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Protein

G-type lectin S-receptor-like serine/threonine-protein kinase At4g11900

Gene

At4g11900

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: Annotation score: 4 out of 5-Experimental evidence at transcript leveli

Functioni

Catalytic activityi

ATP + a protein = ADP + a phosphoprotein.

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei565 – 5651ATPPROSITE-ProRule annotation
Active sitei662 – 6621Proton acceptorPROSITE-ProRule annotation

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Nucleotide bindingi543 – 5519ATPPROSITE-ProRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Kinase, Receptor, Serine/threonine-protein kinase, Transferase

Keywords - Ligandi

ATP-binding, Lectin, Nucleotide-binding

Enzyme and pathway databases

BioCyciARA:AT4G11900-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
G-type lectin S-receptor-like serine/threonine-protein kinase At4g11900 (EC:2.7.11.1)
Gene namesi
Ordered Locus Names:At4g11900
ORF Names:T26M18.110
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 4

Organism-specific databases

TAIRiAT4G11900.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Topological domaini27 – 466440ExtracellularSequence analysisAdd
BLAST
Transmembranei467 – 48721HelicalSequence analysisAdd
BLAST
Topological domaini488 – 849362CytoplasmicSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2626Sequence analysisAdd
BLAST
Chaini27 – 849823G-type lectin S-receptor-like serine/threonine-protein kinase At4g11900PRO_0000401327Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Glycosylationi111 – 1111N-linked (GlcNAc...)Sequence analysis
Glycosylationi148 – 1481N-linked (GlcNAc...)Sequence analysis
Glycosylationi172 – 1721N-linked (GlcNAc...)Sequence analysis
Glycosylationi232 – 2321N-linked (GlcNAc...)Sequence analysis
Disulfide bondi315 ↔ 327By similarity
Disulfide bondi321 ↔ 336By similarity
Disulfide bondi401 ↔ 421By similarity
Disulfide bondi405 ↔ 411By similarity
Glycosylationi450 – 4501N-linked (GlcNAc...)Sequence analysis
Modified residuei666 – 6661PhosphoserineBy similarity
Modified residuei679 – 6791PhosphoserineBy similarity
Modified residuei696 – 6961PhosphothreonineBy similarity

Keywords - PTMi

Disulfide bond, Glycoprotein, Phosphoprotein

Proteomic databases

PaxDbiQ9T058.
PRIDEiQ9T058.

Expressioni

Gene expression databases

GenevisibleiQ9T058. AT.

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRINGi3702.AT4G11900.1.

Structurei

3D structure databases

ProteinModelPortaliQ9T058.
SMRiQ9T058. Positions 496-846.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini27 – 180154Bulb-type lectinPROSITE-ProRule annotationAdd
BLAST
Domaini311 – 34838EGF-likeAdd
BLAST
Domaini368 – 44780PANPROSITE-ProRule annotationAdd
BLAST
Domaini537 – 822286Protein kinasePROSITE-ProRule annotationAdd
BLAST

Region

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Regioni626 – 64318CaM-bindingBy similarityAdd
BLAST

Sequence similaritiesi

Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.PROSITE-ProRule annotation
Contains 1 bulb-type lectin domain.PROSITE-ProRule annotation
Contains 1 EGF-like domain.Curated
Contains 1 PAN domain.PROSITE-ProRule annotation
Contains 1 protein kinase domain.PROSITE-ProRule annotation

Keywords - Domaini

EGF-like domain, Signal, Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiCOG0515. LUCA.
HOGENOMiHOG000116559.
InParanoidiQ9T058.
OMAiFNGEMAV.
PhylomeDBiQ9T058.

