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Q9T079

- TPS4_ARATH

UniProt

Q9T079 - TPS4_ARATH

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Protein

Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 4

Gene
TPS4, At4g27550, T29A15.40
Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Catalytic activityi

UDP-glucose + D-glucose 6-phosphate = UDP + alpha,alpha-trehalose 6-phosphate.

GO - Molecular functioni

  1. alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity Source: TAIR

GO - Biological processi

  1. trehalose biosynthetic process Source: TAIR
Complete GO annotation...

Keywords - Molecular functioni

Glycosyltransferase, Transferase

Protein family/group databases

CAZyiGT20. Glycosyltransferase Family 20.

Names & Taxonomyi

Protein namesi
Recommended name:
Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 4 (EC:2.4.1.15)
Alternative name(s):
Trehalose-6-phosphate synthase 4
Short name:
AtTPS4
Gene namesi
Name:TPS4
Ordered Locus Names:At4g27550
ORF Names:T29A15.40
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
ProteomesiUP000006548: Chromosome 4

Organism-specific databases

TAIRiAT4G27550.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 795795Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 4PRO_0000324825Add
BLAST

Proteomic databases

PRIDEiQ9T079.

Expressioni

Gene expression databases

GenevestigatoriQ9T079.

Interactioni

Protein-protein interaction databases

STRINGi3702.AT4G27550.1-P.

Structurei

3D structure databases

ProteinModelPortaliQ9T079.
SMRiQ9T079. Positions 30-465.

Family & Domainsi

Region

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Regioni4 – 469466GlycosyltransferaseAdd
BLAST

Sequence similaritiesi

In the N-terminal section; belongs to the glycosyltransferase 20 family.
In the C-terminal section; belongs to the trehalose phosphatase family.

Phylogenomic databases

eggNOGiCOG0380.
HOGENOMiHOG000191477.
InParanoidiQ9T079.
KOiK16055.
OMAiEPERFIN.
PhylomeDBiQ9T079.

Family and domain databases

Gene3Di3.40.50.1000. 2 hits.
InterProiIPR001830. Glyco_trans_20.
IPR023214. HAD-like_dom.
IPR003337. Trehalose_PPase.
[Graphical view]
PfamiPF00982. Glyco_transf_20. 1 hit.
PF02358. Trehalose_PPase. 1 hit.
[Graphical view]
SUPFAMiSSF56784. SSF56784. 2 hits.

Sequencei

Sequence statusi: Complete.

Q9T079-1 [UniParc]FASTAAdd to Basket

« Hide

MARPRLLVVS MSLPVTAKRT GEESWSFTMS PGGLVSALLG LKEFETKWIG    50
WPGVDVHDAI GKKTLSITLA EKGCIPVFLE EVCDQYYNGY CNNILWPIFH 100
YLGTPPEYRN DATITYQSQY EAYKKANQIF FDVVKEHYEE GDVVWCHDYH 150
VMLLPQYLKE YNSKMKVGWF LHTPFPSSEM YKTLPSRSDL LRSVLTADLV 200
GFHTYDFARH FLNACMCILG VEATSEGIVD QGKVTRVAVF PIGIEPERFI 250
NTSELSEVVQ YMKKFKNDFG GRKLILGVDR LDTIKGIPQK YQAFEKFLEE 300
NAEWRGKVML LQIAVPTRNG IGEYQKIKDQ CHYHVGRING RFGSISSVPI 350
IHLDCSIDFN QLCALYAITD VLLVTSLRDG MNLVSSEFIA CQKAEKGVLI 400
LSEFAGAGQS LGAGAILVNP WNIKEVSSAI GEALNMSHEE KERKHKINFQ 450
YVKTHSTQQW ADDFMKLTLT NILCSKLIEI TTSAELGAGL AATLELPEHD 500
VIQQYSKSNN RLLILGFYGT LTQPMKNQER RGDGMNLELH PQLKERLKEL 550
CSDPKTTVVV LSRSEKCILD KNFGEYNMWL AAENGMFLRH TSGEWVTRIP 600
EHMNLEWIDG VKHVFKYFTE RTPGSYLETS EASLVWNYEN ADAEFGRAQA 650
RDMLQHLWAG PISNASVDVV RGGQSVEVHA VGVTKGSAME RILGEIVHNK 700
SMATPIDYVL CIGCFLGKDE DVYTFFEPEL TKKAKSLSSS GSDSPKKVSS 750
TIVDLKGENY FSVAIGQTHT KARYFLDSSD DVVKLIGKLC THNNA 795
Length:795
Mass (Da):89,474
Last modified:May 1, 2000 - v1
Checksum:i4B9191CB2CE56126
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AL035602 Genomic DNA. Translation: CAB38267.1.
AL161571 Genomic DNA. Translation: CAB81405.1.
CP002687 Genomic DNA. Translation: AEE85356.1.
PIRiT05860.
RefSeqiNP_194485.1. NM_118890.2.
UniGeneiAt.54527.

Genome annotation databases

EnsemblPlantsiAT4G27550.1; AT4G27550.1; AT4G27550.
GeneIDi828864.
KEGGiath:AT4G27550.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AL035602 Genomic DNA. Translation: CAB38267.1 .
AL161571 Genomic DNA. Translation: CAB81405.1 .
CP002687 Genomic DNA. Translation: AEE85356.1 .
PIRi T05860.
RefSeqi NP_194485.1. NM_118890.2.
UniGenei At.54527.

3D structure databases

ProteinModelPortali Q9T079.
SMRi Q9T079. Positions 30-465.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 3702.AT4G27550.1-P.

