Q9SYE3 (Q9SYE3_ARATH) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative xylan endohydrolase EMBL AAD27896.1

Gene names

Name:	F9M13.1 EMBL AAD27896.1
Synonyms:	AT4g08160 EMBL CAB81152.1

Organism

Arabidopsis thaliana (Mouse-ear cress) EMBL AAD27896.1

Taxonomic identifier

3702 [NCBI]

Taxonomic lineage

Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › malvids › Brassicales › Brassicaceae › Camelineae › Arabidopsis

Protein attributes

Sequence length	520 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

General annotation (Comments)

Sequence similarities

Belongs to the glycosyl hydrolase 10 (cellulase F) family. RuleBase RU003432

Ontologies

Keywords
Molecular function	Glycosidase RuleBase RU003432 Hydrolase
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	cation binding Inferred from electronic annotation. Source: InterPro hydrolase activity, hydrolyzing O-glycosyl compounds Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q9SYE3 [UniParc]. Last modified May 1, 2000. Version 1. Checksum: 156E44E3F5787355	FASTA	520	58,673
	10 20 30 40 50 60 MARDTLGPHK PLGGNYIVVT NRTQTWMGPA QMITDKIKLF LTYQISAWVK LGVGVSGSSM 70 80 90 100 110 120 SPQNVNIALS VDNQWVNGGQ VEVTVGDTWH EIAGSFRLEK QPQNVMVYVQ GPGAGIDLMI 130 140 150 160 170 180 AALQIFPVDR RERVRCLKRQ VDEVRKRDIV LKFSGLNDDE SFDLFPYIVK VKQTYNSFPV 190 200 210 220 230 240 GTCINRTDID NEDFVDFFTK NFNWAVFGNE LKWYATEAER GKVNYQDADD MLDLCIGNNI 250 260 270 280 290 300 NVRGHCIFWE VESTVQPWVR QLNKTDLMNA VQKRLTDLLT RYKGKFKHYD VNNEMLHGSF 310 320 330 340 350 360 YQDRLGKGVR ALMFNIAHKL DPSPLLFVND YHVEDGDDPR SSPEKYIKLV LDLEAQGATV 370 380 390 400 410 420 GGIGIQGHID SPVGAIVCSA LDMLSVLGRP IWFTELDVSS SNEYVRGEDL EVMLWEAFAH 430 440 450 460 470 480 PSVEGIMLWG FWELSMSREN ANLVEGEGEV NEAGKRFLEV KQEWLSHAYG IINDESEFTF 490 500 510 520 RGYHGTYAVE ICTPAGIVLK TFVVEKGDTP LVISIDLSSL

References

[1]	EU Arabidopsis sequencing project Submitted (MAR-2000) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.
[2]	"Arabidopsis thaliana BAC F9M13 from chromosome IV near 21 cM." Spiegel L.A., Nascimento L., de la Bastide M., Habermann K., O'Shaughnessy A., Rodriguez M., Matero A., Shah R., Swaby I., Vil M.D., Shekher M., Preston R., Schutz K., See L.H., Huang E.N., Dedhia N.N., Parnell L.D., McCombie W.R. Submitted (JAN-1999) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.
[3]	Parnell L.D. Submitted (APR-1999) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.
[4]	Spiegel L.A., Huang E.N., Nascimento L.U., de la Bastide M., Vil D.M., Preston R.R., Matero A., Shah R., O'Shaughnessy A., Rodriguez M., Shekher M., Schutz K., See L.H., Swaby I., Habermann K., Dedhia N.N., Mewes H.W., Lemcke K., Mayer K.F.X. Submitted (MAR-2000) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AC006267 Genomic DNA. Translation: AAD27896.1. AL161510 Genomic DNA. Translation: CAB81152.1.
IPI	IPI00517949.
PIR	E85080.
3D structure databases
HSSP	HSSP built from PDB template 1I1W based on UniProtKB P23360.
ProteinModelPortal	Q9SYE3.
SMR	Q9SYE3. Positions 175-461.
ModBase	Search...
Protein family/group databases
CAZy	CBM22. Carbohydrate-Binding Module Family 22. GH10. Glycoside Hydrolase Family 10.
Proteomic databases
PRIDE	Q9SYE3.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Phylogenomic databases
GeneTree	EPGT00070000030514.
Gene expression databases
ArrayExpress	Q9SYE3.
Genevestigator	Q9SYE3.
Family and domain databases
InterPro	IPR003305. CenC_carb-bd. IPR008979. Galactose-bd-like. IPR001000. Glyco_hydro_10. IPR013781. Glyco_hydro_subgr_catalytic. IPR017853. Glycoside_hydrolase_SF. [Graphical view]
Gene3D	G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
Pfam	PF02018. CBM_4_9. 1 hit. PF00331. Glyco_hydro_10. 1 hit. [Graphical view]
PRINTS	PR00134. GLHYDRLASE10.
SMART	SM00633. Glyco_10. 1 hit. [Graphical view]
SUPFAM	SSF49785. Gal_bind_like. 1 hit. SSF51445. Glyco_hydro_cat. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q9SYE3_ARATH

Accession

Primary (citable) accession number: Q9SYE3

Entry history

Integrated into UniProtKB/TrEMBL:	May 1, 2000
Last sequence update:	May 1, 2000
Last modified:	November 16, 2011
This is version 64 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)