Family and domain databases

Gene3Di2.60.120.200. 1 hit.
2.90.10.10. 1 hit.
InterProiIPR001480. Bulb-type_lectin_dom.
IPR013320. ConA-like_dom.
IPR011009. Kinase-like_dom.
IPR003609. Pan_app.
IPR000719. Prot_kinase_dom.
IPR000858. S_locus_glycoprot_dom.
IPR008271. Ser/Thr_kinase_AS.
IPR024171. SRK-like_kinase.
[Graphical view]
PfamiPF01453. B_lectin. 1 hit.
PF08276. PAN_2. 1 hit.
PF00069. Pkinase. 1 hit.
PF00954. S_locus_glycop. 1 hit.
[Graphical view]
PIRSFiPIRSF000641. SRK. 1 hit.
SMARTiSM00108. B_lectin. 1 hit.
SM00473. PAN_AP. 1 hit.
SM00220. S_TKc. 1 hit.
[Graphical view]
SUPFAMiSSF51110. SSF51110. 2 hits.
SSF56112. SSF56112. 1 hit.
PROSITEiPS50927. BULB_LECTIN. 1 hit.
PS50948. PAN. 1 hit.
PS50011. PROTEIN_KINASE_DOM. 1 hit.
PS00108. PROTEIN_KINASE_ST. 1 hit.
[Graphical view]

Sequences (2)i

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

This entry describes 2 isoformsi produced by alternative splicing. AlignAdd to basket

Isoform 1 (identifier: Q9T058-1) [UniParc]FASTAAdd to basket

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide

        10         20         30         40         50
MQICKKNVFL LYYGVLVFLS FQVSSSTDTI STNQPLSGFE TIVSSGDIFE
60 70 80 90 100
LGLFTPTPDT YDHRNYYIGM WYRHVSPQTI VWVANRESPL GGDASTYLLK
110 120 130 140 150
ILDGNLILHD NISATRKSHT EGTSRRSPQK ISEGNLLFHE TVWSTGVNSS
160 170 180 190 200
MSKDVQAVLF DSGNLVLRDG PNSSAAVLWQ SFDHPSDTWL PGGKIRLGSQ
210 220 230 240 250
LFTSWESLID PSPGRYSLEF DPKLHSLVTV WNRSKSYWSS GPLYDWLQSF
260 270 280 290 300
KGFPELQGTK LSFTLNMDES YITFSVDPQS RYRLVMGVSG QFMLQVWHVD
310 320 330 340 350
LQSWRVILSQ PDNRCDVYNS CGSFGICNEN REPPPCRCVP GFKREFSQGS
360 370 380 390 400
DDSNDYSGGC KRETYLHCYK RNDEFLPIEN MKLATDPTTA SVLTSGTFRT
410 420 430 440 450
CASRCVADCS CQAYANDGNK CLVWTKDAFN LQQLDANKGH TFFLRLASSN
460 470 480 490 500
ISTANNRKTE HSKGKSIVLP LVLASLVATA ACFVGLYCCI SSRIRRKKKQ
510 520 530 540 550
RDEKHSRELL EGGLIDDAGE NMCYLNLHDI MVATNSFSRK KKLGEGGFGP
560 570 580 590 600
VYKGKLPNGM EVAIKRLSKK SSQGLTEFKN EVVLIIKLQH KNLVRLLGYC
610 620 630 640 650
VEGDEKLLIY EYMSNKSLDG LLFDSLKSRE LDWETRMKIV NGTTRGLQYL
660 670 680 690 700
HEYSRLRIIH RDLKASNILL DDEMNPKISD FGTARIFGCK QIDDSTQRIV
710 720 730 740 750
GTFGYMSPEY ALGGVISEKS DIYSFGVLLL EIISGKKATR FVHNDQKHSL
760 770 780 790 800
IAYEWESWCE TKGVSIIDEP MCCSYSLEEA MRCIHIALLC VQDHPKDRPM
810 820 830 840
ISQIVYMLSN DNTLPIPKQP TFSNVLNGDQ QLDYVFSINE ATQTELEAR
Note: Derived from EST data. No experimental confirmation available.
Length:849
Mass (Da):95,816
Last modified:May 1, 2000 - v1
Checksum:iE7D3DA5D0CA5D3DE
GO
Isoform 2 (identifier: Q9T058-2) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     624-626: DSL → GEW
     627-849: Missing.

