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Unreviewed, UniProtKB/TrEMBL Q9SZK3 (Q9SZK3_ARATH)

Last modified June 16, 2009. Version 34. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · Ontologies · Sequences · References · Cross-references · Entry information

Names and origin

Protein namesSubmitted name:
    LG127/30 like gene EMBL CAB37543.1
Gene names
Name: F20D10.150 EMBL CAB37543.1
Synonyms: AT4g38030 EMBL CAB80468.1
Ordered Locus Names: At4g38030 TAIR At4g38030
OrganismArabidopsis thaliana (Mouse-ear cress) [Complete proteome]
Taxonomic identifier3702 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonscore eudicotyledonsrosidseurosids IIBrassicalesBrassicaceaeArabidopsis

Protein attributes

Sequence length649 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existenceEvidence at transcript level.

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular functioncarbohydrate binding

Inferred from electronic annotation. Source: InterPro

catalytic activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q9SZK3-1 [UniParc].

Last modified May 1, 2000. Version 1.
Checksum: D4A530AF995A37DD

FASTA64974,459
        10         20         30         40         50         60 
MVSQKKIASL FICFLLLLLL PLSFSKPTRN LDGISARAPT VQQIRSRHHG TREVIVDNGI 

        70         80         90        100        110        120 
IRVSFSNPQG LITGIKYKGI DNVLHPHLRD RGIEGTNFRI ITQTQEQVEI SFSRTWEDGH 

       130        140        150        160        170        180 
IPLNVDKRYI IRRNTSGIYM YGIFERLPEW PELDMGLIRI AFKLNPERFH YMAVADNRQR 

       190        200        210        220        230        240 
EMPTEDDRDI KRGHAKALGY KEAVQLTHPH NSMFKNQVDD KYQYTCEIKD NKVHGWISTK 

       250        260        270        280        290        300 
SRVGFWIISP SGEYRSGGPI KQELTSHVGP TAITTFISGH YVGADMEAHY RPGEAWKKVL 

       310        320        330        340        350        360 
GPVFIYLNSD STSNNKPQDL LWEDAKQQSE KEVKAWPYDF VASSDYLSRR ERGSVTGRLL 

       370        380        390        400        410        420 
VNDRFLTPGK SAYVGLAPPG EAGSWQTNTK GYQFWTKTNE TGYFTIENVR PGTYNLYGWV 

       430        440        450        460        470        480 
PGFIGDFRYQ NLVNVAAGSV ISLGRVVYKP PRNGPTLWEI GVPDRTAREY FIPEPYKDTM 

       490        500        510        520        530        540 
NPLYLNHTDK FRQYGLWQRY TELYPTHDLV YTVGVSNYSQ DWFYAQVTRK TGDLTYVPTI 

       550        560        570        580        590        600 
WQIVFHLPYV NSRGSYTLQV ALASAAWANL QVRINNQNSW PFFSTGTIGK DNAIARHGIH 

       610        620        630        640 
GMYRLYTIDV PGRLLRTGTN TIYLRQPKAQ GPFEGLMYDY IRLEEPSRA 

« Hide

References

[1]Bevan M., Wedler H., Kutzner M., Wambutt R., Bancroft I., Mewes H.W., Mayer K.F.X., Schueller C.
Submitted (FEB-1999) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[2]EU Arabidopsis sequencing project
Submitted (FEB-1999) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[3]Wedler H., Kutzner M., Wambutt R., Mewes H.W., Lemcke K., Mayer K.F.X.
Submitted (MAR-2000) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[4]EU Arabidopsis sequencing project
Submitted (MAR-2000) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.

Cross-references

Sequence databases

AL035538 Genomic DNA. Translation: CAB37543.1.
AL161592 Genomic DNA. Translation: CAB80468.1.
IPIIPI00526557.
PIRT05630.

3D structure databases

ModBaseSearch...

Protein family/group databases

CAZyPL4. Polysaccharide Lyase Family 4.

Genome annotation databases

NMPDRfig|3702.1.peg.21915.

Organism-specific databases

TAIRAt4g38030.

Phylogenomic databases

OMAQ9SZK3. KRLVMLK.

Gene expression databases

ArrayExpressQ9SZK3.

Family and domain databases

InterProIPR010325. Rhamnogal_lyase.
[Graphical view]
PfamPF06045. Rhamnogal_lyase. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ9SZK3_ARATH
AccessionPrimary (citable) accession number: Q9SZK3
Entry history
Integrated into UniProtKB/TrEMBL: May 1, 2000
Last sequence update: May 1, 2000
Last modified: June 16, 2009
This is version 34 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
Names and origin · Protein attributes · Ontologies · Sequences · References · Cross-references · Entry information