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Q9T079

- TPS4_ARATH

UniProt

Q9T079 - TPS4_ARATH

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Protein

Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 4

Gene

TPS4

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Catalytic activityi

UDP-glucose + D-glucose 6-phosphate = UDP + alpha,alpha-trehalose 6-phosphate.

GO - Molecular functioni

  1. alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity Source: TAIR

GO - Biological processi

  1. trehalose biosynthetic process Source: TAIR
Complete GO annotation...

Keywords - Molecular functioni

Glycosyltransferase, Transferase

Protein family/group databases

CAZyiGT20. Glycosyltransferase Family 20.

Names & Taxonomyi

Protein namesi
Recommended name:
Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 4 (EC:2.4.1.15)
Alternative name(s):
Trehalose-6-phosphate synthase 4
Short name:
AtTPS4
Gene namesi
Name:TPS4
Ordered Locus Names:At4g27550
ORF Names:T29A15.40
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
ProteomesiUP000006548: Chromosome 4

Organism-specific databases

TAIRiAT4G27550.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 795795Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 4PRO_0000324825Add
BLAST

Proteomic databases

PRIDEiQ9T079.

Expressioni

Gene expression databases

GenevestigatoriQ9T079.

Interactioni

Protein-protein interaction databases

STRINGi3702.AT4G27550.1-P.

Structurei

3D structure databases

ProteinModelPortaliQ9T079.
SMRiQ9T079. Positions 30-465.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Region

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Regioni4 – 469466GlycosyltransferaseAdd
BLAST

Sequence similaritiesi

In the N-terminal section; belongs to the glycosyltransferase 20 family.Curated
In the C-terminal section; belongs to the trehalose phosphatase family.Curated

Phylogenomic databases

eggNOGiCOG0380.
HOGENOMiHOG000191477.
InParanoidiQ9T079.
KOiK16055.
OMAiEPERFIN.
PhylomeDBiQ9T079.

Family and domain databases

Gene3Di3.40.50.1000. 2 hits.
InterProiIPR001830. Glyco_trans_20.
IPR023214. HAD-like_dom.
IPR003337. Trehalose_PPase.
[Graphical view]
PfamiPF00982. Glyco_transf_20. 1 hit.
PF02358. Trehalose_PPase. 1 hit.
[Graphical view]
SUPFAMiSSF56784. SSF56784. 2 hits.

Sequencei

Sequence statusi: Complete.

Q9T079-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MARPRLLVVS MSLPVTAKRT GEESWSFTMS PGGLVSALLG LKEFETKWIG
60 70 80 90 100
WPGVDVHDAI GKKTLSITLA EKGCIPVFLE EVCDQYYNGY CNNILWPIFH
110 120 130 140 150
YLGTPPEYRN DATITYQSQY EAYKKANQIF FDVVKEHYEE GDVVWCHDYH
160 170 180 190 200
VMLLPQYLKE YNSKMKVGWF LHTPFPSSEM YKTLPSRSDL LRSVLTADLV
210 220 230 240 250
GFHTYDFARH FLNACMCILG VEATSEGIVD QGKVTRVAVF PIGIEPERFI
260 270 280 290 300
NTSELSEVVQ YMKKFKNDFG GRKLILGVDR LDTIKGIPQK YQAFEKFLEE
310 320 330 340 350
NAEWRGKVML LQIAVPTRNG IGEYQKIKDQ CHYHVGRING RFGSISSVPI
360 370 380 390 400
IHLDCSIDFN QLCALYAITD VLLVTSLRDG MNLVSSEFIA CQKAEKGVLI
410 420 430 440 450
LSEFAGAGQS LGAGAILVNP WNIKEVSSAI GEALNMSHEE KERKHKINFQ
460 470 480 490 500
YVKTHSTQQW ADDFMKLTLT NILCSKLIEI TTSAELGAGL AATLELPEHD
510 520 530 540 550
VIQQYSKSNN RLLILGFYGT LTQPMKNQER RGDGMNLELH PQLKERLKEL
560 570 580 590 600
CSDPKTTVVV LSRSEKCILD KNFGEYNMWL AAENGMFLRH TSGEWVTRIP
610 620 630 640 650
EHMNLEWIDG VKHVFKYFTE RTPGSYLETS EASLVWNYEN ADAEFGRAQA
660 670 680 690 700
RDMLQHLWAG PISNASVDVV RGGQSVEVHA VGVTKGSAME RILGEIVHNK
710 720 730 740 750
SMATPIDYVL CIGCFLGKDE DVYTFFEPEL TKKAKSLSSS GSDSPKKVSS
760 770 780 790
TIVDLKGENY FSVAIGQTHT KARYFLDSSD DVVKLIGKLC THNNA
Length:795
Mass (Da):89,474
Last modified:May 1, 2000 - v1
Checksum:i4B9191CB2CE56126
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AL035602 Genomic DNA. Translation: CAB38267.1.
AL161571 Genomic DNA. Translation: CAB81405.1.
CP002687 Genomic DNA. Translation: AEE85356.1.
PIRiT05860.
RefSeqiNP_194485.1. NM_118890.2.
UniGeneiAt.54527.

Genome annotation databases

EnsemblPlantsiAT4G27550.1; AT4G27550.1; AT4G27550.
GeneIDi828864.
KEGGiath:AT4G27550.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AL035602 Genomic DNA. Translation: CAB38267.1 .
AL161571 Genomic DNA. Translation: CAB81405.1 .
CP002687 Genomic DNA. Translation: AEE85356.1 .
PIRi T05860.
RefSeqi NP_194485.1. NM_118890.2.
UniGenei At.54527.