Note: No experimental confirmation available.
Show »
Length:626
Mass (Da):70,343
Checksum:i57F181F47A8DD258
GO

Alternative sequence

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Alternative sequencei624 – 6263DSL → GEW in isoform 2. 1 PublicationVSP_040157
Alternative sequencei627 – 849223Missing in isoform 2. 1 PublicationVSP_040158Add
BLAST

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL078606 Genomic DNA. Translation: CAB44328.1.
AL161533 Genomic DNA. Translation: CAB78233.1.
CP002687 Genomic DNA. Translation: AEE83067.1.
AK175437 mRNA. Translation: BAD43200.1.
PIRiT09349.
RefSeqiNP_192927.5. NM_117260.7. [Q9T058-1]
UniGeneiAt.63693.

Genome annotation databases

EnsemblPlantsiAT4G11900.1; AT4G11900.1; AT4G11900. [Q9T058-1]
GeneIDi826797.
KEGGiath:AT4G11900.

Keywords - Coding sequence diversityi

Alternative splicing

Cross-referencesi

Web resourcesi

PlantP kinase Classification PPC

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL078606 Genomic DNA. Translation: CAB44328.1.
AL161533 Genomic DNA. Translation: CAB78233.1.
CP002687 Genomic DNA. Translation: AEE83067.1.
AK175437 mRNA. Translation: BAD43200.1.
PIRiT09349.
RefSeqiNP_192927.5. NM_117260.7. [Q9T058-1]
UniGeneiAt.63693.

3D structure databases

ProteinModelPortaliQ9T058.
SMRiQ9T058. Positions 496-846.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi3702.AT4G11900.1.

Proteomic databases

PaxDbiQ9T058.
PRIDEiQ9T058.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT4G11900.1; AT4G11900.1; AT4G11900. [Q9T058-1]
GeneIDi826797.
KEGGiath:AT4G11900.

Organism-specific databases

TAIRiAT4G11900.

Phylogenomic databases

eggNOGiCOG0515. LUCA.
HOGENOMiHOG000116559.
InParanoidiQ9T058.
OMAiFNGEMAV.
PhylomeDBiQ9T058.

Enzyme and pathway databases

BioCyciARA:AT4G11900-MONOMER.

Miscellaneous databases

PROiQ9T058.

Gene expression databases

GenevisibleiQ9T058. AT.

