Q9SZG1 (GT6_ARATH) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Glycosyltransferase 6
Short name=AtGT6
EC=2.4.-.-

Gene names

Name:	GT6
Ordered Locus Names:	At4g37690
ORF Names:	F19F18.180

Organism

Arabidopsis thaliana (Mouse-ear cress)

Taxonomic identifier

3702 [NCBI]

Taxonomic lineage

Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › malvids › Brassicales › Brassicaceae › Camelineae › Arabidopsis

Protein attributes

Sequence length	432 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

General annotation (Comments)

Subcellular location	Golgi apparatus membrane; Single-pass type II membrane protein Potential.
Sequence similarities	Belongs to the glycosyltransferase 34 family.

Ontologies

Keywords
Cellular component	Golgi apparatus Membrane
Domain	Signal-anchor Transmembrane Transmembrane helix
Molecular function	Glycosyltransferase Transferase
PTM	Glycoprotein
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Cellular component	Golgi membrane Inferred from electronic annotation. Source: UniProtKB-SubCell integral to membrane Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	transferase activity, transferring hexosyl groups Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 432	432	Glycosyltransferase 6		PRO_0000215174
Regions
	Topological domain	1 – 18	18	Cytoplasmic Potential
	Transmembrane	19 – 39	21	Helical; Signal-anchor for type II membrane protein; Potential
	Topological domain	40 – 432	393	Lumenal Potential
Amino acid modifications
	Glycosylation	315	1	N-linked (GlcNAc...) Potential
Experimental info
	Sequence conflict	393	1	I → T in BT015600. Ref.3

Sequences

	Sequence		Length	Mass (Da)
	Q9SZG1 [UniParc]. Last modified May 1, 2000. Version 1. Checksum: 3BBA5F10B196BB7C	FASTA	432	50,295
	10 20 30 40 50 60 MGKPGGAKTR TAVCLSDGVF FLAGAFMSLT LVWSYFSIFS PSFTSLRHDG KPVQCSGLDM 70 80 90 100 110 120 QFDPSEPGFY DDPDLSYSIE KPITKWDEKR NQWFESHPSF KPGSENRIVM VTGSQSSPCK 130 140 150 160 170 180 NPIGDHLLLR CFKNKVDYAR IHGHDIFYSN SLLHPKMNSY WAKLPVVKAA MLAHPEAEWI 190 200 210 220 230 240 WWVDSDAIFT DMEFKPPLHR YRQHNLVVHG WPNIIYEKQS WTALNAGVFL IRNCQWSMDL 250 260 270 280 290 300 IDTWKSMGPV SPDYKKWGPI QRSIFKDKLF PESDDQTALI YLLYKHKELY YPKIYLEAEY 310 320 330 340 350 360 YLQGYWIGVF GDFANVTERY LEMEREDDTL RRRHAEKVSE RYGAFREERF LKGEFGGRGS 370 380 390 400 410 420 RRRAFITHFT GCQPCSGDHN PSYDGDTCWN EMIRALNFAD NQVMRVYGYV HSDLSKTSPL 430 QPLPFDYPNE AW

