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Unreviewed, UniProtKB/TrEMBL Q9SZK4 (Q9SZK4_ARATH)

Last modified June 16, 2009. Version 35. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · Ontologies · Sequences · References · Cross-references · Entry information

Names and origin

Protein namesSubmitted name:
    Putative uncharacterized protein AT4g38040 EMBL CAB80469.1
Submitted name:
    Putative uncharacterized protein At4g38040 EMBL AAM45007.1
    Putative uncharacterized protein F20D10.160 EMBL CAB37544.1
Gene names
Name: F20D10.160 EMBL CAB37544.1
Synonyms: AT4g38040 EMBL CAB80469.1
Ordered Locus Names: At4g38040 TAIR At4g38040
OrganismArabidopsis thaliana (Mouse-ear cress) [Complete proteome]
Taxonomic identifier3702 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonscore eudicotyledonsrosidseurosids IIBrassicalesBrassicaceaeArabidopsis

Protein attributes

Sequence length425 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existenceEvidence at transcript level.

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Cellular componentmembrane

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q9SZK4-1 [UniParc].

Last modified May 1, 2000. Version 1.
Checksum: 4901B19526B0DB46

FASTA42548,963
        10         20         30         40         50         60 
MTIVKPSQFS FSGGGSSPLC SLKSSLLTVA ILTFISLFYL SLNSLRTSPP SPVIVVTPIH 

        70         80         90        100        110        120 
VPHTFVNEYK TDNETPTMEE ETYSDVYHSP EAFRLNYAEM EKRFKVYIYP DGDPNTFYQT 

       130        140        150        160        170        180 
PRKVTGKYAS EGYFFQNIRE SRFRTLDPDE ADLFFIPISC HKMRGKGTSY ENMTVIVQNY 

       190        200        210        220        230        240 
VDGLIAKYPY WNRTLGADHF FVTCHDVGVR AFEGSPLLIK NTIRVVCSPS YNVGFIPHKD 

       250        260        270        280        290        300 
VALPQVLQPF ALPAGGNDVE NRTTLGFWAG HRNSKIRVIL AHVWENDTEL DISNNRINRA 

       310        320        330        340        350        360 
TGHLVYQKRF YRTKFCICPG GSQVNSARIT DSIHYGCIPV ILSDYYDLPF NDILNWRKFA 

       370        380        390        400        410        420 
VVLREQDVYN LKQILKNIPH SEFVSLHNNL VKVQKHFQWN SPPVKFDAFH MIMYELWLRH 


HVVKY 

« Hide

References

[1]Bevan M., Wedler H., Kutzner M., Wambutt R., Bancroft I., Mewes H.W., Mayer K.F.X., Schueller C.
Submitted (FEB-1999) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[2]EU Arabidopsis sequencing project
Submitted (FEB-1999) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[3]"Arabidopsis Open Reading Frame (ORF) Clones."
Yamada K., Banh J., Chan M.M., Chang C.H., Chang E., Dale J.M., Deng J.M., Goldsmith A.D., Lee J.M., Onodera C.S., Quach H.L., Tang C., Toriumi M., Wu H.C., Yamamura Y., Yu G., Bowser L., Carninci P. expand/collapse author list , Chen H., Cheuk R., Hayashizaki Y., Ishida J., Jones T., Kamiya A., Karlin-Neumann G., Kawai J., Kim C., Lam B., Lin J., Miranda M., Narusaka M., Nguyen M., Palm C.J., Sakurai T., Satou M., Seki M., Shinn P., Southwick A., Shinozaki K., Davis R.W., Ecker J.R., Theologis A.
Submitted (MAY-2002) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[4]"Arabidopsis Full Length cDNA Clones."
Yamada K., Liu S.X., Sakano H., Pham P.K., Banh J., Chung M.K., Goldsmith A.D., Lee J.M., Quach H.L., Toriumi M., Yu G., Bowser L., Carninci P., Chen H., Cheuk R., Hayashizaki Y., Ishida J., Jones T. expand/collapse author list , Kamiya A., Karlin-Neumann G., Kawai J., Kim C., Lam B., Lin J., Miranda M., Narusaka M., Nguyen M., Palm C.J., Sakurai T., Satou M., Seki M., Shinn P., Southwick A., Shinozaki K., Davis R.W., Ecker J.R., Theologis A.
Submitted (AUG-2001) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[5]Wedler H., Kutzner M., Wambutt R., Mewes H.W., Lemcke K., Mayer K.F.X.
Submitted (MAR-2000) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[6]EU Arabidopsis sequencing project
Submitted (MAR-2000) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.

Cross-references

Sequence databases

AY050989 mRNA. Translation: AAK93666.1.
AY113959 mRNA. Translation: AAM45007.1.
AL035538 Genomic DNA. Translation: CAB37544.1.
AL161592 Genomic DNA. Translation: CAB80469.1.
IPIIPI00516253.
PIRT05631.
RefSeqNP_195517.1.
UniGeneAt.20178

3D structure databases

ModBaseSearch...

Protein family/group databases

CAZyGT47. Glycosyltransferase Family 47.

Proteomic databases

PRIDEQ9SZK4.

Genome annotation databases

GeneID829960.
GenomeReviewsGene locus AT4G38040 in contig CT486007_GR.
KEGGath:AT4G38040.
NMPDRfig|3702.1.peg.21916.

Organism-specific databases

TAIRAt4g38040.

Phylogenomic databases

OMAQ9SZK4. TKFCICP.

Family and domain databases

InterProIPR004263. Exostosin.
[Graphical view]
PfamPF03016. Exostosin. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ9SZK4_ARATH
AccessionPrimary (citable) accession number: Q9SZK4
Entry history
Integrated into UniProtKB/TrEMBL: May 1, 2000
Last sequence update: May 1, 2000
Last modified: June 16, 2009
This is version 35 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
Names and origin · Protein attributes · Ontologies · Sequences · References · Cross-references · Entry information