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Protein

Uncharacterized oxidoreductase At4g09670

Gene

At4g09670

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Oxidoreductase

Enzyme and pathway databases

BioCyciARA:AT4G09670-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized oxidoreductase At4g09670 (EC:1.-.-.-)
Gene namesi
Ordered Locus Names:At4g09670
ORF Names:F17A8.20
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 4

Organism-specific databases

TAIRiAT4G09670.

Subcellular locationi

GO - Cellular componenti

  • cytosol Source: TAIR
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Initiator methionineiRemovedCombined sources
ChainiPRO_00000917882 – 362Uncharacterized oxidoreductase At4g09670Add BLAST361

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei2N-acetylalanineCombined sources1

Keywords - PTMi

Acetylation

Proteomic databases

PaxDbiQ9SZ83.
PRIDEiQ9SZ83.

PTM databases

iPTMnetiQ9SZ83.

Expressioni

Gene expression databases

GenevisibleiQ9SZ83. AT.

Interactioni

Subunit structurei

Homodimer.Curated

Protein-protein interaction databases

STRINGi3702.AT4G09670.1.

Structurei

Secondary structure

1362
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Beta strandi7 – 13Combined sources7
Helixi18 – 27Combined sources10
Beta strandi31 – 37Combined sources7
Helixi41 – 50Combined sources10
Beta strandi58 – 62Combined sources5
Helixi63 – 68Combined sources6
Beta strandi74 – 77Combined sources4
Helixi81 – 83Combined sources3
Helixi84 – 92Combined sources9
Turni93 – 95Combined sources3
Beta strandi97 – 100Combined sources4
Beta strandi105 – 107Combined sources3
Helixi108 – 119Combined sources12
Turni120 – 122Combined sources3
Beta strandi125 – 127Combined sources3
Helixi131 – 133Combined sources3
Helixi135 – 137Combined sources3
Turni138 – 142Combined sources5
Helixi143 – 145Combined sources3
Turni147 – 150Combined sources4
Beta strandi152 – 163Combined sources12
Helixi166 – 171Combined sources6
Helixi173 – 175Combined sources3
Helixi183 – 187Combined sources5
Helixi189 – 199Combined sources11
Turni200 – 202Combined sources3
Beta strandi206 – 210Combined sources5
Beta strandi222 – 230Combined sources9
Beta strandi232 – 234Combined sources3
Beta strandi236 – 264Combined sources29
Beta strandi273 – 281Combined sources9
Beta strandi288 – 293Combined sources6
Beta strandi296 – 301Combined sources6
Helixi306 – 314Combined sources9
Turni322 – 324Combined sources3
Helixi332 – 351Combined sources20
Turni352 – 354Combined sources3

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1YDWX-ray2.49A/B2-362[»]
2Q4EX-ray2.49A/B2-362[»]
ProteinModelPortaliQ9SZ83.
SMRiQ9SZ83.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ9SZ83.

Family & Domainsi

Sequence similaritiesi

Belongs to the Gfo/Idh/MocA family.Curated

Phylogenomic databases

eggNOGiKOG2741. Eukaryota.
COG0673. LUCA.
HOGENOMiHOG000227440.
InParanoidiQ9SZ83.
OMAiNIAWRAW.
OrthoDBiEOG09360EH0.
PhylomeDBiQ9SZ83.