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana." Mayer K.F.X., Schueller C., Wambutt R., Murphy G., Volckaert G., Pohl T., Duesterhoeft A., Stiekema W., Entian K.-D., Terryn N., Harris B., Ansorge W., Brandt P., Grivell L.A., Rieger M., Weichselgartner M., de Simone V., Obermaier B. , Mache R., Mueller M., Kreis M., Delseny M., Puigdomenech P., Watson M., Schmidtheini T., Reichert B., Portetelle D., Perez-Alonso M., Boutry M., Bancroft I., Vos P., Hoheisel J., Zimmermann W., Wedler H., Ridley P., Langham S.-A., McCullagh B., Bilham L., Robben J., van der Schueren J., Grymonprez B., Chuang Y.-J., Vandenbussche F., Braeken M., Weltjens I., Voet M., Bastiaens I., Aert R., Defoor E., Weitzenegger T., Bothe G., Ramsperger U., Hilbert H., Braun M., Holzer E., Brandt A., Peters S., van Staveren M., Dirkse W., Mooijman P., Klein Lankhorst R., Rose M., Hauf J., Koetter P., Berneiser S., Hempel S., Feldpausch M., Lamberth S., Van den Daele H., De Keyser A., Buysshaert C., Gielen J., Villarroel R., De Clercq R., van Montagu M., Rogers J., Cronin A., Quail M.A., Bray-Allen S., Clark L., Doggett J., Hall S., Kay M., Lennard N., McLay K., Mayes R., Pettett A., Rajandream M.A., Lyne M., Benes V., Rechmann S., Borkova D., Bloecker H., Scharfe M., Grimm M., Loehnert T.-H., Dose S., de Haan M., Maarse A.C., Schaefer M., Mueller-Auer S., Gabel C., Fuchs M., Fartmann B., Granderath K., Dauner D., Herzl A., Neumann S., Argiriou A., Vitale D., Liguori R., Piravandi E., Massenet O., Quigley F., Clabauld G., Muendlein A., Felber R., Schnabl S., Hiller R., Schmidt W., Lecharny A., Aubourg S., Chefdor F., Cooke R., Berger C., Monfort A., Casacuberta E., Gibbons T., Weber N., Vandenbol M., Bargues M., Terol J., Torres A., Perez-Perez A., Purnelle B., Bent E., Johnson S., Tacon D., Jesse T., Heijnen L., Schwarz S., Scholler P., Heber S., Francs P., Bielke C., Frishman D., Haase D., Lemcke K., Mewes H.-W., Stocker S., Zaccaria P., Bevan M., Wilson R.K., de la Bastide M., Habermann K., Parnell L., Dedhia N., Gnoj L., Schutz K., Huang E., Spiegel L., Sekhon M., Murray J., Sheet P., Cordes M., Abu-Threideh J., Stoneking T., Kalicki J., Graves T., Harmon G., Edwards J., Latreille P., Courtney L., Cloud J., Abbott A., Scott K., Johnson D., Minx P., Bentley D., Fulton B., Miller N., Greco T., Kemp K., Kramer J., Fulton L., Mardis E., Dante M., Pepin K., Hillier L.W., Nelson J., Spieth J., Ryan E., Andrews S., Geisel C., Layman D., Du H., Ali J., Berghoff A., Jones K., Drone K., Cotton M., Joshu C., Antonoiu B., Zidanic M., Strong C., Sun H., Lamar B., Yordan C., Ma P., Zhong J., Preston R., Vil D., Shekher M., Matero A., Shah R., Swaby I.K., O'Shaughnessy A., Rodriguez M., Hoffman J., Till S., Granat S., Shohdy N., Hasegawa A., Hameed A., Lodhi M., Johnson A., Chen E., Marra M.A., Martienssen R., McCombie W.R. Nature 402:769-777(1999) [PubMed: 10617198] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Columbia.
[2]	The Arabidopsis Information Resource (TAIR) Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases Cited for: GENOME REANNOTATION. Strain: cv. Columbia.
[3]	Center for eukaryotic structural genomics (CESG) Submitted (SEP-2004) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 35-432.
[4]	"An Arabidopsis gene encoding an alpha-xylosyltransferase involved in xyloglucan biosynthesis." Faik A., Price N.J., Raikhel N.V., Keegstra K. Proc. Natl. Acad. Sci. U.S.A. 99:7797-7802(2002) [PubMed: 12032363] [Abstract] Cited for: GENE FAMILY, NOMENCLATURE.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AL035605 Genomic DNA. Translation: CAB38308.1. AL161592 Genomic DNA. Translation: CAB80434.1. CP002687 Genomic DNA. Translation: AEE86828.1. BT015600 mRNA. No translation available.
IPI	IPI00523291.
PIR	T04726.
RefSeq	NP_680773.1. NM_148407.3.
UniGene	At.45313.
3D structure databases
ProteinModelPortal	Q9SZG1.
ModBase	Search...
Protein family/group databases
CAZy	GT34. Glycosyltransferase Family 34.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblPlants	AT4G37690.1; AT4G37690.1; AT4G37690.
GeneID	829924.
GenomeReviews	Gene locus AT4G37690 in contig CT486007_GR.
KEGG	ath:AT4G37690.
NMPDR	fig|3702.1.peg.21881.
Organism-specific databases
TAIR	At4g37690.
Phylogenomic databases
GeneTree	EPGT00070000029034.
HOGENOM	HBG319799.
InParanoid	Q9SZG1.
OMA	GAFREER.
PhylomeDB	Q9SZG1.
ProtClustDB	PLN03181.
Gene expression databases
Genevestigator	Q9SZG1.
Family and domain databases
InterPro	IPR008630. Glyco_trans_34. [Graphical view]
Pfam	PF05637. Glyco_transf_34. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

GT6_ARATH

Accession

Primary (citable) accession number: Q9SZG1

Entry history

Integrated into UniProtKB/Swiss-Prot:	April 26, 2004
Last sequence update:	May 1, 2000
Last modified:	December 14, 2011
This is version 67 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Plant Protein Annotation Program