Family and domain databases

Gene3Di2.60.120.200. 1 hit.
2.90.10.10. 1 hit.
InterProiIPR001480. Bulb-type_lectin_dom.
IPR013320. ConA-like_dom.
IPR011009. Kinase-like_dom.
IPR003609. Pan_app.
IPR000719. Prot_kinase_dom.
IPR000858. S_locus_glycoprot_dom.
IPR008271. Ser/Thr_kinase_AS.
IPR024171. SRK-like_kinase.
[Graphical view]
PfamiPF01453. B_lectin. 1 hit.
PF08276. PAN_2. 1 hit.
PF00069. Pkinase. 1 hit.
PF00954. S_locus_glycop. 1 hit.
[Graphical view]
PIRSFiPIRSF000641. SRK. 1 hit.
SMARTiSM00108. B_lectin. 1 hit.
SM00473. PAN_AP. 1 hit.
SM00220. S_TKc. 1 hit.
[Graphical view]
SUPFAMiSSF51110. SSF51110. 2 hits.
SSF56112. SSF56112. 1 hit.
PROSITEiPS50927. BULB_LECTIN. 1 hit.
PS50948. PAN. 1 hit.
PS50011. PROTEIN_KINASE_DOM. 1 hit.
PS00108. PROTEIN_KINASE_ST. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana."
    Mayer K.F.X., Schueller C., Wambutt R., Murphy G., Volckaert G., Pohl T., Duesterhoeft A., Stiekema W., Entian K.-D., Terryn N., Harris B., Ansorge W., Brandt P., Grivell L.A., Rieger M., Weichselgartner M., de Simone V., Obermaier B.
    , Mache R., Mueller M., Kreis M., Delseny M., Puigdomenech P., Watson M., Schmidtheini T., Reichert B., Portetelle D., Perez-Alonso M., Boutry M., Bancroft I., Vos P., Hoheisel J., Zimmermann W., Wedler H., Ridley P., Langham S.-A., McCullagh B., Bilham L., Robben J., van der Schueren J., Grymonprez B., Chuang Y.-J., Vandenbussche F., Braeken M., Weltjens I., Voet M., Bastiaens I., Aert R., Defoor E., Weitzenegger T., Bothe G., Ramsperger U., Hilbert H., Braun M., Holzer E., Brandt A., Peters S., van Staveren M., Dirkse W., Mooijman P., Klein Lankhorst R., Rose M., Hauf J., Koetter P., Berneiser S., Hempel S., Feldpausch M., Lamberth S., Van den Daele H., De Keyser A., Buysshaert C., Gielen J., Villarroel R., De Clercq R., van Montagu M., Rogers J., Cronin A., Quail M.A., Bray-Allen S., Clark L., Doggett J., Hall S., Kay M., Lennard N., McLay K., Mayes R., Pettett A., Rajandream M.A., Lyne M., Benes V., Rechmann S., Borkova D., Bloecker H., Scharfe M., Grimm M., Loehnert T.-H., Dose S., de Haan M., Maarse A.C., Schaefer M., Mueller-Auer S., Gabel C., Fuchs M., Fartmann B., Granderath K., Dauner D., Herzl A., Neumann S., Argiriou A., Vitale D., Liguori R., Piravandi E., Massenet O., Quigley F., Clabauld G., Muendlein A., Felber R., Schnabl S., Hiller R., Schmidt W., Lecharny A., Aubourg S., Chefdor F., Cooke R., Berger C., Monfort A., Casacuberta E., Gibbons T., Weber N., Vandenbol M., Bargues M., Terol J., Torres A., Perez-Perez A., Purnelle B., Bent E., Johnson S., Tacon D., Jesse T., Heijnen L., Schwarz S., Scholler P., Heber S., Francs P., Bielke C., Frishman D., Haase D., Lemcke K., Mewes H.-W., Stocker S., Zaccaria P., Bevan M., Wilson R.K., de la Bastide M., Habermann K., Parnell L., Dedhia N., Gnoj L., Schutz K., Huang E., Spiegel L., Sekhon M., Murray J., Sheet P., Cordes M., Abu-Threideh J., Stoneking T., Kalicki J., Graves T., Harmon G., Edwards J., Latreille P., Courtney L., Cloud J., Abbott A., Scott K., Johnson D., Minx P., Bentley D., Fulton B., Miller N., Greco T., Kemp K., Kramer J., Fulton L., Mardis E., Dante M., Pepin K., Hillier L.W., Nelson J., Spieth J., Ryan E., Andrews S., Geisel C., Layman D., Du H., Ali J., Berghoff A., Jones K., Drone K., Cotton M., Joshu C., Antonoiu B., Zidanic M., Strong C., Sun H., Lamar B., Yordan C., Ma P., Zhong J., Preston R., Vil D., Shekher M., Matero A., Shah R., Swaby I.K., O'Shaughnessy A., Rodriguez M., Hoffman J., Till S., Granat S., Shohdy N., Hasegawa A., Hameed A., Lodhi M., Johnson A., Chen E., Marra M.A., Martienssen R., McCombie W.R.
    Nature 402:769-777(1999) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Columbia.
  2. The Arabidopsis Information Resource (TAIR)
    Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: GENOME REANNOTATION.
    Strain: cv. Columbia.
  3. "Large-scale analysis of RIKEN Arabidopsis full-length (RAFL) cDNAs."
    Totoki Y., Seki M., Ishida J., Nakajima M., Enju A., Kamiya A., Narusaka M., Shin-i T., Nakagawa M., Sakamoto N., Oishi K., Kohara Y., Kobayashi M., Toyoda A., Sakaki Y., Sakurai T., Iida K., Akiyama K.
    , Satou M., Toyoda T., Konagaya A., Carninci P., Kawai J., Hayashizaki Y., Shinozaki K.
    Submitted (SEP-2004) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 2).
    Strain: cv. Columbia.

Entry informationi

Entry nameiY4119_ARATH
AccessioniPrimary (citable) accession number: Q9T058
Secondary accession number(s): Q682D0
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 30, 2010
Last sequence update: May 1, 2000
Last modified: May 11, 2016
This is version 116 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.