3D structure databases

ProteinModelPortali Q9T079.
SMRi Q9T079. Positions 30-465.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 3702.AT4G27550.1-P.

Protein family/group databases

CAZyi GT20. Glycosyltransferase Family 20.

Proteomic databases

PRIDEi Q9T079.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblPlantsi AT4G27550.1 ; AT4G27550.1 ; AT4G27550 .
GeneIDi 828864.
KEGGi ath:AT4G27550.

Organism-specific databases

TAIRi AT4G27550.

Phylogenomic databases

eggNOGi COG0380.
HOGENOMi HOG000191477.
InParanoidi Q9T079.
KOi K16055.
OMAi EPERFIN.
PhylomeDBi Q9T079.

Gene expression databases

Genevestigatori Q9T079.

Family and domain databases

Gene3Di 3.40.50.1000. 2 hits.
InterProi IPR001830. Glyco_trans_20.
IPR023214. HAD-like_dom.
IPR003337. Trehalose_PPase.
[Graphical view ]
Pfami PF00982. Glyco_transf_20. 1 hit.
PF02358. Trehalose_PPase. 1 hit.
[Graphical view ]
SUPFAMi SSF56784. SSF56784. 2 hits.
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana."
    Mayer K.F.X., Schueller C., Wambutt R., Murphy G., Volckaert G., Pohl T., Duesterhoeft A., Stiekema W., Entian K.-D., Terryn N., Harris B., Ansorge W., Brandt P., Grivell L.A., Rieger M., Weichselgartner M., de Simone V., Obermaier B.
    , Mache R., Mueller M., Kreis M., Delseny M., Puigdomenech P., Watson M., Schmidtheini T., Reichert B., Portetelle D., Perez-Alonso M., Boutry M., Bancroft I., Vos P., Hoheisel J., Zimmermann W., Wedler H., Ridley P., Langham S.-A., McCullagh B., Bilham L., Robben J., van der Schueren J., Grymonprez B., Chuang Y.-J., Vandenbussche F., Braeken M., Weltjens I., Voet M., Bastiaens I., Aert R., Defoor E., Weitzenegger T., Bothe G., Ramsperger U., Hilbert H., Braun M., Holzer E., Brandt A., Peters S., van Staveren M., Dirkse W., Mooijman P., Klein Lankhorst R., Rose M., Hauf J., Koetter P., Berneiser S., Hempel S., Feldpausch M., Lamberth S., Van den Daele H., De Keyser A., Buysshaert C., Gielen J., Villarroel R., De Clercq R., van Montagu M., Rogers J., Cronin A., Quail M.A., Bray-Allen S., Clark L., Doggett J., Hall S., Kay M., Lennard N., McLay K., Mayes R., Pettett A., Rajandream M.A., Lyne M., Benes V., Rechmann S., Borkova D., Bloecker H., Scharfe M., Grimm M., Loehnert T.-H., Dose S., de Haan M., Maarse A.C., Schaefer M., Mueller-Auer S., Gabel C., Fuchs M., Fartmann B., Granderath K., Dauner D., Herzl A., Neumann S., Argiriou A., Vitale D., Liguori R., Piravandi E., Massenet O., Quigley F., Clabauld G., Muendlein A., Felber R., Schnabl S., Hiller R., Schmidt W., Lecharny A., Aubourg S., Chefdor F., Cooke R., Berger C., Monfort A., Casacuberta E., Gibbons T., Weber N., Vandenbol M., Bargues M., Terol J., Torres A., Perez-Perez A., Purnelle B., Bent E., Johnson S., Tacon D., Jesse T., Heijnen L., Schwarz S., Scholler P., Heber S., Francs P., Bielke C., Frishman D., Haase D., Lemcke K., Mewes H.-W., Stocker S., Zaccaria P., Bevan M., Wilson R.K., de la Bastide M., Habermann K., Parnell L., Dedhia N., Gnoj L., Schutz K., Huang E., Spiegel L., Sekhon M., Murray J., Sheet P., Cordes M., Abu-Threideh J., Stoneking T., Kalicki J., Graves T., Harmon G., Edwards J., Latreille P., Courtney L., Cloud J., Abbott A., Scott K., Johnson D., Minx P., Bentley D., Fulton B., Miller N., Greco T., Kemp K., Kramer J., Fulton L., Mardis E., Dante M., Pepin K., Hillier L.W., Nelson J., Spieth J., Ryan E., Andrews S., Geisel C., Layman D., Du H., Ali J., Berghoff A., Jones K., Drone K., Cotton M., Joshu C., Antonoiu B., Zidanic M., Strong C., Sun H., Lamar B., Yordan C., Ma P., Zhong J., Preston R., Vil D., Shekher M., Matero A., Shah R., Swaby I.K., O'Shaughnessy A., Rodriguez M., Hoffman J., Till S., Granat S., Shohdy N., Hasegawa A., Hameed A., Lodhi M., Johnson A., Chen E., Marra M.A., Martienssen R., McCombie W.R.
    Nature 402:769-777(1999) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Columbia.
  2. The Arabidopsis Information Resource (TAIR)
    Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: GENOME REANNOTATION.
    Strain: cv. Columbia.
  3. "An unexpected plethora of trehalose biosynthesis genes in Arabidopsis thaliana."
    Leyman B., Van Dijck P., Thevelein J.M.
    Trends Plant Sci. 6:510-513(2001) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENE FAMILY, NOMENCLATURE.

Entry informationi

Entry nameiTPS4_ARATH
AccessioniPrimary (citable) accession number: Q9T079
Entry historyi
Integrated into UniProtKB/Swiss-Prot: March 18, 2008
Last sequence update: May 1, 2000
Last modified: October 1, 2014
This is version 81 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3