Q9SZK4 (Q9SZK4_ARATH) Unreviewed, UniProtKB/TrEMBL
Last modified
January 25, 2012.
Version 56.
History...
Names and origin
| Protein names | Submitted name: Exostosin family protein EMBL AEE86866.1 Submitted name: Putative uncharacterized protein AT4g38040 EMBL CAB80469.1 Submitted name: Putative uncharacterized protein At4g38040 EMBL AAK93666.1 Submitted name: Putative uncharacterized protein F20D10.160 EMBL CAB37544.1 | ||||||||
| Gene names |
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| Organism | Arabidopsis thaliana (Mouse-ear cress) EMBL CAB37544.1 | ||||||||
| Taxonomic identifier | 3702 [NCBI] | ||||||||
| Taxonomic lineage | Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › malvids › Brassicales › Brassicaceae › Camelineae › Arabidopsis |
Protein attributes
| Sequence length | 425 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at transcript level |
Ontologies
| Keywords | |
|---|---|
| Technical term | Complete proteome Reference proteome |
| Gene Ontology (GO) | |
| Cellular component | membrane Inferred from electronic annotation. Source: InterPro |
| Complete GO annotation... | |
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana." EU, CSHL and WU Arabidopsis Sequencing Project Mayer K.F.X., Schueller C., Wambutt R., Murphy G., Volckaert G., Pohl T., Duesterhoeft A., Stiekema W., Entian K.-D., Terryn N., Harris B., Ansorge W., Brandt P., Grivell L.A., Rieger M., Weichselgartner M., de Simone V., Obermaier B. McCombie W.R.Nature 402:769-777(1999) [PubMed: 10617198] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Columbia. |
| [2] | "Arabidopsis Full Length cDNA Clones." Yamada K., Liu S.X., Sakano H., Pham P.K., Banh J., Chung M.K., Goldsmith A.D., Lee J.M., Quach H.L., Toriumi M., Yu G., Bowser L., Carninci P., Chen H., Cheuk R., Hayashizaki Y., Ishida J., Jones T. Theologis A.Submitted (AUG-2001) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. |
| [3] | "Arabidopsis Open Reading Frame (ORF) Clones." Yamada K., Banh J., Chan M.M., Chang C.H., Chang E., Dale J.M., Deng J.M., Goldsmith A.D., Lee J.M., Onodera C.S., Quach H.L., Tang C., Toriumi M., Wu H.C., Yamamura Y., Yu G., Bowser L., Carninci P. Theologis A.Submitted (MAY-2002) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. |
| [4] | EU Arabidopsis sequencing project Submitted (MAR-2000) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. |
| [5] | The Arabidopsis Information Resource (TAIR) Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Columbia. |
| [6] | EU Arabidopsis sequencing project Submitted (FEB-1999) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. |
| [7] | Bevan M., Wedler H., Kutzner M., Wambutt R., Bancroft I., Mewes H.W., Mayer K.F.X., Schueller C. Submitted (FEB-1999) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. |
| [8] | Wedler H., Kutzner M., Wambutt R., Mewes H.W., Lemcke K., Mayer K.F.X. Submitted (MAR-2000) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | AY050989 mRNA. Translation: AAK93666.1. AY113959 mRNA. Translation: AAM45007.1. CP002687 Genomic DNA. Translation: AEE86866.1. AL035538 Genomic DNA. Translation: CAB37544.1. AL161592 Genomic DNA. Translation: CAB80469.1. |
| IPI | IPI00516253. |
| PIR | T05631. |
| RefSeq | NP_195517.1. NM_119965.3. |
| UniGene | At.20178. |
3D structure databases | |
| ProteinModelPortal | Q9SZK4. |
| ModBase | Search... |
Protein family/group databases | |
| CAZy | GT47. Glycosyltransferase Family 47. |
Proteomic databases | |
| PRIDE | Q9SZK4. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| EnsemblPlants | AT4G38040.1; AT4G38040.1; AT4G38040. |
| GeneID | 829960. |
| KEGG | ath:AT4G38040. |
| NMPDR | fig|3702.1.peg.21916. |
Organism-specific databases | |
| TAIR | At4g38040. |
Phylogenomic databases | |
| eggNOG | KOG1021. |
| GeneTree | EPGT00070000029150. |
| HOGENOM | HBG744139. |
| InParanoid | Q9SZK4. |
| OMA | YENMTVI. |
| PhylomeDB | Q9SZK4. |
| ProtClustDB | CLSN2685376. |
Gene expression databases | |
| Genevestigator | Q9SZK4. |
Family and domain databases | |
| InterPro | IPR004263. Exostosin. [Graphical view] |
| Pfam | PF03016. Exostosin. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Entry information
| Entry name | Q9SZK4_ARATH | ||||||||
| Accession | Primary (citable) accession number: Q9SZK4 | ||||||||
| Entry history |
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| Entry status | Unreviewed (UniProtKB/TrEMBL) | ||||||||

Clusters with