Family and domain databases

Gene3Di3.40.50.720. 1 hit.
InterProiIPR016040. NAD(P)-bd_dom.
IPR000683. Oxidoreductase_N.
[Graphical view]
PfamiPF01408. GFO_IDH_MocA. 1 hit.
[Graphical view]
SUPFAMiSSF51735. SSF51735. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q9SZ83-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MATETQIRIG VMGCADIARK VSRAIHLAPN ATISGVASRS LEKAKAFATA
60 70 80 90 100
NNYPESTKIH GSYESLLEDP EIDALYVPLP TSLHVEWAIK AAEKGKHILL
110 120 130 140 150
EKPVAMNVTE FDKIVDACEA NGVQIMDGTM WVHNPRTALL KEFLSDSERF
160 170 180 190 200
GQLKTVQSCF SFAGDEDFLK NDIRVKPGLD GLGALGDAGW YAIRATLLAN
210 220 230 240 250
NFELPKTVTA FPGAVLNEAG VILSCGASLS WEDGRTATIY CSFLANLTME
260 270 280 290 300
ITAIGTKGTL RVHDFIIPYK ETEASFTTST KAWFNDLVTA WVSPPSEHTV
310 320 330 340 350
KTELPQEACM VREFARLVGE IKNNGAKPDG YWPSISRKTQ LVVDAVKESV
360
DKNYQQISLS GR
Length:362
Mass (Da):39,562
Last modified:May 1, 2000 - v1
Checksum:iEC2595BE6C53AACC
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti173I → M in BAD94240 (Ref. 5) Curated1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL049482 Genomic DNA. Translation: CAB39634.1.
AL161515 Genomic DNA. Translation: CAB78090.1.
CP002687 Genomic DNA. Translation: AEE82779.1.
BT002355 mRNA. Translation: AAN86188.1.
AY045851 mRNA. Translation: AAK76525.2.
AY085911 mRNA. Translation: AAM63123.1.
AK220867 mRNA. Translation: BAD94240.1.
PIRiT04014.
RefSeqiNP_192705.1. NM_117035.4.
UniGeneiAt.23812.

Genome annotation databases

EnsemblPlantsiAT4G09670.1; AT4G09670.1; AT4G09670.
GeneIDi826553.
GrameneiAT4G09670.1; AT4G09670.1; AT4G09670.
KEGGiath:AT4G09670.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL049482 Genomic DNA. Translation: CAB39634.1.
AL161515 Genomic DNA. Translation: CAB78090.1.
CP002687 Genomic DNA. Translation: AEE82779.1.
BT002355 mRNA. Translation: AAN86188.1.
AY045851 mRNA. Translation: AAK76525.2.
AY085911 mRNA. Translation: AAM63123.1.
AK220867 mRNA. Translation: BAD94240.1.
PIRiT04014.
RefSeqiNP_192705.1. NM_117035.4.
UniGeneiAt.23812.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1YDWX-ray2.49A/B2-362[»]
2Q4EX-ray2.49A/B2-362[»]
ProteinModelPortaliQ9SZ83.
SMRiQ9SZ83.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi3702.AT4G09670.1.

PTM databases

iPTMnetiQ9SZ83.

Proteomic databases

PaxDbiQ9SZ83.
PRIDEiQ9SZ83.

Protocols and materials databases

DNASUi826553.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT4G09670.1; AT4G09670.1; AT4G09670.
GeneIDi826553.
GrameneiAT4G09670.1; AT4G09670.1; AT4G09670.
KEGGiath:AT4G09670.

Organism-specific databases

TAIRiAT4G09670.

Phylogenomic databases

eggNOGiKOG2741. Eukaryota.
COG0673. LUCA.
HOGENOMiHOG000227440.
InParanoidiQ9SZ83.
OMAiNIAWRAW.
OrthoDBiEOG09360EH0.
PhylomeDBiQ9SZ83.

Enzyme and pathway databases

BioCyciARA:AT4G09670-MONOMER.

Miscellaneous databases

EvolutionaryTraceiQ9SZ83.
PROiQ9SZ83.

Gene expression databases

GenevisibleiQ9SZ83. AT.

Family and domain databases

Gene3Di3.40.50.720. 1 hit.
InterProiIPR016040. NAD(P)-bd_dom.
IPR000683. Oxidoreductase_N.
[Graphical view]
PfamiPF01408. GFO_IDH_MocA. 1 hit.
[Graphical view]
SUPFAMiSSF51735. SSF51735. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiY4967_ARATH
AccessioniPrimary (citable) accession number: Q9SZ83
Secondary accession number(s): Q56ZU4, Q94AR5
Entry historyi
Integrated into UniProtKB/Swiss-Prot: August 30, 2005
Last sequence update: May 1, 2000
Last modified: November 30, 2016
This is version 106 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  3. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.