Protein family/group databases

CAZyi GT20. Glycosyltransferase Family 20.

Proteomic databases

PRIDEi Q9T079.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblPlantsi AT4G27550.1 ; AT4G27550.1 ; AT4G27550 .
GeneIDi 828864.
KEGGi ath:AT4G27550.

Organism-specific databases

TAIRi AT4G27550.

Phylogenomic databases

eggNOGi COG0380.
HOGENOMi HOG000191477.
InParanoidi Q9T079.
KOi K16055.
OMAi EPERFIN.
PhylomeDBi Q9T079.

Gene expression databases

Genevestigatori Q9T079.

Family and domain databases

Gene3Di 3.40.50.1000. 2 hits.
InterProi IPR001830. Glyco_trans_20.
IPR023214. HAD-like_dom.
IPR003337. Trehalose_PPase.
[Graphical view ]
Pfami PF00982. Glyco_transf_20. 1 hit.
PF02358. Trehalose_PPase. 1 hit.
[Graphical view ]
SUPFAMi SSF56784. SSF56784. 2 hits.
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana."
    Mayer K.F.X., Schueller C., Wambutt R., Murphy G., Volckaert G., Pohl T., Duesterhoeft A., Stiekema W., Entian K.-D., Terryn N., Harris B., Ansorge W., Brandt P., Grivell L.A., Rieger M., Weichselgartner M., de Simone V., Obermaier B.
    , Mache R., Mueller M., Kreis M., Delseny M., Puigdomenech P., Watson M., Schmidtheini T., Reichert B., Portetelle D., Perez-Alonso M., Boutry M., Bancroft I., Vos P., Hoheisel J., Zimmermann W., Wedler H., Ridley P., Langham S.-A., McCullagh B., Bilham L., Robben J., van der Schueren J., Grymonprez B., Chuang Y.-J., Vandenbussche F., Braeken M., Weltjens I., Voet M., Bastiaens I., Aert R., Defoor E., Weitzenegger T., Bothe G., Ramsperger U., Hilbert H., Braun M., Holzer E., Brandt A., Peters S., van Staveren M., Dirkse W., Mooijman P., Klein Lankhorst R., Rose M., Hauf J., Koetter P., Berneiser S., Hempel S., Feldpausch M., Lamberth S., Van den Daele H., De Keyser A., Buysshaert C., Gielen J., Villarroel R., De Clercq R., van Montagu M., Rogers J., Cronin A., Quail M.A., Bray-Allen S., Clark L., Doggett J., Hall S., Kay M., Lennard N., McLay K., Mayes R., Pettett A., Rajandream M.A., Lyne M., Benes V., Rechmann S., Borkova D., Bloecker H., Scharfe M., Grimm M., Loehnert T.-H., Dose S., de Haan M., Maarse A.C., Schaefer M., Mueller-Auer S., Gabel C., Fuchs M., Fartmann B., Granderath K., Dauner D., Herzl A., Neumann S., Argiriou A., Vitale D., Liguori R., Piravandi E., Massenet O., Quigley F., Clabauld G., Muendlein A., Felber R., Schnabl S., Hiller R., Schmidt W., Lecharny A., Aubourg S., Chefdor F., Cooke R., Berger C., Monfort A., Casacuberta E., Gibbons T., Weber N., Vandenbol M., Bargues M., Terol J., Torres A., Perez-Perez A., Purnelle B., Bent E., Johnson S., Tacon D., Jesse T., Heijnen L., Schwarz S., Scholler P., Heber S., Francs P., Bielke C., Frishman D., Haase D., Lemcke K., Mewes H.-W., Stocker S., Zaccaria P., Bevan M., Wilson R.K., de la Bastide M., Habermann K., Parnell L., Dedhia N., Gnoj L., Schutz K., Huang E., Spiegel L., Sekhon M., Murray J., Sheet P., Cordes M., Abu-Threideh J., Stoneking T., Kalicki J., Graves T., Harmon G., Edwards J., Latreille P., Courtney L., Cloud J., Abbott A., Scott K., Johnson D., Minx P., Bentley D., Fulton B., Miller N., Greco T., Kemp K., Kramer J., Fulton L., Mardis E., Dante M., Pepin K., Hillier L.W., Nelson J., Spieth J., Ryan E., Andrews S., Geisel C., Layman D., Du H., Ali J., Berghoff A., Jones K., Drone K., Cotton M., Joshu C., Antonoiu B., Zidanic M., Strong C., Sun H., Lamar B., Yordan C., Ma P., Zhong J., Preston R., Vil D., Shekher M., Matero A., Shah R., Swaby I.K., O'Shaughnessy A., Rodriguez M., Hoffman J., Till S., Granat S., Shohdy N., Hasegawa A., Hameed A., Lodhi M., Johnson A., Chen E., Marra M.A., Martienssen R., McCombie W.R.
    Nature 402:769-777(1999) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Columbia.
  2. The Arabidopsis Information Resource (TAIR)
    Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: GENOME REANNOTATION.
    Strain: cv. Columbia.
  3. "An unexpected plethora of trehalose biosynthesis genes in Arabidopsis thaliana."
    Leyman B., Van Dijck P., Thevelein J.M.
    Trends Plant Sci. 6:510-513(2001) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENE FAMILY, NOMENCLATURE.

Entry informationi

Entry nameiTPS4_ARATH
AccessioniPrimary (citable) accession number: Q9T079
Entry historyi
Integrated into UniProtKB/Swiss-Prot: March 18, 2008
Last sequence update: May 1, 2000
Last modified: June 11, 2014
This is version 80 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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