Unreviewed, UniProtKB/TrEMBL Q9SXJ1 (Q9SXJ1_ARAGE)

Names and origin

Protein names

Submitted name:
    Basic endochitinase EMBL BAA82826.1

Gene names

Name:

ChiB EMBL BAA82826.1

Organism

Arabis gemmifera EMBL BAA82826.1

Taxonomic identifier

63677 [NCBI]

Taxonomic lineage

Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › eurosids II › Brassicales › Brassicaceae › Arabidopsis

Protein attributes

Sequence length	335 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Predicted.

General annotation (Comments)

Sequence similarities

Contains 1 chitin-binding type-1 domain. RuleBase RU000410V1

Ontologies

Keywords
Ligand	Chitin-binding RuleBase RU000410V1 Spearmint SPM018371
Gene Ontology (GO)
Biological process	cell wall macromolecule catabolic process Inferred from electronic annotation. Source: InterPro chitin catabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	chitin binding Inferred from electronic annotation. Source: InterPro chitinase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q9SXJ1-1 [UniParc]. Last modified May 1, 2000. Version 1. Checksum: 769694ED37195B37	FASTA	335	36,041
	10 20 30 40 50 60 MPSKKEYHKT LNKMKTNLFL FLIFSLLLSF SSAEQCGRQA GGALCPNGLC CSEFGWCGNT 70 80 90 100 110 120 EPYCKQPGSQ SQCTPGGTPP GPTGDLSGII SSSQFDDMLK HRSDAACPAR GFYTYDAFIT 130 140 150 160 170 180 AAKSFPGFGT TGDTATRKKE VAAFFGQTSH ETTGGWASAP DGPFSWGYCF RQEQNPGSDY 190 200 210 220 230 240 CEPSATWPCA SGKRYYGRGP MQLTWNYNYG LCGRAIGVDL LNNPDLVAND AVIAFKAAIW 250 260 270 280 290 300 FWMTAQPPKP SCHAVIAGQW QPSAADLAAG RLPGYGVITN IINGGLECGR GQDGRVADRI 310 320 330 GFYQRYCNIF GVNPGGNLDC YNQRSFGNGL LNAAI

References

[1]	"DNA variation in the basic chitinase locus (ChiB) region of the wild plant Arabidopsis thaliana." Kawabe A., Miyashita N.T. Submitted (FEB-1999) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: Ashibi 56 EMBL BAA82826.1.

Cross-references

Sequence databases
EMBLGenBankDDBJ	AB023464 Genomic DNA. Translation: BAA82826.1.
3D structure databases
HSSP	HSSP built from PDB template 2BAA based on UniProtKB P23951.
ModBase	Search...
Protein family/group databases
CAZy	CBM18. Carbohydrate-Binding Module Family 18. GH19. Glycoside Hydrolase Family 19.
Family and domain databases
InterPro	IPR018371. Chitin-binding_1_CS. IPR001002. Chitin_bd_1. IPR016283. Glyco_hydro_19. IPR000726. Glyco_hydro_19_cat. [Graphical view]
Gene3D	G3DSA:3.30.60.10. Chitin_bd_1. 1 hit.
PANTHER	PTHR22595. Glyco_hydro_19_cat. 1 hit.
Pfam	PF00187. Chitin_bind_1. 1 hit. PF00182. Glyco_hydro_19. 1 hit. [Graphical view]
PIRSF	PIRSF001060. Endochitinase. 1 hit.
PRINTS	PR00451. CHITINBINDNG.
ProDom	PD000609. Chitin_binding_1. 1 hit. PD354900. Glyco_hydro_19. 1 hit. [Graphical view] [Entries sharing at least one domain]
SMART	SM00270. ChtBD1. 1 hit. [Graphical view]
PROSITE	PS00026. CHIT_BIND_I_1. 1 hit. PS50941. CHIT_BIND_I_2. 1 hit. PS00773. CHITINASE_19_1. 1 hit. PS00774. CHITINASE_19_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q9SXJ1_ARAGE

Accession

Primary (citable) accession number: Q9SXJ1

Entry history

Integrated into UniProtKB/TrEMBL:	May 1, 2000
Last sequence update:	May 1, 2000
Last modified:	April 14, 2009
This is version 39 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)