hit.
PF02358. Trehalose_PPase. 1 hit.
[Graphical view]
SUPFAMSSF56784. SSF56784. 2 hits.
ProtoNetSearch...

Entry information

Entry nameTPS4_ARATH
AccessionPrimary (citable) accession number: Q9T079
Entry history
Integrated into UniProtKB/Swiss-Prot: March 18, 2008
Last sequence update: May 1, 2000
Last modified: June 11, 2014
This is version 80 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Arabidopsis thaliana

Arabidopsis thaliana: entries and gene names