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Q9SZJ8 (Q9SZJ8_ARATH) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 40. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names

Putative uncharacterized protein F20D10.80 EMBL CAB37536.1
Gene names
Name:F20D10.80 EMBL CAB37536.1
Synonyms:AT4g37960 EMBL CAB80461.1
OrganismArabidopsis thaliana (Mouse-ear cress) EMBL CAB37536.1
Taxonomic identifier3702 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonscore eudicotyledonsrosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis

Protein attributes

Sequence length289 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

Ontologies

Gene Ontology (GO)
   Molecular functioncarbohydrate binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q9SZJ8 [UniParc].

Last modified May 1, 2000. Version 1.
Checksum: C0BFFE6AF7EEF554

FASTA28933,385
        10         20         30         40         50         60 
MQKRVIFVMR FVKQIYCYFH ATQYISSGYQ FWTRADKMGM FTIANVRPGT YSLYAWVSGF 

        70         80         90        100        110        120 
IGDYKYVRDI TITPGREIDV GHIVYVPPRN GPTLWEIGQP DRTAAEFYIP DPDPTLFTKL 

       130        140        150        160        170        180 
YLNYSNPQDR FRQYGLWDRY SVLYPRNDLV FTAGVSDYKK DWFYAHVNRK AGNGTYKATT 

       190        200        210        220        230        240 
WQIKFNLKAV IQTRIYTLRI ALAAASTIDL LVWVNEVDSK PLFITGLIGR DNAIARHGIH 

       250        260        270        280 
GLYKLYNIDV HGKLLRVGNN TIFLTHGRNS DSFSGVMYDY LRLEGPSGV 

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References

[1]Bevan M., Wedler H., Kutzner M., Wambutt R., Bancroft I., Mewes H.W., Mayer K.F.X., Schueller C.
Submitted (FEB-1999) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[2]EU Arabidopsis sequencing project
Submitted (FEB-1999) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[3]Wedler H., Kutzner M., Wambutt R., Mewes H.W., Lemcke K., Mayer K.F.X.
Submitted (MAR-2000) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[4]EU Arabidopsis sequencing project
Submitted (MAR-2000) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AL035538 Genomic DNA. Translation: CAB37536.1.
AL161592 Genomic DNA. Translation: CAB80461.1.
IPIIPI00529682.
PIRT05623.

3D structure databases

ProteinModelPortalQ9SZJ8.
ModBaseSearch...

Protein family/group databases

CAZyPL4. Polysaccharide Lyase Family 4.

Proteomic databases

PRIDEQ9SZJ8.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Phylogenomic databases

GeneTreeEPGT00050000014513.
PhylomeDBQ9SZJ8.

Gene expression databases

ArrayExpressQ9SZJ8.
GenevestigatorQ9SZJ8.

Family and domain databases

InterProIPR013784. Carb-bd-like_fold.
IPR008979. Galactose-bd-like.
[Graphical view]
SUPFAMSSF49452. CBD_4. 1 hit.
SSF49785. Gal_bind_like. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ9SZJ8_ARATH
AccessionPrimary (citable) accession number: Q9SZJ8
Entry history
Integrated into UniProtKB/TrEMBL: May 1, 2000
Last sequence update: May 1, 2000
Last modified: December 14, 2011
This is version 40 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)